RNA–Protein interactions for RNA: YOR078W

BUD21, Transcript of Component of small ribosomal subunit (SSU) processosome, yeastyeast

Gene BUD21, Length 645 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BUD21YOR078W UBC4P15731 148 aa2.39□□□□□ -2.03
BUD21YOR078W RPL16BP26785 198 aaKnown RBP2.39□□□□□ -2.03
BUD21YOR078W IES6P32617 166 aa2.39□□□□□ -2.03
BUD21YOR078W AIM19P40502 157 aa2.39□□□□□ -2.03
BUD21YOR078W SGN1P40561 250 aaKnown RBP RIP-Chip data2.39□□□□□ -2.03not detected
BUD21YOR078W UBC13P52490 153 aa2.39□□□□□ -2.03
BUD21YOR078W VEL1P53058 206 aa2.39□□□□□ -2.03
BUD21YOR078W TOM7P53507 60 aa2.39□□□□□ -2.03
BUD21YOR078W YNR077CP53758 84 aa2.39□□□□□ -2.03
BUD21YOR078W SWS2P53937 143 aa2.39□□□□□ -2.03
BUD21YOR078W YNL046WP53956 172 aa2.39□□□□□ -2.03
BUD21YOR078W FIT2Q08906 153 aa2.39□□□□□ -2.03
BUD21YOR078W YMR175W-AQ3E766 64 aa2.39□□□□□ -2.03
BUD21YOR078W CCH1P50077 2039 aa2.39□□□□□ -2.03
BUD21YOR078W HMRA2P0CY13 119 aa2.38□□□□□ -2.03
BUD21YOR078W RPL30P14120 105 aaKnown RBP2.38□□□□□ -2.03
BUD21YOR078W PET8P38921 284 aa2.38□□□□□ -2.03
BUD21YOR078W YEL067CP39978 195 aa2.38□□□□□ -2.03
BUD21YOR078W YER187WP40102 141 aa2.38□□□□□ -2.03
BUD21YOR078W VHS2P40463 436 aa2.38□□□□□ -2.03
BUD21YOR078W YFR054CP43622 192 aa2.38□□□□□ -2.03
BUD21YOR078W MIX14Q04341 121 aa2.38□□□□□ -2.03
BUD21YOR078W YLR194CQ05777 254 aa2.38□□□□□ -2.03
BUD21YOR078W IRC19Q07843 230 aa2.38□□□□□ -2.03
BUD21YOR078W IRC23Q08416 157 aa2.38□□□□□ -2.03
BUD21YOR078W NIP7Q08962 181 aaKnown RBP2.38□□□□□ -2.03
BUD21YOR078W NCE102Q12207 173 aaRIP-Chip data2.38□□□□□ -2.03not detected
BUD21YOR078W YOR343CQ12484 108 aa2.38□□□□□ -2.03
BUD21YOR078W PFY1P07274 126 aa2.37□□□□□ -2.03
BUD21YOR078W ARF2P19146 181 aaKnown RBP2.37□□□□□ -2.03
BUD21YOR078W YKR032WP36127 104 aa2.37□□□□□ -2.03
BUD21YOR078W MED6P38782 295 aa2.37□□□□□ -2.03
BUD21YOR078W MPC2P38857 129 aa2.37□□□□□ -2.03
BUD21YOR078W HUA1P40325 198 aa2.37□□□□□ -2.03
BUD21YOR078W NRM1P53718 249 aa2.37□□□□□ -2.03
BUD21YOR078W DAD4P69851 72 aa2.37□□□□□ -2.03
BUD21YOR078W MGR2Q02889 113 aa2.37□□□□□ -2.03
BUD21YOR078W YMR295CQ03559 197 aa2.37□□□□□ -2.03
BUD21YOR078W YHP1Q04116 353 aa2.37□□□□□ -2.03
BUD21YOR078W TIM22Q12328 207 aa2.37□□□□□ -2.03
BUD21YOR078W YGL258W-AQ3E740 77 aa2.37□□□□□ -2.03
BUD21YOR078W YBR126W-AQ8TGU7 68 aa2.37□□□□□ -2.03
BUD21YOR078W SPT4P32914 102 aaPredicted RBP2.36□□□□□ -2.03
BUD21YOR078W YBR209WP38311 105 aa2.36□□□□□ -2.03
BUD21YOR078W CTR2P38865 189 aa2.36□□□□□ -2.03
BUD21YOR078W VTC1P40046 129 aaRIP-Chip data2.36□□□□□ -2.03not detected
BUD21YOR078W YFL019CP43576 117 aa2.36□□□□□ -2.03
BUD21YOR078W NCE101Q02820 53 aa2.36□□□□□ -2.03
BUD21YOR078W API2Q04413 109 aa2.36□□□□□ -2.03
BUD21YOR078W PBP4Q07362 185 aaKnown RBP2.36□□□□□ -2.03
BUD21YOR078W YOL118CQ08259 102 aa2.36□□□□□ -2.03
BUD21YOR078W YOR192C-CQ3E736 78 aa2.36□□□□□ -2.03
BUD21YOR078W MDM35O60200 86 aa2.35□□□□□ -2.03
BUD21YOR078W MXR2P25566 168 aa2.35□□□□□ -2.03
BUD21YOR078W AIM4P38305 123 aaPredicted RBP2.35□□□□□ -2.03
BUD21YOR078W PEX17P40155 199 aa2.35□□□□□ -2.03
BUD21YOR078W DCV1P43595 202 aa2.35□□□□□ -2.03
BUD21YOR078W KEG1P43614 200 aa2.35□□□□□ -2.03
BUD21YOR078W TOS6P48560 102 aa2.35□□□□□ -2.03
BUD21YOR078W YMR181CQ03231 154 aa2.35□□□□□ -2.03
BUD21YOR078W COA3Q3E7B2 85 aa2.35□□□□□ -2.03
BUD21YOR078W YHR214C-EQ8TGK0 99 aa2.35□□□□□ -2.03
BUD21YOR078W MIC10Q96VH5 97 aa2.35□□□□□ -2.03
BUD21YOR078W YDL022C-AP0C5L6 82 aa2.34□□□□□ -2.03
BUD21YOR078W YHR214C-DP0CX93 97 aa2.34□□□□□ -2.03
BUD21YOR078W RPL16AP26784 199 aaKnown RBP2.34□□□□□ -2.03
BUD21YOR078W YBR144CP34215 104 aa2.34□□□□□ -2.03
BUD21YOR078W YHR022CP38763 256 aa2.34□□□□□ -2.03
BUD21YOR078W RSM18P40033 138 aa2.34□□□□□ -2.03
BUD21YOR078W YNL208WP40159 199 aaKnown RBP2.34□□□□□ -2.03
BUD21YOR078W YMR141CP40211 102 aa2.34□□□□□ -2.03
BUD21YOR078W GAT4P40569 121 aa2.34□□□□□ -2.03
BUD21YOR078W HUR1P45820 110 aa2.34□□□□□ -2.03
BUD21YOR078W PIR5P46999 287 aa2.34□□□□□ -2.03
BUD21YOR078W ICY1Q04329 127 aa2.34□□□□□ -2.03
BUD21YOR078W YLR285C-AQ3E771 56 aa2.34□□□□□ -2.03
BUD21YOR078W RRT15Q3E811 62 aa2.34□□□□□ -2.03
BUD21YOR078W CCW14O13547 238 aa2.33□□□□□ -2.04
BUD21YOR078W RPS14AP06367 137 aaKnown RBP2.33□□□□□ -2.04
BUD21YOR078W SPS100P13130 326 aa2.33□□□□□ -2.04
BUD21YOR078W RPS14BP39516 138 aaKnown RBP2.33□□□□□ -2.04
BUD21YOR078W TDA2P40045 126 aa2.33□□□□□ -2.04
BUD21YOR078W SPI1P40092 148 aa2.33□□□□□ -2.04
BUD21YOR078W YIL029CP40538 142 aa2.33□□□□□ -2.04
BUD21YOR078W ICS3P47034 131 aa2.33□□□□□ -2.04
BUD21YOR078W SPO24Q3E752 67 aa2.33□□□□□ -2.04
BUD21YOR078W TDA8Q6B2U8 126 aa2.33□□□□□ -2.04
BUD21YOR078W YHR213WP0CI67 198 aa2.32□□□□□ -2.04
BUD21YOR078W YBL081WP38180 368 aaKnown RBP2.32□□□□□ -2.04
BUD21YOR078W YBL071CP38185 102 aa2.32□□□□□ -2.04
BUD21YOR078W ECO1P43605 281 aa2.32□□□□□ -2.04
BUD21YOR078W SMD1Q02260 146 aaPredicted RBP2.32□□□□□ -2.04
BUD21YOR078W VPS68Q12016 184 aa2.32□□□□□ -2.04
BUD21YOR078W ATP20Q12233 115 aa2.32□□□□□ -2.04
BUD21YOR078W YOR008C-AQ3E7B9 74 aa2.32□□□□□ -2.04
BUD21YOR078W YOR381W-AQ3E804 55 aa2.32□□□□□ -2.04
BUD21YOR078W YLR342W-AQ3E810 57 aa2.32□□□□□ -2.04
BUD21YOR078W YAL064W-BO13512 126 aa2.31□□□□□ -2.04
BUD21YOR078W RPL26AP05743 127 aaKnown RBP2.31□□□□□ -2.04
BUD21YOR078W YSF3P0C074 85 aaPredicted RBP2.31□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 60.7 ms