RNA–Protein interactions for RNA: YPR101W

SNT309, Transcript of Member of the NineTeen Complex (NTC), yeast

Gene SNT309, Length 528 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNT309	YPR101W	YMR317W	Q04893	1140 aa		5.31	□□□□□ -1.56
SNT309	YPR101W	YOL085C	Q99345	113 aa		5.31	□□□□□ -1.56
SNT309	YPR101W	BPH1	P25356	2167 aa		5.31	□□□□□ -1.56
SNT309	YPR101W	GCN1	P33892	2672 aa	Known RBP	5.3	□□□□□ -1.56
SNT309	YPR101W	ATP15	P21306	62 aa		5.3	□□□□□ -1.56
SNT309	YPR101W	VTC1	P40046	129 aa	RIP-Chip data	5.3	□□□□□ -1.56	not detected
SNT309	YPR101W	OST2	P46964	130 aa		5.3	□□□□□ -1.56
SNT309	YPR101W	VPS55	P47111	140 aa		5.3	□□□□□ -1.56
SNT309	YPR101W	YJR146W	P47174	117 aa		5.3	□□□□□ -1.56
SNT309	YPR101W	YPR013C	Q12145	317 aa		5.3	□□□□□ -1.56
SNT309	YPR101W	PRM7	Q12459	698 aa		5.3	□□□□□ -1.56
SNT309	YPR101W	Q0255	P03881	472 aa		5.29	□□□□□ -1.56
SNT309	YPR101W	RPL16A	P26784	199 aa	Known RBP	5.29	□□□□□ -1.56
SNT309	YPR101W	RPL16B	P26785	198 aa	Known RBP	5.29	□□□□□ -1.56
SNT309	YPR101W	YER085C	P40058	173 aa		5.29	□□□□□ -1.56
SNT309	YPR101W	PEX17	P40155	199 aa		5.29	□□□□□ -1.56
SNT309	YPR101W	HPA2	Q06592	156 aa		5.29	□□□□□ -1.56
SNT309	YPR101W	YOR011W-A	Q3E807	68 aa		5.29	□□□□□ -1.56
SNT309	YPR101W	TRP1	P00912	224 aa		5.28	□□□□□ -1.56
SNT309	YPR101W	SPG4	Q04438	115 aa		5.28	□□□□□ -1.56
SNT309	YPR101W	HOR7	Q05827	59 aa		5.28	□□□□□ -1.56
SNT309	YPR101W	RRG8	Q06109	277 aa		5.28	□□□□□ -1.56
SNT309	YPR101W	YER135C	P40082	130 aa		5.27	□□□□□ -1.57
SNT309	YPR101W	TRA1	P38811	3744 aa		5.26	□□□□□ -1.57
SNT309	YPR101W	RPP2A	P05319	106 aa	Known RBP	5.26	□□□□□ -1.57
SNT309	YPR101W	RPL18A	P0CX49	186 aa	Known RBP	5.26	□□□□□ -1.57
SNT309	YPR101W	RPL18B	P0CX50	186 aa	Known RBP	5.26	□□□□□ -1.57
SNT309	YPR101W	VHS2	P40463	436 aa		5.26	□□□□□ -1.57
SNT309	YPR101W	YLR042C	Q07990	161 aa		5.26	□□□□□ -1.57
SNT309	YPR101W	RPL28	P02406	149 aa	Known RBP	5.25	□□□□□ -1.57
SNT309	YPR101W	UGX2	P32772	223 aa		5.25	□□□□□ -1.57
SNT309	YPR101W	YCH1	P42937	148 aa		5.25	□□□□□ -1.57
SNT309	YPR101W	CAX4	P53223	239 aa		5.25	□□□□□ -1.57
SNT309	YPR101W	MRPS12	P53732	153 aa		5.25	□□□□□ -1.57
SNT309	YPR101W	YNL092W	P53934	400 aa		5.25	□□□□□ -1.57
SNT309	YPR101W	MRPS8	Q03799	155 aa		5.25	□□□□□ -1.57
SNT309	YPR101W	YMR244W	Q04018	355 aa		5.25	□□□□□ -1.57
SNT309	YPR101W	INO4	P13902	151 aa		5.24	□□□□□ -1.57
SNT309	YPR101W	MIG3	P39943	394 aa		5.24	□□□□□ -1.57
SNT309	YPR101W	QCR8	P08525	94 aa		5.23	□□□□□ -1.57
SNT309	YPR101W	RPA12	P32529	125 aa	Known RBP	5.23	□□□□□ -1.57
SNT309	YPR101W	ISD11	Q6Q560	94 aa		5.23	□□□□□ -1.57
SNT309	YPR101W	Q0297	Q9ZZV8	51 aa		5.23	□□□□□ -1.57
SNT309	YPR101W	YBR056W-A	I2HB52	66 aa		5.22	□□□□□ -1.57
SNT309	YPR101W	COX10	P21592	462 aa		5.22	□□□□□ -1.57
SNT309	YPR101W	SHU1	P38751	150 aa		5.22	□□□□□ -1.57
SNT309	YPR101W	RRT13	P40042	185 aa		5.22	□□□□□ -1.57
SNT309	YPR101W	SRL1	Q08673	210 aa		5.22	□□□□□ -1.57
SNT309	YPR101W	YCR085W	P25650	117 aa		5.21	□□□□□ -1.58
SNT309	YPR101W	YEL008W	P40001	126 aa		5.21	□□□□□ -1.58
SNT309	YPR101W	SIM1	P40472	476 aa		5.21	□□□□□ -1.58
SNT309	YPR101W	YFL065C	P43539	102 aa		5.21	□□□□□ -1.58
SNT309	YPR101W	FIP1	P45976	327 aa		5.21	□□□□□ -1.58
SNT309	YPR101W	YPR203W	Q08994	102 aa		5.21	□□□□□ -1.58
SNT309	YPR101W	MID2	P36027	376 aa		5.2	□□□□□ -1.58
SNT309	YPR101W	YBR209W	P38311	105 aa		5.2	□□□□□ -1.58
SNT309	YPR101W	YHR130C	P38834	111 aa		5.2	□□□□□ -1.58
SNT309	YPR101W	YNL190W	P53872	204 aa		5.2	□□□□□ -1.58
SNT309	YPR101W	YCL021W-A	Q96VH3	125 aa		5.2	□□□□□ -1.58
SNT309	YPR101W	NRG2	P38082	220 aa		5.19	□□□□□ -1.58
SNT309	YPR101W	YIA6	P40556	373 aa		5.19	□□□□□ -1.58
SNT309	YPR101W	YFR035C	P43608	114 aa		5.19	□□□□□ -1.58
SNT309	YPR101W	EOS1	P53938	366 aa		5.19	□□□□□ -1.58
SNT309	YPR101W	RPL2A	P0CX45	254 aa	Known RBP	5.18	□□□□□ -1.58
SNT309	YPR101W	RPL2B	P0CX46	254 aa	Known RBP	5.18	□□□□□ -1.58
SNT309	YPR101W	UBC5	P15732	148 aa		5.18	□□□□□ -1.58
SNT309	YPR101W	YAR029W	P39549	74 aa		5.18	□□□□□ -1.58
SNT309	YPR101W	ALG13	P53178	202 aa		5.18	□□□□□ -1.58
SNT309	YPR101W	PMP3	P87284	55 aa		5.18	□□□□□ -1.58
SNT309	YPR101W	YCR075W-A	Q3E830	75 aa		5.18	□□□□□ -1.58
SNT309	YPR101W	TAR1	Q8TGM6	124 aa		5.18	□□□□□ -1.58
SNT309	YPR101W	RPS11A	P0CX47	156 aa	Known RBP	5.17	□□□□□ -1.58
SNT309	YPR101W	RPS11B	P0CX48	156 aa	Known RBP	5.17	□□□□□ -1.58
SNT309	YPR101W	KRE1	P17260	313 aa		5.17	□□□□□ -1.58
SNT309	YPR101W	YGL088W	P53151	121 aa		5.17	□□□□□ -1.58
SNT309	YPR101W	ABF2	Q02486	183 aa		5.17	□□□□□ -1.58
SNT309	YPR101W	PPT2	Q12036	173 aa		5.17	□□□□□ -1.58
SNT309	YPR101W	YER145C-A	A0A023PYF4	145 aa		5.16	□□□□□ -1.58
SNT309	YPR101W	RPL15A	P05748	204 aa	Known RBP	5.16	□□□□□ -1.58
SNT309	YPR101W	DSE2	P38844	325 aa		5.16	□□□□□ -1.58
SNT309	YPR101W	YIL059C	P40520	121 aa		5.16	□□□□□ -1.58
SNT309	YPR101W	YNL184C	P53876	108 aa		5.16	□□□□□ -1.58
SNT309	YPR101W	YAL063C-A	Q3E791	96 aa		5.16	□□□□□ -1.58
SNT309	YPR101W	URA2	P07259	2214 aa	Known RBP	5.16	□□□□□ -1.58
SNT309	YPR101W	YCR041W	P37265	110 aa		5.15	□□□□□ -1.59
SNT309	YPR101W	SKI6	P46948	246 aa	Predicted RBP	5.15	□□□□□ -1.59
SNT309	YPR101W	YFL041W-A	Q3E817	63 aa		5.15	□□□□□ -1.59
SNT309	YPR101W	RPB9	P27999	122 aa		5.14	□□□□□ -1.59
SNT309	YPR101W	HUR1	P45820	110 aa		5.14	□□□□□ -1.59
SNT309	YPR101W	YAR1	P46683	200 aa		5.14	□□□□□ -1.59
SNT309	YPR101W	YPS5	P53057	165 aa		5.14	□□□□□ -1.59
SNT309	YPR101W	RGM1	Q00453	211 aa		5.14	□□□□□ -1.59
SNT309	YPR101W	AIM19	P40502	157 aa		5.13	□□□□□ -1.59
SNT309	YPR101W	ARC15	P40518	154 aa	RIP-Chip data	5.13	□□□□□ -1.59	not detected
SNT309	YPR101W	YBR126W-A	Q8TGU7	68 aa		5.13	□□□□□ -1.59
SNT309	YPR101W	MRPL24	P36525	258 aa	Predicted RBP	5.12	□□□□□ -1.59
SNT309	YPR101W	MPC2	P38857	129 aa		5.12	□□□□□ -1.59
SNT309	YPR101W	KRE9	P39005	276 aa		5.12	□□□□□ -1.59
SNT309	YPR101W	COX14	P39103	70 aa		5.12	□□□□□ -1.59
SNT309	YPR101W	RPR2	P40571	144 aa		5.12	□□□□□ -1.59

Retrieved 100 of 5,963 RNA–protein pairs in 89.8 ms