RNA–Protein interactions for RNA: YOR138C

RUP1, Transcript of Protein that regulates ubiquitination of Rsp5p, yeastyeast

Gene RUP1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RUP1YOR138C YBR200W-AQ3E755 54 aa5.76□□□□□ -1.49
RUP1YOR138C MID2P36027 376 aa5.75□□□□□ -1.49
RUP1YOR138C YNL217WP40152 326 aa5.75□□□□□ -1.49
RUP1YOR138C OST2P46964 130 aa5.75□□□□□ -1.49
RUP1YOR138C YIP3P53633 176 aa5.75□□□□□ -1.49
RUP1YOR138C YLR194CQ05777 254 aa5.75□□□□□ -1.49
RUP1YOR138C LSM6Q06406 86 aaKnown RBP5.75□□□□□ -1.49
RUP1YOR138C PRM3Q08931 133 aa5.75□□□□□ -1.49
RUP1YOR138C CAX4P53223 239 aa5.75□□□□□ -1.49
RUP1YOR138C RPL28P02406 149 aaKnown RBP5.74□□□□□ -1.49
RUP1YOR138C RPS8AP0CX39 200 aaKnown RBP5.74□□□□□ -1.49
RUP1YOR138C RPS8BP0CX40 200 aaKnown RBP5.74□□□□□ -1.49
RUP1YOR138C INO4P13902 151 aa5.74□□□□□ -1.49
RUP1YOR138C HPA2Q06592 156 aa5.74□□□□□ -1.49
RUP1YOR138C Q0255P03881 472 aa5.74□□□□□ -1.49
RUP1YOR138C YER135CP40082 130 aa5.74□□□□□ -1.49
RUP1YOR138C CCW12Q12127 133 aa5.74□□□□□ -1.49
RUP1YOR138C GCN1P33892 2672 aaKnown RBP5.73□□□□□ -1.49
RUP1YOR138C RPL16BP26785 198 aaKnown RBP5.73□□□□□ -1.49
RUP1YOR138C DUT1P33317 147 aa5.73□□□□□ -1.49
RUP1YOR138C YBR056W-AI2HB52 66 aa5.72□□□□□ -1.49
RUP1YOR138C RPL18AP0CX49 186 aaKnown RBP5.72□□□□□ -1.49
RUP1YOR138C RPL18BP0CX50 186 aaKnown RBP5.72□□□□□ -1.49
RUP1YOR138C RPL16AP26784 199 aaKnown RBP5.72□□□□□ -1.49
RUP1YOR138C ISD11Q6Q560 94 aa5.72□□□□□ -1.49
RUP1YOR138C YBR209WP38311 105 aa5.72□□□□□ -1.49
RUP1YOR138C YMR317WQ04893 1140 aa5.72□□□□□ -1.49
RUP1YOR138C RRG8Q06109 277 aa5.72□□□□□ -1.49
RUP1YOR138C INO2P26798 304 aa5.71□□□□□ -1.5
RUP1YOR138C VPS55P47111 140 aa5.71□□□□□ -1.5
RUP1YOR138C YJR146WP47174 117 aa5.71□□□□□ -1.5
RUP1YOR138C YGL088WP53151 121 aa5.71□□□□□ -1.5
RUP1YOR138C YNL190WP53872 204 aa5.71□□□□□ -1.5
RUP1YOR138C YLR042CQ07990 161 aa5.71□□□□□ -1.5
RUP1YOR138C YNL146C-AQ3E7Z1 64 aa5.71□□□□□ -1.5
RUP1YOR138C YNL194CP40169 301 aa5.7□□□□□ -1.5
RUP1YOR138C HOR7Q05827 59 aa5.7□□□□□ -1.5
RUP1YOR138C SIM1P40472 476 aa5.7□□□□□ -1.5
RUP1YOR138C ABM1P47146 123 aa5.69□□□□□ -1.5
RUP1YOR138C SPO24Q3E752 67 aa5.69□□□□□ -1.5
RUP1YOR138C RPA12P32529 125 aaKnown RBP5.69□□□□□ -1.5
RUP1YOR138C YKL069WP36088 180 aa5.69□□□□□ -1.5
RUP1YOR138C MIG3P39943 394 aa5.69□□□□□ -1.5
RUP1YOR138C UGX2P32772 223 aa5.68□□□□□ -1.5
RUP1YOR138C DSE2P38844 325 aa5.68□□□□□ -1.5
RUP1YOR138C YFL065CP43539 102 aa5.68□□□□□ -1.5
RUP1YOR138C ABF2Q02486 183 aa5.68□□□□□ -1.5
RUP1YOR138C YPR203WQ08994 102 aa5.68□□□□□ -1.5
RUP1YOR138C MRPL23Q12487 163 aaPredicted RBP5.68□□□□□ -1.5
RUP1YOR138C CCW14O13547 238 aa5.67□□□□□ -1.5
RUP1YOR138C SPG4Q04438 115 aa5.67□□□□□ -1.5
RUP1YOR138C PEX17P40155 199 aa5.67□□□□□ -1.5
RUP1YOR138C YNL184CP53876 108 aa5.67□□□□□ -1.5
RUP1YOR138C YMR244WQ04018 355 aa5.67□□□□□ -1.5
RUP1YOR138C SRL1Q08673 210 aa5.67□□□□□ -1.5
RUP1YOR138C RPL15AP05748 204 aaKnown RBP5.66□□□□□ -1.5
RUP1YOR138C YFR035CP43608 114 aa5.66□□□□□ -1.5
RUP1YOR138C MRPS12P53732 153 aa5.66□□□□□ -1.5
RUP1YOR138C YIL059CP40520 121 aa5.65□□□□□ -1.5
RUP1YOR138C FIP1P45976 327 aa5.65□□□□□ -1.5
RUP1YOR138C YCL021W-AQ96VH3 125 aa5.65□□□□□ -1.5
RUP1YOR138C URA2P07259 2214 aaKnown RBP5.65□□□□□ -1.5
RUP1YOR138C TRP1P00912 224 aa5.65□□□□□ -1.51
RUP1YOR138C SHU1P38751 150 aa5.65□□□□□ -1.51
RUP1YOR138C YNL092WP53934 400 aa5.65□□□□□ -1.51
RUP1YOR138C MRPS8Q03799 155 aa5.65□□□□□ -1.51
RUP1YOR138C RRT13P40042 185 aa5.64□□□□□ -1.51
RUP1YOR138C YIA6P40556 373 aa5.64□□□□□ -1.51
RUP1YOR138C RPP2AP05319 106 aaKnown RBP5.64□□□□□ -1.51
RUP1YOR138C YEL008WP40001 126 aa5.64□□□□□ -1.51
RUP1YOR138C YAR1P46683 200 aa5.64□□□□□ -1.51
RUP1YOR138C EOS1P53938 366 aa5.64□□□□□ -1.51
RUP1YOR138C YCR075W-AQ3E830 75 aa5.64□□□□□ -1.51
RUP1YOR138C Q0297Q9ZZV8 51 aa5.63□□□□□ -1.51
RUP1YOR138C TAR1Q8TGM6 124 aa5.62□□□□□ -1.51
RUP1YOR138C YCR041WP37265 110 aa5.62□□□□□ -1.51
RUP1YOR138C COX10P21592 462 aa5.61□□□□□ -1.51
RUP1YOR138C YHR130CP38834 111 aa5.61□□□□□ -1.51
RUP1YOR138C YPL229WQ99395 206 aa5.61□□□□□ -1.51
RUP1YOR138C PMP3P87284 55 aa5.6□□□□□ -1.51
RUP1YOR138C NRG2P38082 220 aa5.59□□□□□ -1.51
RUP1YOR138C QCR8P08525 94 aa5.58□□□□□ -1.52
RUP1YOR138C ALG13P53178 202 aa5.58□□□□□ -1.52
RUP1YOR138C YAL063C-AQ3E791 96 aa5.58□□□□□ -1.52
RUP1YOR138C AIM19P40502 157 aa5.57□□□□□ -1.52
RUP1YOR138C PRP8P33334 2413 aaKnown RBP5.57□□□□□ -1.52
RUP1YOR138C YCR085WP25650 117 aa5.57□□□□□ -1.52
RUP1YOR138C YCH1P42937 148 aa5.57□□□□□ -1.52
RUP1YOR138C HUR1P45820 110 aa5.57□□□□□ -1.52
RUP1YOR138C RPL2AP0CX45 254 aaKnown RBP5.56□□□□□ -1.52
RUP1YOR138C RPL2BP0CX46 254 aaKnown RBP5.56□□□□□ -1.52
RUP1YOR138C YMR295CQ03559 197 aa5.56□□□□□ -1.52
RUP1YOR138C RPS11AP0CX47 156 aaKnown RBP5.55□□□□□ -1.52
RUP1YOR138C RPS11BP0CX48 156 aaKnown RBP5.55□□□□□ -1.52
RUP1YOR138C YOR304C-AO14468 76 aa5.55□□□□□ -1.52
RUP1YOR138C PBI2P0CT04 75 aaKnown RBP5.55□□□□□ -1.52
RUP1YOR138C SKI6P46948 246 aaPredicted RBP5.55□□□□□ -1.52
RUP1YOR138C UBC5P15732 148 aa5.54□□□□□ -1.52
RUP1YOR138C PBA1Q05778 276 aa5.54□□□□□ -1.52
RUP1YOR138C PPT2Q12036 173 aa5.54□□□□□ -1.52
Retrieved 100 of 5,963 RNA–protein pairs in 11.7 ms