RNA–Protein interactions for RNA: YPL139C

UME1, Transcript of Component of both the Rpd3S and Rpd3L histone deacetylase complexes, yeastyeast

Gene UME1, Length 1,383 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UME1YPL139C VTS1Q08831 523 aaKnown RBP RIP-Chip data4.96□□□□□ -1.62not detected
UME1YPL139C YLR118CQ12354 227 aa4.96□□□□□ -1.62
UME1YPL139C YIR021W-AQ3E739 70 aa4.96□□□□□ -1.62
UME1YPL139C YNR034W-AQ3E841 98 aa4.96□□□□□ -1.62
UME1YPL139C SAL1D6W196 494 aa4.95□□□□□ -1.62
UME1YPL139C UGX2P32772 223 aa4.95□□□□□ -1.62
UME1YPL139C SDS23P53172 527 aa4.95□□□□□ -1.62
UME1YPL139C HMRA1P0CY11 126 aa4.94□□□□□ -1.62
UME1YPL139C VMA21P41806 77 aa4.94□□□□□ -1.62
UME1YPL139C GLC8P41818 229 aa4.94□□□□□ -1.62
UME1YPL139C YJL028WP47062 111 aa4.94□□□□□ -1.62
UME1YPL139C YOP1Q12402 180 aa4.93□□□□□ -1.62
UME1YPL139C RTC6O14464 93 aa4.92□□□□□ -1.62
UME1YPL139C RPL23AP0CX41 137 aaKnown RBP4.92□□□□□ -1.62
UME1YPL139C RPL23BP0CX42 137 aaKnown RBP4.92□□□□□ -1.62
UME1YPL139C FCF1Q05498 189 aaPredicted RBP4.92□□□□□ -1.62
UME1YPL139C YMR122W-AQ3E842 84 aa4.92□□□□□ -1.62
UME1YPL139C ADH3P07246 375 aaKnown RBP4.91□□□□□ -1.62
UME1YPL139C CNB1P25296 175 aa4.91□□□□□ -1.62
UME1YPL139C ATG8P38182 117 aaRIP-Chip data4.91□□□□□ -1.62not detected
UME1YPL139C SVP26P38869 228 aa4.91□□□□□ -1.62
UME1YPL139C HSP10P38910 106 aa4.91□□□□□ -1.62
UME1YPL139C TEM1P38987 245 aa4.91□□□□□ -1.62
UME1YPL139C PAU7P39545 55 aa4.91□□□□□ -1.62
UME1YPL139C ARC15P40518 154 aaRIP-Chip data4.91□□□□□ -1.62not detected
UME1YPL139C PAU5P43575 122 aa4.91□□□□□ -1.62
UME1YPL139C DCV1P43595 202 aa4.91□□□□□ -1.62
UME1YPL139C DAN1P47178 298 aa4.91□□□□□ -1.62
UME1YPL139C YGL088WP53151 121 aa4.91□□□□□ -1.62
UME1YPL139C PMP3P87284 55 aa4.91□□□□□ -1.62
UME1YPL139C TVP18Q04767 167 aa4.91□□□□□ -1.62
UME1YPL139C YCR024C-BQ3E7Z8 88 aa4.91□□□□□ -1.62
UME1YPL139C IGO2Q9P305 131 aa4.91□□□□□ -1.62
UME1YPL139C MRPL24P36525 258 aaPredicted RBP4.91□□□□□ -1.62
UME1YPL139C APS2Q00381 147 aa4.91□□□□□ -1.62
UME1YPL139C YMR320WQ04897 101 aa4.91□□□□□ -1.62
UME1YPL139C FSF1Q12029 327 aaKnown RBP4.91□□□□□ -1.62
UME1YPL139C RPL42AP0CX27 106 aaKnown RBP4.9□□□□□ -1.63
UME1YPL139C RPL42BP0CX28 106 aaKnown RBP4.9□□□□□ -1.63
UME1YPL139C SPT4P32914 102 aaPredicted RBP4.9□□□□□ -1.63
UME1YPL139C YBR013CP38215 129 aa4.9□□□□□ -1.63
UME1YPL139C ZEO1Q08245 113 aa4.9□□□□□ -1.63
UME1YPL139C YPL229WQ99395 206 aa4.9□□□□□ -1.63
UME1YPL139C SEC4P07560 215 aaKnown RBP4.89□□□□□ -1.63
UME1YPL139C PAU15P40585 124 aa4.89□□□□□ -1.63
UME1YPL139C RPL16AP26784 199 aaKnown RBP4.88□□□□□ -1.63
UME1YPL139C MRP49P32388 137 aa4.88□□□□□ -1.63
UME1YPL139C YBL081WP38180 368 aaKnown RBP4.88□□□□□ -1.63
UME1YPL139C YIL059CP40520 121 aa4.88□□□□□ -1.63
UME1YPL139C ERI1P62651 68 aaKnown RBP4.88□□□□□ -1.63
UME1YPL139C PRE1P22141 198 aaKnown RBP4.87□□□□□ -1.63
UME1YPL139C HAC1P41546 238 aa4.87□□□□□ -1.63
UME1YPL139C YBR209WP38311 105 aa4.86□□□□□ -1.63
UME1YPL139C YJR146WP47174 117 aa4.86□□□□□ -1.63
UME1YPL139C POR1P04840 283 aaKnown RBP4.85□□□□□ -1.63
UME1YPL139C YBR219CP38317 127 aa4.85□□□□□ -1.63
UME1YPL139C NSE4P43124 402 aa4.85□□□□□ -1.63
UME1YPL139C YIL014C-AQ02598 104 aa4.85□□□□□ -1.63
UME1YPL139C YPL257WQ08974 193 aa4.85□□□□□ -1.63
UME1YPL139C YDR034C-AP0C289 58 aa4.84□□□□□ -1.63
UME1YPL139C PEX22P39718 180 aa4.84□□□□□ -1.63
UME1YPL139C YNL184CP53876 108 aa4.84□□□□□ -1.63
UME1YPL139C MGR2Q02889 113 aa4.84□□□□□ -1.63
UME1YPL139C YDL085C-AQ3E7B7 68 aaKnown RBP4.84□□□□□ -1.63
UME1YPL139C AQY1P0CD91 305 aa4.83□□□□□ -1.64
UME1YPL139C CNL1Q06333 122 aa4.83□□□□□ -1.64
UME1YPL139C YPR014CQ6B0W2 109 aa4.83□□□□□ -1.64
UME1YPL139C YAR023CD6VPM8 179 aa4.82□□□□□ -1.64
UME1YPL139C PFY1P07274 126 aa4.82□□□□□ -1.64
UME1YPL139C PBI2P0CT04 75 aaKnown RBP4.82□□□□□ -1.64
UME1YPL139C SMP1P38128 452 aa4.82□□□□□ -1.64
UME1YPL139C YAL064WP39711 94 aa4.82□□□□□ -1.64
UME1YPL139C BET5Q03630 159 aa4.82□□□□□ -1.64
UME1YPL139C YPR010C-AA5Z2X5 72 aa4.81□□□□□ -1.64
UME1YPL139C YKR070WP36151 352 aaKnown RBP4.81□□□□□ -1.64
UME1YPL139C YEL008WP40001 126 aa4.81□□□□□ -1.64
UME1YPL139C YLR194CQ05777 254 aa4.8□□□□□ -1.64
UME1YPL139C PAU19P0CE85 124 aa4.79□□□□□ -1.64
UME1YPL139C PAU21P0CE86 164 aa4.79□□□□□ -1.64
UME1YPL139C PAU22P0CE87 164 aa4.79□□□□□ -1.64
UME1YPL139C PAU3P25610 124 aa4.79□□□□□ -1.64
UME1YPL139C HHO1P53551 258 aa4.79□□□□□ -1.64
UME1YPL139C COF1Q03048 143 aaKnown RBP4.79□□□□□ -1.64
UME1YPL139C RPS22BQ3E7Y3 130 aaKnown RBP4.79□□□□□ -1.64
UME1YPL139C TRP1P00912 224 aa4.78□□□□□ -1.64
UME1YPL139C LSM8P47093 109 aaKnown RBP4.78□□□□□ -1.64
UME1YPL139C TOS6P48560 102 aa4.78□□□□□ -1.64
UME1YPL139C SHH4Q06236 168 aa4.78□□□□□ -1.64
UME1YPL139C APS1P35181 156 aa4.77□□□□□ -1.65
UME1YPL139C RPC10P40422 70 aa4.77□□□□□ -1.65
UME1YPL139C CYT2Q00873 224 aa4.77□□□□□ -1.65
UME1YPL139C HMRA2P0CY13 119 aa4.76□□□□□ -1.65
UME1YPL139C RPF1P38805 295 aaKnown RBP4.76□□□□□ -1.65
UME1YPL139C OST2P46964 130 aa4.76□□□□□ -1.65
UME1YPL139C YMR295CQ03559 197 aa4.76□□□□□ -1.65
UME1YPL139C YDR029WQ12111 104 aa4.76□□□□□ -1.65
UME1YPL139C DFM1Q12743 341 aaKnown RBP4.76□□□□□ -1.65
UME1YPL139C COA3Q3E7B2 85 aa4.76□□□□□ -1.65
UME1YPL139C YOR008C-AQ3E7B9 74 aa4.75□□□□□ -1.65
UME1YPL139C YLR307C-AQ3E825 87 aa4.75□□□□□ -1.65
Retrieved 100 of 5,963 RNA–protein pairs in 24.4 ms