RNA–Protein interactions for RNA: ENST00000409472.5

SCAMP4-202, Transcript of secretory carrier membrane protein 4, humanhuman

TSL 2 BASIC

Gene SCAMP4, Length 2,394 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-202ENST00000409472 DCAF4L1Q3SXM0 396 aa15.91■□□□□ 0.14
SCAMP4-202ENST00000409472 CST9Q5W186 159 aa15.91■□□□□ 0.14
SCAMP4-202ENST00000409472 BBS12Q6ZW61 710 aa15.91■□□□□ 0.14
SCAMP4-202ENST00000409472 UNC45BQ8IWX7 931 aa15.91■□□□□ 0.14
SCAMP4-202ENST00000409472 CLEC4CQ8WTT0 213 aa15.91■□□□□ 0.14
SCAMP4-202ENST00000409472 ZNF317Q96PQ6 595 aaPredicted RBP15.91■□□□□ 0.14
SCAMP4-202ENST00000409472 ADAM33Q9BZ11 813 aa15.91■□□□□ 0.14
SCAMP4-202ENST00000409472 SLC24A3Q9HC58 644 aa15.91■□□□□ 0.14
SCAMP4-202ENST00000409472 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.91■□□□□ 0.14
SCAMP4-202ENST00000409472 WDR35Q9P2L0 1181 aa15.91■□□□□ 0.14
SCAMP4-202ENST00000409472 TCRBV7S3A2A0A539 114 aa15.9■□□□□ 0.14
SCAMP4-202ENST00000409472 STAU1O95793 577 aaKnown RBP15.9■□□□□ 0.14
SCAMP4-202ENST00000409472 ZNF865P0CJ78 1059 aaPredicted RBP15.9■□□□□ 0.14
SCAMP4-202ENST00000409472 FGFR1P11362 822 aa15.9■□□□□ 0.14
SCAMP4-202ENST00000409472 DARSP14868 501 aaKnown RBP15.9■□□□□ 0.14
SCAMP4-202ENST00000409472 EZRP15311 586 aaKnown RBP15.9■□□□□ 0.14
SCAMP4-202ENST00000409472 IGFBP6P24592 240 aaPredicted RBP15.9■□□□□ 0.14
SCAMP4-202ENST00000409472 GCAP28676 217 aa15.9■□□□□ 0.14
SCAMP4-202ENST00000409472 ZNF143P52747 638 aaPredicted RBP15.9■□□□□ 0.14
SCAMP4-202ENST00000409472 ZBTB6Q15916 424 aa15.9■□□□□ 0.14
SCAMP4-202ENST00000409472 MORN1Q5T089 497 aa15.9■□□□□ 0.14
SCAMP4-202ENST00000409472 RFX6Q8HWS3 928 aa15.9■□□□□ 0.14
SCAMP4-202ENST00000409472 KCTD6Q8NC69 237 aa15.9■□□□□ 0.14
SCAMP4-202ENST00000409472 PRCCQ92733 491 aaPredicted RBP15.9■□□□□ 0.14
SCAMP4-202ENST00000409472 WDR83Q9BRX9 315 aaKnown RBP15.9■□□□□ 0.14
SCAMP4-202ENST00000409472 GCOM2Q9BZD3 368 aaPredicted RBP15.9■□□□□ 0.14
SCAMP4-202ENST00000409472 PIN4Q9Y237 131 aaKnown RBP15.9■□□□□ 0.14
SCAMP4-202ENST00000409472 MBLAC1A4D2B0 266 aaPredicted RBP15.9■□□□□ 0.14
SCAMP4-202ENST00000409472 SLC15A5A6NIM6 579 aa15.9■□□□□ 0.14
SCAMP4-202ENST00000409472 MAP3K6O95382 1288 aa15.9■□□□□ 0.14
SCAMP4-202ENST00000409472 CCDC130P13994 396 aa15.9■□□□□ 0.14
SCAMP4-202ENST00000409472 PDGFRAP16234 1089 aa15.9■□□□□ 0.14
SCAMP4-202ENST00000409472 GPD1P21695 349 aa15.9■□□□□ 0.14
SCAMP4-202ENST00000409472 SOX4Q06945 474 aaPredicted RBP15.9■□□□□ 0.14
SCAMP4-202ENST00000409472 MFSD10Q14728 455 aa15.9■□□□□ 0.14
SCAMP4-202ENST00000409472 KYAT1Q16773 422 aa15.9■□□□□ 0.14
SCAMP4-202ENST00000409472 HADHQ16836 314 aaKnown RBP15.9■□□□□ 0.14
SCAMP4-202ENST00000409472 SOWAHAQ2M3V2 549 aa15.9■□□□□ 0.14
SCAMP4-202ENST00000409472 MSS51Q4VC12 460 aa15.9■□□□□ 0.14
SCAMP4-202ENST00000409472 PKDCCQ504Y2 493 aa15.9■□□□□ 0.14
SCAMP4-202ENST00000409472 SYCP2LQ5T4T6 812 aa15.9■□□□□ 0.14
SCAMP4-202ENST00000409472 OLFML1Q6UWY5 402 aa15.9■□□□□ 0.14
SCAMP4-202ENST00000409472 SESTD1Q86VW0 696 aa15.9■□□□□ 0.14
SCAMP4-202ENST00000409472 SCUBE3Q8IX30 993 aa15.9■□□□□ 0.14
SCAMP4-202ENST00000409472 CCDC13Q8IYE1 715 aa15.9■□□□□ 0.14
SCAMP4-202ENST00000409472 CMASQ8NFW8 434 aaPredicted RBP15.9■□□□□ 0.14
SCAMP4-202ENST00000409472 ROPN1BQ9BZX4 212 aaPredicted RBP15.9■□□□□ 0.14
SCAMP4-202ENST00000409472 ROPN1Q9HAT0 212 aaPredicted RBP15.9■□□□□ 0.14
SCAMP4-202ENST00000409472 PCDH9Q9HC56 1237 aa15.9■□□□□ 0.14
SCAMP4-202ENST00000409472 CACNG4Q9UBN1 327 aa15.9■□□□□ 0.14
SCAMP4-202ENST00000409472 TPX2Q9ULW0 747 aaKnown RBP15.9■□□□□ 0.14
SCAMP4-202ENST00000409472 DRG1Q9Y295 367 aaKnown RBP15.9■□□□□ 0.14
SCAMP4-202ENST00000409472 TMEM120BA0PK00 339 aa15.89■□□□□ 0.13
SCAMP4-202ENST00000409472 SRRM3A6NNA2 597 aaPredicted RBP15.89■□□□□ 0.13
SCAMP4-202ENST00000409472 CLNS1AP54105 237 aaKnown RBP15.89■□□□□ 0.13
SCAMP4-202ENST00000409472 IFT88Q13099 833 aa15.89■□□□□ 0.13
SCAMP4-202ENST00000409472 ZC3H12AQ5D1E8 599 aaKnown RBP15.89■□□□□ 0.13
SCAMP4-202ENST00000409472 ANKMY2Q8IV38 441 aa15.89■□□□□ 0.13
SCAMP4-202ENST00000409472 C2orf69Q8N8R5 385 aa15.89■□□□□ 0.13
SCAMP4-202ENST00000409472 KHSRPQ92945 711 aaKnown RBP eCLIP15.89■□□□□ 0.13
SCAMP4-202ENST00000409472 SERPINB12Q96P63 405 aa15.89■□□□□ 0.13
SCAMP4-202ENST00000409472 MAGEB5Q9BZ81 275 aa15.89■□□□□ 0.13
SCAMP4-202ENST00000409472 RRAGCQ9HB90 399 aa15.89■□□□□ 0.13
SCAMP4-202ENST00000409472 INTS9Q9NV88 658 aaKnown RBP15.89■□□□□ 0.13
SCAMP4-202ENST00000409472 EURLQ9NYK6 297 aa15.89■□□□□ 0.13
SCAMP4-202ENST00000409472 C5orf60A6NFR6 353 aa15.89■□□□□ 0.13
SCAMP4-202ENST00000409472 UNCXA6NJT0 531 aa15.89■□□□□ 0.13
SCAMP4-202ENST00000409472 PAPSS1O43252 624 aaPredicted RBP15.89■□□□□ 0.13
SCAMP4-202ENST00000409472 PDGFRBP09619 1106 aa15.89■□□□□ 0.13
SCAMP4-202ENST00000409472 LMO2P25791 158 aa15.89■□□□□ 0.13
SCAMP4-202ENST00000409472 ATXN1P54253 815 aaKnown RBP15.89■□□□□ 0.13
SCAMP4-202ENST00000409472 ADAM17P78536 824 aa15.89■□□□□ 0.13
SCAMP4-202ENST00000409472 LMNB2Q03252 620 aa15.89■□□□□ 0.13
SCAMP4-202ENST00000409472 SNX17Q15036 470 aa15.89■□□□□ 0.13
SCAMP4-202ENST00000409472 CA9Q16790 459 aa15.89■□□□□ 0.13
SCAMP4-202ENST00000409472 CCDC14Q49A88 953 aa15.89■□□□□ 0.13
SCAMP4-202ENST00000409472 C9orf57Q5W0N0 161 aa15.89■□□□□ 0.13
SCAMP4-202ENST00000409472 AP1ARQ63HQ0 302 aa15.89■□□□□ 0.13
SCAMP4-202ENST00000409472 NOTUMQ6P988 496 aa15.89■□□□□ 0.13
SCAMP4-202ENST00000409472 ALKAL1Q6UXT8 129 aa15.89■□□□□ 0.13
SCAMP4-202ENST00000409472 LRRC34Q8IZ02 419 aa15.89■□□□□ 0.13
SCAMP4-202ENST00000409472 ZBED8Q8IZ13 594 aa15.89■□□□□ 0.13
SCAMP4-202ENST00000409472 FAM71DQ8N9W8 422 aa15.89■□□□□ 0.13
SCAMP4-202ENST00000409472 ARRDC4Q8NCT1 418 aa15.89■□□□□ 0.13
SCAMP4-202ENST00000409472 BBOF1Q8ND07 529 aa15.89■□□□□ 0.13
SCAMP4-202ENST00000409472 KBTBD7Q8WVZ9 684 aa15.89■□□□□ 0.13
SCAMP4-202ENST00000409472 CPT1BQ92523 772 aa15.89■□□□□ 0.13
SCAMP4-202ENST00000409472 CHMP6Q96FZ7 201 aa15.89■□□□□ 0.13
SCAMP4-202ENST00000409472 MIS12Q9H081 205 aa15.89■□□□□ 0.13
SCAMP4-202ENST00000409472 FARP1Q9Y4F1 1045 aaPredicted RBP15.89■□□□□ 0.13
SCAMP4-202ENST00000409472 NRCAMQ92823 1304 aa15.89■□□□□ 0.13
SCAMP4-202ENST00000409472 RRN3P2A6NIE6 340 aa15.88■□□□□ 0.13
SCAMP4-202ENST00000409472 RNF8O76064 485 aa15.88■□□□□ 0.13
SCAMP4-202ENST00000409472 TMEM63AO94886 807 aa15.88■□□□□ 0.13
SCAMP4-202ENST00000409472 CYP2B6P20813 491 aa15.88■□□□□ 0.13
SCAMP4-202ENST00000409472 RPL22P35268 128 aaKnown RBP15.88■□□□□ 0.13
SCAMP4-202ENST00000409472 CTCFP49711 727 aaPredicted RBP15.88■□□□□ 0.13
SCAMP4-202ENST00000409472 CDH6P55285 790 aa15.88■□□□□ 0.13
SCAMP4-202ENST00000409472 MAP2K5Q13163 448 aa15.88■□□□□ 0.13
SCAMP4-202ENST00000409472 ZC3H18Q86VM9 953 aaKnown RBP15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms