RNA–Protein interactions for RNA: YPL254W

HFI1, Transcript of Adaptor protein required for structural integrity of the SAGA complex, yeast

Gene HFI1, Length 1,467 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
HFI1	YPL254W	YHL044W	P38727	235 aa		4.17	□□□□□ -1.74
HFI1	YPL254W	VHS2	P40463	436 aa		4.17	□□□□□ -1.74
HFI1	YPL254W	MRPL49	P40858	161 aa	Predicted RBP	4.17	□□□□□ -1.74
HFI1	YPL254W	AIM34	Q03673	198 aa		4.17	□□□□□ -1.74
HFI1	YPL254W	YOR011W-A	Q3E807	68 aa		4.17	□□□□□ -1.74
HFI1	YPL254W	YKR041W	P36134	250 aa		4.16	□□□□□ -1.74
HFI1	YPL254W	YHR022C	P38763	256 aa		4.16	□□□□□ -1.74
HFI1	YPL254W	TOS6	P48560	102 aa		4.16	□□□□□ -1.74
HFI1	YPL254W	YCL021W-A	Q96VH3	125 aa		4.16	□□□□□ -1.74
HFI1	YPL254W	YER181C	P40097	107 aa		4.15	□□□□□ -1.75
HFI1	YPL254W	CAX4	P53223	239 aa		4.15	□□□□□ -1.75
HFI1	YPL254W	AIM11	P87275	137 aa		4.15	□□□□□ -1.75
HFI1	YPL254W	YKL023C-A	Q2V2P3	75 aa		4.15	□□□□□ -1.75
HFI1	YPL254W	YBR200W-A	Q3E755	54 aa		4.15	□□□□□ -1.75
HFI1	YPL254W	GCN1	P33892	2672 aa	Known RBP	4.14	□□□□□ -1.75
HFI1	YPL254W	ATP15	P21306	62 aa		4.14	□□□□□ -1.75
HFI1	YPL254W	YCR041W	P37265	110 aa		4.14	□□□□□ -1.75
HFI1	YPL254W	CIN5	P40917	295 aa		4.14	□□□□□ -1.75
HFI1	YPL254W	TOS8	P53147	276 aa		4.14	□□□□□ -1.75
HFI1	YPL254W	YOR097C	Q12274	175 aa	Predicted RBP	4.14	□□□□□ -1.75
HFI1	YPL254W	YOR008C-A	Q3E7B9	74 aa		4.14	□□□□□ -1.75
HFI1	YPL254W	VAR1	P02381	398 aa		4.13	□□□□□ -1.75
HFI1	YPL254W	MID2	P36027	376 aa		4.13	□□□□□ -1.75
HFI1	YPL254W	YER135C	P40082	130 aa		4.13	□□□□□ -1.75
HFI1	YPL254W	DCV1	P43595	202 aa		4.13	□□□□□ -1.75
HFI1	YPL254W	YIP3	P53633	176 aa		4.13	□□□□□ -1.75
HFI1	YPL254W	STF1	P01098	86 aa		4.12	□□□□□ -1.75
HFI1	YPL254W	RPL16B	P26785	198 aa	Known RBP	4.12	□□□□□ -1.75
HFI1	YPL254W	INO2	P26798	304 aa		4.12	□□□□□ -1.75
HFI1	YPL254W	YER085C	P40058	173 aa		4.12	□□□□□ -1.75
HFI1	YPL254W	YFL067W	P43537	175 aa		4.12	□□□□□ -1.75
HFI1	YPL254W	RPL28	P02406	149 aa	Known RBP	4.11	□□□□□ -1.75
HFI1	YPL254W	Q0255	P03881	472 aa		4.11	□□□□□ -1.75
HFI1	YPL254W	RPS8A	P0CX39	200 aa	Known RBP	4.11	□□□□□ -1.75
HFI1	YPL254W	RPS8B	P0CX40	200 aa	Known RBP	4.11	□□□□□ -1.75
HFI1	YPL254W	SIM1	P40472	476 aa		4.11	□□□□□ -1.75
HFI1	YPL254W	KEG1	P43614	200 aa		4.11	□□□□□ -1.75
HFI1	YPL254W	VPS55	P47111	140 aa		4.11	□□□□□ -1.75
HFI1	YPL254W	YGL088W	P53151	121 aa		4.11	□□□□□ -1.75
HFI1	YPL254W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.11	□□□□□ -1.75	not detected
HFI1	YPL254W	CCW12	Q12127	133 aa		4.11	□□□□□ -1.75
HFI1	YPL254W	IGO2	Q9P305	131 aa		4.11	□□□□□ -1.75
HFI1	YPL254W	RPL16A	P26784	199 aa	Known RBP	4.11	□□□□□ -1.75
HFI1	YPL254W	MIG3	P39943	394 aa		4.11	□□□□□ -1.75
HFI1	YPL254W	YFR035C	P43608	114 aa		4.11	□□□□□ -1.75
HFI1	YPL254W	YJR146W	P47174	117 aa		4.11	□□□□□ -1.75
HFI1	YPL254W	YNL190W	P53872	204 aa		4.11	□□□□□ -1.75
HFI1	YPL254W	YLR194C	Q05777	254 aa		4.11	□□□□□ -1.75
HFI1	YPL254W	PRM3	Q08931	133 aa		4.11	□□□□□ -1.75
HFI1	YPL254W	YER078W-A	Q3E7A2	54 aa		4.11	□□□□□ -1.75
HFI1	YPL254W	YNL146C-A	Q3E7Z1	64 aa		4.11	□□□□□ -1.75
HFI1	YPL254W	BPH1	P25356	2167 aa		4.1	□□□□□ -1.75
HFI1	YPL254W	NHP2	P32495	156 aa	Predicted RBP	4.1	□□□□□ -1.75
HFI1	YPL254W	YBR209W	P38311	105 aa		4.1	□□□□□ -1.75
HFI1	YPL254W	HOR7	Q05827	59 aa		4.1	□□□□□ -1.75
HFI1	YPL254W	LSM6	Q06406	86 aa	Known RBP	4.1	□□□□□ -1.75
HFI1	YPL254W	YLR042C	Q07990	161 aa		4.1	□□□□□ -1.75
HFI1	YPL254W	Q0297	Q9ZZV8	51 aa		4.1	□□□□□ -1.75
HFI1	YPL254W	YNL194C	P40169	301 aa		4.09	□□□□□ -1.75
HFI1	YPL254W	OST2	P46964	130 aa		4.09	□□□□□ -1.75
HFI1	YPL254W	MRPS12	P53732	153 aa		4.09	□□□□□ -1.75
HFI1	YPL254W	YMR244W	Q04018	355 aa		4.09	□□□□□ -1.75
HFI1	YPL254W	TEL1	P38110	2787 aa		4.08	□□□□□ -1.76
HFI1	YPL254W	RPL18A	P0CX49	186 aa	Known RBP	4.08	□□□□□ -1.76
HFI1	YPL254W	RPL18B	P0CX50	186 aa	Known RBP	4.08	□□□□□ -1.76
HFI1	YPL254W	INO4	P13902	151 aa		4.08	□□□□□ -1.76
HFI1	YPL254W	POP7	P38291	140 aa		4.08	□□□□□ -1.76
HFI1	YPL254W	ATX1	P38636	73 aa		4.08	□□□□□ -1.76
HFI1	YPL254W	YNL217W	P40152	326 aa		4.08	□□□□□ -1.76
HFI1	YPL254W	TAR1	Q8TGM6	124 aa		4.08	□□□□□ -1.76
HFI1	YPL254W	UGX2	P32772	223 aa		4.07	□□□□□ -1.76
HFI1	YPL254W	SPG4	Q04438	115 aa		4.07	□□□□□ -1.76
HFI1	YPL254W	HPA2	Q06592	156 aa		4.07	□□□□□ -1.76
HFI1	YPL254W	MRPL23	Q12487	163 aa	Predicted RBP	4.07	□□□□□ -1.76
HFI1	YPL254W	RRT13	P40042	185 aa		4.06	□□□□□ -1.76
HFI1	YPL254W	ABM1	P47146	123 aa		4.06	□□□□□ -1.76
HFI1	YPL254W	RRG8	Q06109	277 aa		4.06	□□□□□ -1.76
HFI1	YPL254W	RPA12	P32529	125 aa	Known RBP	4.05	□□□□□ -1.76
HFI1	YPL254W	DSE2	P38844	325 aa		4.05	□□□□□ -1.76
HFI1	YPL254W	MRPS8	Q03799	155 aa		4.05	□□□□□ -1.76
HFI1	YPL254W	SPO24	Q3E752	67 aa		4.05	□□□□□ -1.76
HFI1	YPL254W	ISD11	Q6Q560	94 aa		4.05	□□□□□ -1.76
HFI1	YPL254W	YPL229W	Q99395	206 aa		4.05	□□□□□ -1.76
HFI1	YPL254W	YEL008W	P40001	126 aa		4.05	□□□□□ -1.76
HFI1	YPL254W	FIP1	P45976	327 aa		4.05	□□□□□ -1.76
HFI1	YPL254W	URA2	P07259	2214 aa	Known RBP	4.04	□□□□□ -1.76
HFI1	YPL254W	TRP1	P00912	224 aa		4.04	□□□□□ -1.76
HFI1	YPL254W	SHU1	P38751	150 aa		4.04	□□□□□ -1.76
HFI1	YPL254W	PEX17	P40155	199 aa		4.04	□□□□□ -1.76
HFI1	YPL254W	YIL059C	P40520	121 aa		4.04	□□□□□ -1.76
HFI1	YPL254W	YFL065C	P43539	102 aa		4.04	□□□□□ -1.76
HFI1	YPL254W	EOS1	P53938	366 aa		4.04	□□□□□ -1.76
HFI1	YPL254W	ABF2	Q02486	183 aa		4.04	□□□□□ -1.76
HFI1	YPL254W	PBA1	Q05778	276 aa		4.04	□□□□□ -1.76
HFI1	YPL254W	YPR203W	Q08994	102 aa		4.04	□□□□□ -1.76
HFI1	YPL254W	CCW14	O13547	238 aa		4.03	□□□□□ -1.76
HFI1	YPL254W	YIA6	P40556	373 aa		4.03	□□□□□ -1.76
HFI1	YPL254W	YNL184C	P53876	108 aa		4.03	□□□□□ -1.76
HFI1	YPL254W	HHF1	P02309	103 aa	Known RBP	4.02	□□□□□ -1.77
HFI1	YPL254W	PRP8	P33334	2413 aa	Known RBP	4.01	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 120.7 ms