RNA–Protein interactions for RNA: YPR055W

SEC8, Transcript of Essential 121 kDa subunit of the exocyst complex, yeastyeast

Gene SEC8, Length 3,198 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC8YPR055W GTT1P40582 234 aa-0.03□□□□□ -2.41
SEC8YPR055W PHB1P40961 287 aa-0.03□□□□□ -2.41
SEC8YPR055W PAM16P42949 149 aa-0.03□□□□□ -2.41
SEC8YPR055W HUR1P45820 110 aa-0.03□□□□□ -2.41
SEC8YPR055W JAC1P53193 184 aa-0.03□□□□□ -2.41
SEC8YPR055W YML079WQ03629 201 aa-0.03□□□□□ -2.41
SEC8YPR055W YMR175W-AQ3E766 64 aa-0.03□□□□□ -2.41
SEC8YPR055W YOS1Q3E834 85 aa-0.03□□□□□ -2.41
SEC8YPR055W YOR032W-AQ8TGS1 66 aa-0.03□□□□□ -2.41
SEC8YPR055W SPS2P08459 502 aa-0.04□□□□□ -2.42
SEC8YPR055W POR2P40478 281 aa-0.04□□□□□ -2.42
SEC8YPR055W YGR201CP42936 225 aa-0.04□□□□□ -2.42
SEC8YPR055W YNL140CP53910 189 aa-0.04□□□□□ -2.42
SEC8YPR055W YLR296WQ05898 108 aa-0.04□□□□□ -2.42
SEC8YPR055W YOL118CQ08259 102 aa-0.04□□□□□ -2.42
SEC8YPR055W YHR213WP0CI67 198 aa-0.04□□□□□ -2.42
SEC8YPR055W DDR48P18899 430 aaKnown RBP-0.04□□□□□ -2.42
SEC8YPR055W RPS1AP33442 255 aaKnown RBP-0.04□□□□□ -2.42
SEC8YPR055W DER1P38307 211 aa-0.04□□□□□ -2.42
SEC8YPR055W GLC8P41818 229 aa-0.04□□□□□ -2.42
SEC8YPR055W SPC2Q04969 178 aa-0.04□□□□□ -2.42
SEC8YPR055W YKL023C-AQ2V2P3 75 aa-0.04□□□□□ -2.42
SEC8YPR055W RPS22AP0C0W1 130 aaKnown RBP-0.04□□□□□ -2.42
SEC8YPR055W RPS1BP23248 255 aaKnown RBP-0.04□□□□□ -2.42
SEC8YPR055W SPT14P32363 452 aa-0.04□□□□□ -2.42
SEC8YPR055W HPM1P40481 377 aa-0.04□□□□□ -2.42
SEC8YPR055W DIE2P50076 525 aa-0.04□□□□□ -2.42
SEC8YPR055W YMR090WQ04304 227 aaKnown RBP-0.04□□□□□ -2.42
SEC8YPR055W RPS22BQ3E7Y3 130 aaKnown RBP-0.04□□□□□ -2.42
SEC8YPR055W YMR105W-AQ8TGS8 64 aa-0.04□□□□□ -2.42
SEC8YPR055W JIP3O13555 125 aa-0.05□□□□□ -2.42
SEC8YPR055W RPL14AP36105 138 aaKnown RBP-0.05□□□□□ -2.42
SEC8YPR055W RPL14BP38754 138 aaKnown RBP-0.05□□□□□ -2.42
SEC8YPR055W LSM1P47017 172 aaKnown RBP-0.05□□□□□ -2.42
SEC8YPR055W NSL1Q12143 216 aa-0.05□□□□□ -2.42
SEC8YPR055W RTC6O14464 93 aa-0.05□□□□□ -2.42
SEC8YPR055W RPS25BP0C0T4 108 aaKnown RBP-0.05□□□□□ -2.42
SEC8YPR055W UBC4P15731 148 aa-0.05□□□□□ -2.42
SEC8YPR055W SCP1Q08873 200 aa-0.05□□□□□ -2.42
SEC8YPR055W YPL225WQ08971 146 aaKnown RBP-0.05□□□□□ -2.42
SEC8YPR055W YLR050CQ12155 161 aaKnown RBP-0.05□□□□□ -2.42
SEC8YPR055W RPS25AQ3E792 108 aaPredicted RBP-0.05□□□□□ -2.42
SEC8YPR055W YBR072C-AQ3E794 53 aa-0.05□□□□□ -2.42
SEC8YPR055W YLR255CO13574 117 aa-0.06□□□□□ -2.42
SEC8YPR055W HMRA2P0CY13 119 aa-0.06□□□□□ -2.42
SEC8YPR055W UTP11P34247 250 aaPredicted RBP-0.06□□□□□ -2.42
SEC8YPR055W ATX1P38636 73 aa-0.06□□□□□ -2.42
SEC8YPR055W RPS20P38701 121 aaKnown RBP-0.06□□□□□ -2.42
SEC8YPR055W PAC10P48363 199 aa-0.06□□□□□ -2.42
SEC8YPR055W YGR017WP53210 297 aa-0.06□□□□□ -2.42
SEC8YPR055W HSK3P69852 69 aa-0.06□□□□□ -2.42
SEC8YPR055W CSN9Q03981 162 aa-0.06□□□□□ -2.42
SEC8YPR055W HPT1Q04178 221 aaKnown RBP-0.06□□□□□ -2.42
SEC8YPR055W YMR082CQ04276 118 aa-0.06□□□□□ -2.42
SEC8YPR055W YOR011W-AQ3E807 68 aa-0.06□□□□□ -2.42
SEC8YPR055W YDR034W-BQ6Q5X2 51 aa-0.06□□□□□ -2.42
SEC8YPR055W Q0017Q9ZZX8 53 aa-0.06□□□□□ -2.42
SEC8YPR055W YAL065CO13511 128 aa-0.06□□□□□ -2.42
SEC8YPR055W RPS11AP0CX47 156 aaKnown RBP-0.06□□□□□ -2.42
SEC8YPR055W RPS11BP0CX48 156 aaKnown RBP-0.06□□□□□ -2.42
SEC8YPR055W SLM6P38343 150 aa-0.06□□□□□ -2.42
SEC8YPR055W IPI1P38803 334 aaPredicted RBP-0.06□□□□□ -2.42
SEC8YPR055W YIR020CP40575 100 aa-0.06□□□□□ -2.42
SEC8YPR055W LST8P41318 303 aa-0.06□□□□□ -2.42
SEC8YPR055W YNR064CP53750 290 aa-0.06□□□□□ -2.42
SEC8YPR055W YMR321CQ04898 105 aa-0.06□□□□□ -2.42
SEC8YPR055W YLR118CQ12354 227 aa-0.06□□□□□ -2.42
SEC8YPR055W URA2P07259 2214 aaKnown RBP-0.06□□□□□ -2.42
SEC8YPR055W FUN14P18411 198 aa-0.06□□□□□ -2.42
SEC8YPR055W ATP7P30902 174 aa-0.06□□□□□ -2.42
SEC8YPR055W TIM12P32830 109 aa-0.06□□□□□ -2.42
SEC8YPR055W YIL086CP40503 102 aa-0.06□□□□□ -2.42
SEC8YPR055W GNA1P43577 159 aaPredicted RBP-0.06□□□□□ -2.42
SEC8YPR055W RCF2P53721 224 aa-0.06□□□□□ -2.42
SEC8YPR055W PAU21P0CE86 164 aa-0.07□□□□□ -2.42
SEC8YPR055W PAU22P0CE87 164 aa-0.07□□□□□ -2.42
SEC8YPR055W YLR157W-EP0CF00 54 aa-0.07□□□□□ -2.42
SEC8YPR055W TOM6P33448 61 aa-0.07□□□□□ -2.42
SEC8YPR055W YMR141CP40211 102 aa-0.07□□□□□ -2.42
SEC8YPR055W LSM3P57743 89 aaKnown RBP-0.07□□□□□ -2.42
SEC8YPR055W GPI19Q04082 140 aa-0.07□□□□□ -2.42
SEC8YPR055W SEC16P48415 2195 aaKnown RBP-0.07□□□□□ -2.42
SEC8YPR055W MRPL31P14063 131 aaPredicted RBP-0.07□□□□□ -2.42
SEC8YPR055W RPL30P14120 105 aaKnown RBP-0.07□□□□□ -2.42
SEC8YPR055W YBR016WP38216 128 aa-0.07□□□□□ -2.42
SEC8YPR055W AIM4P38305 123 aaPredicted RBP-0.07□□□□□ -2.42
SEC8YPR055W AME1P38313 324 aa-0.07□□□□□ -2.42
SEC8YPR055W VMA21P41806 77 aa-0.07□□□□□ -2.42
SEC8YPR055W YDR102CQ03864 110 aa-0.07□□□□□ -2.42
SEC8YPR055W GPI11Q06636 219 aa-0.07□□□□□ -2.42
SEC8YPR055W MRPL38P35996 138 aaPredicted RBP-0.08□□□□□ -2.42
SEC8YPR055W QCR10P37299 77 aa-0.08□□□□□ -2.42
SEC8YPR055W YBR032WP38223 100 aa-0.08□□□□□ -2.42
SEC8YPR055W YER187WP40102 141 aa-0.08□□□□□ -2.42
SEC8YPR055W APS3P47064 194 aa-0.08□□□□□ -2.42
SEC8YPR055W BSC4P53841 131 aa-0.08□□□□□ -2.42
SEC8YPR055W PKR1Q03880 122 aaKnown RBP-0.08□□□□□ -2.42
SEC8YPR055W GIM5Q04493 163 aa-0.08□□□□□ -2.42
SEC8YPR055W RFU1Q08003 200 aa-0.08□□□□□ -2.42
SEC8YPR055W GTT2Q12390 233 aa-0.08□□□□□ -2.42
Retrieved 100 of 5,963 RNA–protein pairs in 8.9 ms