RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	MAGEC2	Q9UBF1	373 aa	Predicted RBP	13.52	□□□□□ -0.25
FDPS-204	ENST00000461507	MAGED2	Q9UNF1	606 aa	Predicted RBP	13.52	□□□□□ -0.25
FDPS-204	ENST00000461507	SMG5	Q9UPR3	1016 aa	Known RBP	13.52	□□□□□ -0.25
FDPS-204	ENST00000461507	UTP18	Q9Y5J1	556 aa	Known RBP eCLIP	13.52	□□□□□ -0.25
FDPS-204	ENST00000461507	MYO16	Q9Y6X6	1858 aa		13.51	□□□□□ -0.25
FDPS-204	ENST00000461507	PES1	O00541	588 aa	Known RBP	13.51	□□□□□ -0.25
FDPS-204	ENST00000461507	TACC1	O75410	805 aa		13.51	□□□□□ -0.25
FDPS-204	ENST00000461507	ASS1	P00966	412 aa	Known RBP	13.51	□□□□□ -0.25
FDPS-204	ENST00000461507	FAM163B	P0C2L3	166 aa		13.51	□□□□□ -0.25
FDPS-204	ENST00000461507	ANXA13	P27216	316 aa		13.51	□□□□□ -0.25
FDPS-204	ENST00000461507	AVPR1A	P37288	418 aa		13.51	□□□□□ -0.25
FDPS-204	ENST00000461507	MTIF2	P46199	727 aa	Known RBP	13.51	□□□□□ -0.25
FDPS-204	ENST00000461507	KPNA1	P52294	538 aa	Predicted RBP	13.51	□□□□□ -0.25
FDPS-204	ENST00000461507	ENPEP	Q07075	957 aa		13.51	□□□□□ -0.25
FDPS-204	ENST00000461507	USP4	Q13107	963 aa		13.51	□□□□□ -0.25
FDPS-204	ENST00000461507	PPP2R5D	Q14738	602 aa		13.51	□□□□□ -0.25
FDPS-204	ENST00000461507	MAPRE1	Q15691	268 aa	Known RBP	13.51	□□□□□ -0.25
FDPS-204	ENST00000461507	DDR2	Q16832	855 aa		13.51	□□□□□ -0.25
FDPS-204	ENST00000461507	ITPRIPL2	Q3MIP1	535 aa		13.51	□□□□□ -0.25
FDPS-204	ENST00000461507	CBWD6	Q4V339	395 aa		13.51	□□□□□ -0.25
FDPS-204	ENST00000461507	CBWD3	Q5JTY5	395 aa		13.51	□□□□□ -0.25
FDPS-204	ENST00000461507	CBWD5	Q5RIA9	395 aa		13.51	□□□□□ -0.25
FDPS-204	ENST00000461507	CAVIN1	Q6NZI2	390 aa	Known RBP	13.51	□□□□□ -0.25
FDPS-204	ENST00000461507	VSTM1	Q6UX27	236 aa		13.51	□□□□□ -0.25
FDPS-204	ENST00000461507	ERMP1	Q7Z2K6	904 aa		13.51	□□□□□ -0.25
FDPS-204	ENST00000461507	SYNPO	Q8N3V7	929 aa		13.51	□□□□□ -0.25
FDPS-204	ENST00000461507	STKLD1	Q8NE28	680 aa		13.51	□□□□□ -0.25
FDPS-204	ENST00000461507	RIN3	Q8TB24	985 aa		13.51	□□□□□ -0.25
FDPS-204	ENST00000461507	MRPS31	Q92665	395 aa	Known RBP	13.51	□□□□□ -0.25
FDPS-204	ENST00000461507	CHFR	Q96EP1	664 aa		13.51	□□□□□ -0.25
FDPS-204	ENST00000461507	CNOT6L	Q96LI5	555 aa	Known RBP	13.51	□□□□□ -0.25
FDPS-204	ENST00000461507	SMG9	Q9H0W8	520 aa	Known RBP	13.51	□□□□□ -0.25
FDPS-204	ENST00000461507	SDCBP2	Q9H190	292 aa		13.51	□□□□□ -0.25
FDPS-204	ENST00000461507	CRTAC1	Q9NQ79	661 aa		13.51	□□□□□ -0.25
FDPS-204	ENST00000461507	HPS4	Q9NQG7	708 aa		13.51	□□□□□ -0.25
FDPS-204	ENST00000461507	THG1L	Q9NWX6	298 aa	Known RBP	13.51	□□□□□ -0.25
FDPS-204	ENST00000461507	RAB20	Q9NX57	234 aa		13.51	□□□□□ -0.25
FDPS-204	ENST00000461507	CCL26	Q9Y258	94 aa		13.51	□□□□□ -0.25
FDPS-204	ENST00000461507	ATP8B3	O60423	1300 aa		13.5	□□□□□ -0.25
FDPS-204	ENST00000461507	TCF3	P15923	654 aa		13.5	□□□□□ -0.25
FDPS-204	ENST00000461507	PTPN1	P18031	435 aa	Known RBP	13.5	□□□□□ -0.25
FDPS-204	ENST00000461507	BDNF	P23560	247 aa		13.5	□□□□□ -0.25
FDPS-204	ENST00000461507	HOXA6	P31267	233 aa		13.5	□□□□□ -0.25
FDPS-204	ENST00000461507	GRIK1	P39086	918 aa		13.5	□□□□□ -0.25
FDPS-204	ENST00000461507	ASPA	P45381	313 aa		13.5	□□□□□ -0.25
FDPS-204	ENST00000461507	ID4	P47928	161 aa		13.5	□□□□□ -0.25
FDPS-204	ENST00000461507	FMO5	P49326	533 aa		13.5	□□□□□ -0.25
FDPS-204	ENST00000461507	NRL	P54845	237 aa		13.5	□□□□□ -0.25
FDPS-204	ENST00000461507	SATB1	Q01826	763 aa		13.5	□□□□□ -0.25
FDPS-204	ENST00000461507	TNK2	Q07912	1038 aa		13.5	□□□□□ -0.25
FDPS-204	ENST00000461507	IFRD2	Q12894	506 aa	Predicted RBP	13.5	□□□□□ -0.25
FDPS-204	ENST00000461507	TXNDC8	Q6A555	127 aa		13.5	□□□□□ -0.25
FDPS-204	ENST00000461507	ACOT1	Q86TX2	421 aa		13.5	□□□□□ -0.25
FDPS-204	ENST00000461507	GPIHBP1	Q8IV16	184 aa		13.5	□□□□□ -0.25
FDPS-204	ENST00000461507	MAB21L3	Q8N8X9	362 aa		13.5	□□□□□ -0.25
FDPS-204	ENST00000461507	B3GALNT2	Q8NCR0	500 aa		13.5	□□□□□ -0.25
FDPS-204	ENST00000461507	SEMA4D	Q92854	862 aa		13.5	□□□□□ -0.25
FDPS-204	ENST00000461507	SLC35C1	Q96A29	364 aa		13.5	□□□□□ -0.25
FDPS-204	ENST00000461507	TNIP3	Q96KP6	325 aa		13.5	□□□□□ -0.25
FDPS-204	ENST00000461507	SPATA17	Q96L03	361 aa		13.5	□□□□□ -0.25
FDPS-204	ENST00000461507	DNAI2	Q9GZS0	605 aa		13.5	□□□□□ -0.25
FDPS-204	ENST00000461507	VRTN	Q9H8Y1	702 aa		13.5	□□□□□ -0.25
FDPS-204	ENST00000461507	APOBEC3G	Q9HC16	384 aa	Known RBP	13.5	□□□□□ -0.25
FDPS-204	ENST00000461507	TDP1	Q9NUW8	608 aa		13.5	□□□□□ -0.25
FDPS-204	ENST00000461507	NME7	Q9Y5B8	376 aa		13.5	□□□□□ -0.25
FDPS-204	ENST00000461507		K7ESF4	209 aa		13.49	□□□□□ -0.25
FDPS-204	ENST00000461507	AFP	P02771	609 aa	Known RBP	13.49	□□□□□ -0.25
FDPS-204	ENST00000461507	CXCL12	P48061	93 aa		13.49	□□□□□ -0.25
FDPS-204	ENST00000461507	NDST1	P52848	882 aa		13.49	□□□□□ -0.25
FDPS-204	ENST00000461507	ZNF77	Q15935	545 aa		13.49	□□□□□ -0.25
FDPS-204	ENST00000461507	STX1A	Q16623	288 aa		13.49	□□□□□ -0.25
FDPS-204	ENST00000461507	ZNF394	Q53GI3	561 aa		13.49	□□□□□ -0.25
FDPS-204	ENST00000461507	TMEM196	Q5HYL7	178 aa		13.49	□□□□□ -0.25
FDPS-204	ENST00000461507		Q6ZS52	159 aa		13.49	□□□□□ -0.25
FDPS-204	ENST00000461507	FAM114A1	Q8IWE2	563 aa		13.49	□□□□□ -0.25
FDPS-204	ENST00000461507	DCLK2	Q8N568	766 aa		13.49	□□□□□ -0.25
FDPS-204	ENST00000461507	MYCBPAP	Q8TBZ2	947 aa		13.49	□□□□□ -0.25
FDPS-204	ENST00000461507	PCED1B	Q96HM7	432 aa		13.49	□□□□□ -0.25
FDPS-204	ENST00000461507	TTLL2	Q9BWV7	592 aa		13.49	□□□□□ -0.25
FDPS-204	ENST00000461507	GKN1	Q9NS71	199 aa		13.49	□□□□□ -0.25
FDPS-204	ENST00000461507	RBM12	Q9NTZ6	932 aa	Known RBP	13.49	□□□□□ -0.25
FDPS-204	ENST00000461507	FAM49B	Q9NUQ9	324 aa		13.49	□□□□□ -0.25
FDPS-204	ENST00000461507	GCNT4	Q9P109	453 aa		13.49	□□□□□ -0.25
FDPS-204	ENST00000461507	HMGXB4	Q9UGU5	601 aa		13.49	□□□□□ -0.25
FDPS-204	ENST00000461507	SPAG17	Q6Q759	2223 aa		13.49	□□□□□ -0.25
FDPS-204	ENST00000461507	DMXL1	Q9Y485	3027 aa		13.49	□□□□□ -0.25
FDPS-204	ENST00000461507	OTOL1	A6NHN0	477 aa	Predicted RBP	13.48	□□□□□ -0.25
FDPS-204	ENST00000461507	CLDN5	O00501	218 aa		13.48	□□□□□ -0.25
FDPS-204	ENST00000461507	TRDMT1	O14717	391 aa	Known RBP	13.48	□□□□□ -0.25
FDPS-204	ENST00000461507	CCDC130	P13994	396 aa		13.48	□□□□□ -0.25
FDPS-204	ENST00000461507	PRKCSH	P14314	528 aa	Predicted RBP	13.48	□□□□□ -0.25
FDPS-204	ENST00000461507	PFKL	P17858	780 aa		13.48	□□□□□ -0.25
FDPS-204	ENST00000461507	ADORA2B	P29275	332 aa		13.48	□□□□□ -0.25
FDPS-204	ENST00000461507	KCNH2	Q12809	1159 aa		13.48	□□□□□ -0.25
FDPS-204	ENST00000461507	RUNX3	Q13761	415 aa		13.48	□□□□□ -0.25
FDPS-204	ENST00000461507	PON2	Q15165	354 aa		13.48	□□□□□ -0.25
FDPS-204	ENST00000461507	PDGFRL	Q15198	375 aa		13.48	□□□□□ -0.25
FDPS-204	ENST00000461507	FOXR2	Q6PJQ5	311 aa		13.48	□□□□□ -0.25
FDPS-204	ENST00000461507	KIAA2013	Q8IYS2	634 aa		13.48	□□□□□ -0.25
FDPS-204	ENST00000461507	GPR161	Q8N6U8	529 aa	Known RBP	13.48	□□□□□ -0.25

Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms