RNA–Protein interactions for RNA: ENST00000414419.6

RFFL-204, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 559 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-204ENST00000414419 TTC8Q8TAM2 541 aa11.88□□□□□ -0.51
RFFL-204ENST00000414419 SLC35C1Q96A29 364 aa11.88□□□□□ -0.51
RFFL-204ENST00000414419 HEXIM2Q96MH2 286 aaKnown RBP11.88□□□□□ -0.51
RFFL-204ENST00000414419 FBXO44Q9H4M3 255 aa11.88□□□□□ -0.51
RFFL-204ENST00000414419 FAM86C1Q9NVL1 165 aa11.88□□□□□ -0.51
RFFL-204ENST00000414419 SPATA6Q9NWH7 488 aaPredicted RBP11.88□□□□□ -0.51
RFFL-204ENST00000414419 COMMD8Q9NX08 183 aa11.88□□□□□ -0.51
RFFL-204ENST00000414419 GTSE1Q9NYZ3 720 aa11.88□□□□□ -0.51
RFFL-204ENST00000414419 DLGAP2Q9P1A6 1054 aa11.88□□□□□ -0.51
RFFL-204ENST00000414419 COL4A2P08572 1712 aa11.88□□□□□ -0.51
RFFL-204ENST00000414419 ATG2BQ96BY7 2078 aa11.87□□□□□ -0.51
RFFL-204ENST00000414419 ZNF840PA6NDX5 716 aa11.87□□□□□ -0.51
RFFL-204ENST00000414419 SPECC1L-ADORA2AF8WAN1 911 aa11.87□□□□□ -0.51
RFFL-204ENST00000414419 LAMTOR5O43504 91 aa11.87□□□□□ -0.51
RFFL-204ENST00000414419 CCDC192P0DO97 292 aa11.87□□□□□ -0.51
RFFL-204ENST00000414419 BMP6P22004 513 aa11.87□□□□□ -0.51
RFFL-204ENST00000414419 RPS9P46781 194 aaKnown RBP11.87□□□□□ -0.51
RFFL-204ENST00000414419 FMO5P49326 533 aa11.87□□□□□ -0.51
RFFL-204ENST00000414419 SLC5A3P53794 718 aa11.87□□□□□ -0.51
RFFL-204ENST00000414419 TNK2Q07912 1038 aa11.87□□□□□ -0.51
RFFL-204ENST00000414419 RUNX3Q13761 415 aa11.87□□□□□ -0.51
RFFL-204ENST00000414419 MTF1Q14872 753 aa11.87□□□□□ -0.51
RFFL-204ENST00000414419 CBWD6Q4V339 395 aa11.87□□□□□ -0.51
RFFL-204ENST00000414419 CBWD3Q5JTY5 395 aa11.87□□□□□ -0.51
RFFL-204ENST00000414419 CBWD5Q5RIA9 395 aa11.87□□□□□ -0.51
RFFL-204ENST00000414419 TTI2Q6NXR4 508 aa11.87□□□□□ -0.51
RFFL-204ENST00000414419 ALYREFQ86V81 257 aaKnown RBP11.87□□□□□ -0.51
RFFL-204ENST00000414419 RALGPS2Q86X27 583 aaPredicted RBP11.87□□□□□ -0.51
RFFL-204ENST00000414419 CREBRFQ8IUR6 639 aa11.87□□□□□ -0.51
RFFL-204ENST00000414419 OVCA2Q8WZ82 227 aa11.87□□□□□ -0.51
RFFL-204ENST00000414419 TATDN2Q93075 761 aa11.87□□□□□ -0.51
RFFL-204ENST00000414419 EXOC4Q96A65 974 aa11.87□□□□□ -0.51
RFFL-204ENST00000414419 TWNKQ96RR1 684 aa11.87□□□□□ -0.51
RFFL-204ENST00000414419 SLC22A12Q96S37 553 aa11.87□□□□□ -0.51
RFFL-204ENST00000414419 HNRNPABQ99729 332 aaKnown RBP11.87□□□□□ -0.51
RFFL-204ENST00000414419 DUSP9Q99956 384 aaKnown RBP11.87□□□□□ -0.51
RFFL-204ENST00000414419 SRRTQ9BXP5 876 aaKnown RBP11.87□□□□□ -0.51
RFFL-204ENST00000414419 EBF3Q9H4W6 596 aa11.87□□□□□ -0.51
RFFL-204ENST00000414419 FAM124BQ9H5Z6 455 aaPredicted RBP11.87□□□□□ -0.51
RFFL-204ENST00000414419 CISHQ9NSE2 258 aa11.87□□□□□ -0.51
RFFL-204ENST00000414419 TMEM30AQ9NV96 361 aa11.87□□□□□ -0.51
RFFL-204ENST00000414419 GCNT4Q9P109 453 aa11.87□□□□□ -0.51
RFFL-204ENST00000414419 CHORDC1Q9UHD1 332 aaPredicted RBP11.87□□□□□ -0.51
RFFL-204ENST00000414419 COQ4Q9Y3A0 265 aa11.87□□□□□ -0.51
RFFL-204ENST00000414419 PATJQ8NI35 1801 aa11.86□□□□□ -0.51
RFFL-204ENST00000414419 MBL2P11226 248 aaPredicted RBP11.86□□□□□ -0.51
RFFL-204ENST00000414419 TBXAS1P24557 533 aaPredicted RBP11.86□□□□□ -0.51
RFFL-204ENST00000414419 CTHP32929 405 aa11.86□□□□□ -0.51
RFFL-204ENST00000414419 SOX9P48436 509 aa11.86□□□□□ -0.51
RFFL-204ENST00000414419 IFNAR2P48551 515 aa11.86□□□□□ -0.51
RFFL-204ENST00000414419 SLC8A3P57103 927 aa11.86□□□□□ -0.51
RFFL-204ENST00000414419 LRMPQ12912 555 aa11.86□□□□□ -0.51
RFFL-204ENST00000414419 LRRC32Q14392 662 aa11.86□□□□□ -0.51
RFFL-204ENST00000414419 PDGFRLQ15198 375 aa11.86□□□□□ -0.51
RFFL-204ENST00000414419 SCAMP5Q8TAC9 235 aa11.86□□□□□ -0.51
RFFL-204ENST00000414419 SH3RF2Q8TEC5 729 aa11.86□□□□□ -0.51
RFFL-204ENST00000414419 WHAMMQ8TF30 809 aa11.86□□□□□ -0.51
RFFL-204ENST00000414419 JAKMIP2Q96AA8 810 aa11.86□□□□□ -0.51
RFFL-204ENST00000414419 CLDN23Q96B33 292 aa11.86□□□□□ -0.51
RFFL-204ENST00000414419 TMEM176AQ96HP8 235 aa11.86□□□□□ -0.51
RFFL-204ENST00000414419 GBP4Q96PP9 640 aa11.86□□□□□ -0.51
RFFL-204ENST00000414419 SMOQ99835 787 aa11.86□□□□□ -0.51
RFFL-204ENST00000414419 FAM83CQ9BQN1 747 aa11.86□□□□□ -0.51
RFFL-204ENST00000414419 NACA2Q9H009 215 aa11.86□□□□□ -0.51
RFFL-204ENST00000414419 LMAN1LQ9HAT1 526 aa11.86□□□□□ -0.51
RFFL-204ENST00000414419 CSNK1G1Q9HCP0 422 aa11.86□□□□□ -0.51
RFFL-204ENST00000414419 DUS2Q9NX74 493 aaKnown RBP11.86□□□□□ -0.51
RFFL-204ENST00000414419 ARHGAP26Q9UNA1 814 aa11.86□□□□□ -0.51
RFFL-204ENST00000414419 UTP18Q9Y5J1 556 aaKnown RBP eCLIP11.86□□□□□ -0.51
RFFL-204ENST00000414419 GOLGA6L22H0YM25 854 aa11.85□□□□□ -0.51
RFFL-204ENST00000414419 TNFRSF10BO14763 440 aa11.85□□□□□ -0.51
RFFL-204ENST00000414419 P4HA2O15460 535 aa11.85□□□□□ -0.51
RFFL-204ENST00000414419 BEST1O76090 585 aa11.85□□□□□ -0.51
RFFL-204ENST00000414419 MRE11P49959 708 aa11.85□□□□□ -0.51
RFFL-204ENST00000414419 SLC7A9P82251 487 aa11.85□□□□□ -0.51
RFFL-204ENST00000414419 NR1H3Q13133 447 aa11.85□□□□□ -0.51
RFFL-204ENST00000414419 CUL2Q13617 745 aa11.85□□□□□ -0.51
RFFL-204ENST00000414419 PPP2R5DQ14738 602 aa11.85□□□□□ -0.51
RFFL-204ENST00000414419 PON2Q15165 354 aa11.85□□□□□ -0.51
RFFL-204ENST00000414419 ZNF77Q15935 545 aa11.85□□□□□ -0.51
RFFL-204ENST00000414419 TPD52L1Q16890 204 aaPredicted RBP11.85□□□□□ -0.51
RFFL-204ENST00000414419 HECTD3Q5T447 861 aa11.85□□□□□ -0.51
RFFL-204ENST00000414419 TRIM68Q6AZZ1 485 aa11.85□□□□□ -0.51
RFFL-204ENST00000414419 CLEC20AQ6ZU45 233 aa11.85□□□□□ -0.51
RFFL-204ENST00000414419 DDX42Q86XP3 938 aaKnown RBP eCLIP11.85□□□□□ -0.51
RFFL-204ENST00000414419 CPA6Q8N4T0 437 aa11.85□□□□□ -0.51
RFFL-204ENST00000414419 MLKLQ8NB16 471 aa11.85□□□□□ -0.51
RFFL-204ENST00000414419 ZMIZ2Q8NF64 920 aa11.85□□□□□ -0.51
RFFL-204ENST00000414419 OSCP1Q8WVF1 389 aa11.85□□□□□ -0.51
RFFL-204ENST00000414419 ATP2A3Q93084 1043 aa11.85□□□□□ -0.51
RFFL-204ENST00000414419 NT5C1BQ96P26 610 aa11.85□□□□□ -0.51
RFFL-204ENST00000414419 PHOX2BQ99453 314 aa11.85□□□□□ -0.51
RFFL-204ENST00000414419 ARID3AQ99856 593 aa11.85□□□□□ -0.51
RFFL-204ENST00000414419 DUSP16Q9BY84 665 aa11.85□□□□□ -0.51
RFFL-204ENST00000414419 RNF38Q9H0F5 515 aa11.85□□□□□ -0.51
RFFL-204ENST00000414419 NUP62CLQ9H1M0 184 aa11.85□□□□□ -0.51
RFFL-204ENST00000414419 CLSTN2Q9H4D0 955 aa11.85□□□□□ -0.51
RFFL-204ENST00000414419 TLR8Q9NR97 1041 aaKnown RBP11.85□□□□□ -0.51
RFFL-204ENST00000414419 RWDD2AQ9UIY3 292 aa11.85□□□□□ -0.51
RFFL-204ENST00000414419 MYOFQ9NZM1 2061 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 141.9 ms