RNA–Protein interactions for RNA: snR48

snR48, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR48, Length 113 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR48snR48 MOG1P47123 218 aa-2.78□□□□□ -2.85
snR48snR48 YGL204CP53089 101 aa-2.78□□□□□ -2.85
snR48snR48 BUD4P47136 1447 aa-2.78□□□□□ -2.85
snR48snR48 YOR1P53049 1477 aa-2.78□□□□□ -2.86
snR48snR48 ECM12O13529 151 aa-2.79□□□□□ -2.86
snR48snR48 PAU2P32612 120 aa-2.79□□□□□ -2.86
snR48snR48 YOR376W-AQ3E805 51 aa-2.79□□□□□ -2.86
snR48snR48 MIX14Q04341 121 aa-2.8□□□□□ -2.86
snR48snR48 YMR001C-AQ8TGS9 76 aa-2.8□□□□□ -2.86
snR48snR48 YRF1-1P0CX20 1796 aa-2.8□□□□□ -2.86
snR48snR48 YRF1-5P0CX21 1796 aa-2.8□□□□□ -2.86
snR48snR48 YRF1-8P0CX22 1796 aa-2.8□□□□□ -2.86
snR48snR48 YLR361C-AQ3E795 98 aa-2.81□□□□□ -2.86
snR48snR48 YNL277W-AQ3E7Z0 62 aa-2.81□□□□□ -2.86
snR48snR48 TOR2P32600 2474 aaKnown RBP-2.81□□□□□ -2.86
snR48snR48 YCR099CP25657 155 aa-2.82□□□□□ -2.86
snR48snR48 YBL044WP38194 122 aa-2.82□□□□□ -2.86
snR48snR48 YHR138CP38841 114 aaPredicted RBP-2.82□□□□□ -2.86
snR48snR48 DAD1Q12248 94 aa-2.83□□□□□ -2.86
snR48snR48 COX7P10174 60 aa-2.84□□□□□ -2.86
snR48snR48 POP7P38291 140 aa-2.84□□□□□ -2.86
snR48snR48 Q0144Q9ZZW2 109 aa-2.84□□□□□ -2.86
snR48snR48 BPH1P25356 2167 aa-2.84□□□□□ -2.86
snR48snR48 SRB8P25648 1427 aa-2.85□□□□□ -2.86
snR48snR48 PAU19P0CE85 124 aa-2.85□□□□□ -2.87
snR48snR48 PAU3P25610 124 aa-2.85□□□□□ -2.87
snR48snR48 RBL2P48606 106 aaKnown RBP-2.86□□□□□ -2.87
snR48snR48 CMC2Q3E7A4 109 aa-2.86□□□□□ -2.87
snR48snR48 MRP17P28778 131 aa-2.87□□□□□ -2.87
snR48snR48 CSN9Q03981 162 aa-2.87□□□□□ -2.87
snR48snR48 PAU20Q08322 120 aa-2.87□□□□□ -2.87
snR48snR48 MIC10Q96VH5 97 aa-2.87□□□□□ -2.87
snR48snR48 MMS1Q06211 1407 aa-2.87□□□□□ -2.87
snR48snR48 GTT1P40582 234 aa-2.88□□□□□ -2.87
snR48snR48 ATG38Q05789 226 aaKnown RBP-2.88□□□□□ -2.87
snR48snR48 YIR021W-AQ3E739 70 aa-2.88□□□□□ -2.87
snR48snR48 TEL1P38110 2787 aa-2.88□□□□□ -2.87
snR48snR48 YLR419WQ06698 1435 aaKnown RBP-2.88□□□□□ -2.87
snR48snR48 TDA2P40045 126 aa-2.89□□□□□ -2.87
snR48snR48 PAU15P40585 124 aa-2.89□□□□□ -2.87
snR48snR48 SFT1P43682 97 aa-2.89□□□□□ -2.87
snR48snR48 GRX3Q03835 250 aa-2.89□□□□□ -2.87
snR48snR48 YNR034W-AQ3E841 98 aa-2.91□□□□□ -2.88
snR48snR48 NTE1Q04958 1679 aa-2.93□□□□□ -2.88
snR48snR48 RGI1P40043 161 aaPredicted RBP-2.94□□□□□ -2.88
snR48snR48 SAE3P89114 91 aa-2.94□□□□□ -2.88
snR48snR48 SPC24Q04477 213 aa-2.94□□□□□ -2.88
snR48snR48 PAU16P35994 123 aa-2.95□□□□□ -2.88
snR48snR48 YHR050W-AQ05451 56 aa-2.95□□□□□ -2.88
snR48snR48 Q0032Q9ZZX7 96 aa-2.95□□□□□ -2.88
snR48snR48 MDN1Q12019 4910 aaKnown RBP-2.96□□□□□ -2.88
snR48snR48 ROX3P25046 220 aa-2.96□□□□□ -2.88
snR48snR48 YLR042CQ07990 161 aa-2.97□□□□□ -2.88
snR48snR48 PAU6P0CE90 120 aa-2.98□□□□□ -2.89
snR48snR48 PAU18P0CE91 120 aa-2.98□□□□□ -2.89
snR48snR48 AIM19P40502 157 aa-2.98□□□□□ -2.89
snR48snR48 SNA2P56508 79 aa-2.98□□□□□ -2.89
snR48snR48 YNL042W-BQ3E7Z2 85 aa-2.98□□□□□ -2.89
snR48snR48 GIM4P40005 111 aaKnown RBP-2.99□□□□□ -2.89
snR48snR48 EDC1P53080 175 aaPredicted RBP-2.99□□□□□ -2.89
snR48snR48 DYN1P36022 4092 aa-2.99□□□□□ -2.89
snR48snR48 TY1B-BRQ12193 1756 aa-3□□□□□ -2.89
snR48snR48 RPS20P38701 121 aaKnown RBP-3□□□□□ -2.89
snR48snR48 HUR1P45820 110 aa-3□□□□□ -2.89
snR48snR48 SMD2Q06217 110 aaKnown RBP-3□□□□□ -2.89
snR48snR48 YCR095W-AQ3E787 52 aa-3□□□□□ -2.89
snR48snR48 YLR365WQ7LIF2 110 aa-3□□□□□ -2.89
snR48snR48 SRB6P32570 121 aa-3.01□□□□□ -2.89
snR48snR48 BPT1P14772 1559 aa-3.02□□□□□ -2.89
snR48snR48 DNF3Q12674 1656 aa-3.02□□□□□ -2.89
snR48snR48 APS2Q00381 147 aa-3.03□□□□□ -2.89
snR48snR48 TY1B-DR5P0C2I2 1755 aa-3.03□□□□□ -2.89
snR48snR48 TY1B-DR6P0C2I3 1755 aa-3.03□□□□□ -2.89
snR48snR48 TY1B-LR2P0C2I5 1755 aa-3.03□□□□□ -2.89
snR48snR48 TY1B-PR1P0C2I9 1755 aaKnown RBP-3.03□□□□□ -2.89
snR48snR48 TY1B-PR2P0C2J0 1756 aa-3.03□□□□□ -2.89
snR48snR48 TY1B-JR1P47098 1755 aa-3.03□□□□□ -2.89
snR48snR48 TY1B-JR2P47100 1755 aaKnown RBP-3.03□□□□□ -2.89
snR48snR48 TY1B-ML2Q03434 1755 aaKnown RBP-3.03□□□□□ -2.89
snR48snR48 TY1B-ER1Q03612 1755 aa-3.03□□□□□ -2.89
snR48snR48 TY1B-DR1Q03855 1755 aa-3.03□□□□□ -2.89
snR48snR48 TY1B-MR2Q04670 1755 aaKnown RBP-3.03□□□□□ -2.89
snR48snR48 TY1B-ML1Q04711 1755 aaKnown RBP-3.03□□□□□ -2.89
snR48snR48 TY1B-GR1Q12141 1755 aa-3.03□□□□□ -2.89
snR48snR48 TY1B-GR2Q12269 1755 aa-3.03□□□□□ -2.89
snR48snR48 TY1B-OLQ12273 1755 aa-3.03□□□□□ -2.89
snR48snR48 TY1B-PLQ12414 1755 aaKnown RBP-3.03□□□□□ -2.89
snR48snR48 TY1B-ORQ92393 1755 aa-3.03□□□□□ -2.89
snR48snR48 TY1B-DR3Q99231 1755 aa-3.03□□□□□ -2.89
snR48snR48 PAU1P0CE88 120 aa-3.04□□□□□ -2.9
snR48snR48 PAU14P0CE89 120 aa-3.04□□□□□ -2.9
snR48snR48 PAU8P0CE92 120 aa-3.04□□□□□ -2.9
snR48snR48 PAU11P0CE93 120 aa-3.04□□□□□ -2.9
snR48snR48 TOM6P33448 61 aa-3.04□□□□□ -2.9
snR48snR48 PAU13P38725 120 aa-3.04□□□□□ -2.9
snR48snR48 PAU10Q03050 120 aa-3.04□□□□□ -2.9
snR48snR48 YBR201C-AQ2V2Q3 67 aa-3.04□□□□□ -2.9
snR48snR48 PAU9Q3E770 120 aa-3.04□□□□□ -2.9
snR48snR48 YDR278CQ05612 105 aa-3.05□□□□□ -2.9
snR48snR48 MYO2P19524 1574 aaKnown RBP-3.05□□□□□ -2.9
Retrieved 100 of 5,963 RNA–protein pairs in 28.3 ms