RNA–Protein interactions for RNA: YOR054C

VHS3, Transcript of Negative regulatory subunit of protein phosphatase 1 Ppz1p, yeastyeast

Gene VHS3, Length 2,025 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VHS3YOR054C RPL42BP0CX28 106 aaKnown RBP3.27□□□□□ -1.89
VHS3YOR054C HSP150P32478 413 aa3.27□□□□□ -1.89
VHS3YOR054C IES6P32617 166 aa3.27□□□□□ -1.89
VHS3YOR054C YRA2P36036 203 aaKnown RBP RIP-Chip data3.27□□□□□ -1.89not detected
VHS3YOR054C ECO1P43605 281 aa3.27□□□□□ -1.89
VHS3YOR054C NRM1P53718 249 aa3.27□□□□□ -1.89
VHS3YOR054C SDC1Q03323 175 aa3.27□□□□□ -1.89
VHS3YOR054C SHH4Q06236 168 aa3.27□□□□□ -1.89
VHS3YOR054C IRA1P18963 3092 aa3.27□□□□□ -1.89
VHS3YOR054C YAL064W-BO13512 126 aa3.26□□□□□ -1.89
VHS3YOR054C GLE2P40066 365 aa3.26□□□□□ -1.89
VHS3YOR054C SFT1P43682 97 aa3.26□□□□□ -1.89
VHS3YOR054C ATP23P53722 227 aa3.26□□□□□ -1.89
VHS3YOR054C HNT3Q08702 217 aa3.26□□□□□ -1.89
VHS3YOR054C NCE102Q12207 173 aaRIP-Chip data3.26□□□□□ -1.89not detected
VHS3YOR054C YMR175W-AQ3E766 64 aa3.26□□□□□ -1.89
VHS3YOR054C COA3Q3E7B2 85 aa3.26□□□□□ -1.89
VHS3YOR054C YIL046W-AQ3E7Z4 54 aa3.26□□□□□ -1.89
VHS3YOR054C BLM10P43583 2143 aa3.26□□□□□ -1.89
VHS3YOR054C RPL18AP0CX49 186 aaKnown RBP3.26□□□□□ -1.89
VHS3YOR054C RPL18BP0CX50 186 aaKnown RBP3.26□□□□□ -1.89
VHS3YOR054C ARF1P11076 181 aaKnown RBP3.26□□□□□ -1.89
VHS3YOR054C YMR31P19955 123 aa3.26□□□□□ -1.89
VHS3YOR054C LYS1P38998 373 aaRIP-Chip data3.26□□□□□ -1.89not detected
VHS3YOR054C SIM1P40472 476 aa3.26□□□□□ -1.89
VHS3YOR054C YGR164WP53291 111 aa3.26□□□□□ -1.89
VHS3YOR054C YGR219WP53307 113 aa3.26□□□□□ -1.89
VHS3YOR054C YLR194CQ05777 254 aa3.26□□□□□ -1.89
VHS3YOR054C HFA1P32874 2273 aa3.25□□□□□ -1.89
VHS3YOR054C PFY1P07274 126 aa3.25□□□□□ -1.89
VHS3YOR054C YSF3P0C074 85 aaPredicted RBP3.25□□□□□ -1.89
VHS3YOR054C BET1P22804 142 aa3.25□□□□□ -1.89
VHS3YOR054C AGA1P32323 725 aa3.25□□□□□ -1.89
VHS3YOR054C AIM19P40502 157 aa3.25□□□□□ -1.89
VHS3YOR054C YDR209CQ03480 137 aa3.25□□□□□ -1.89
VHS3YOR054C TRS23Q03784 219 aa3.25□□□□□ -1.89
VHS3YOR054C PBA1Q05778 276 aa3.25□□□□□ -1.89
VHS3YOR054C YLR281CQ05863 155 aa3.25□□□□□ -1.89
VHS3YOR054C RRS1Q08746 203 aaKnown RBP3.25□□□□□ -1.89
VHS3YOR054C YSY6P38374 65 aa3.24□□□□□ -1.89
VHS3YOR054C YER187WP40102 141 aa3.24□□□□□ -1.89
VHS3YOR054C URM1P40554 99 aaPredicted RBP3.24□□□□□ -1.89
VHS3YOR054C YBR126W-AQ8TGU7 68 aa3.24□□□□□ -1.89
VHS3YOR054C SEC16P48415 2195 aaKnown RBP3.24□□□□□ -1.89
VHS3YOR054C MXR2P25566 168 aa3.24□□□□□ -1.89
VHS3YOR054C YAR029WP39549 74 aa3.24□□□□□ -1.89
VHS3YOR054C YIL029CP40538 142 aa3.24□□□□□ -1.89
VHS3YOR054C HSK3P69852 69 aa3.24□□□□□ -1.89
VHS3YOR054C YMR181CQ03231 154 aa3.24□□□□□ -1.89
VHS3YOR054C NIP7Q08962 181 aaKnown RBP3.24□□□□□ -1.89
VHS3YOR054C EMC6Q12431 108 aa3.24□□□□□ -1.89
VHS3YOR054C YNL277W-AQ3E7Z0 62 aa3.24□□□□□ -1.89
VHS3YOR054C YCR022CP25620 114 aa3.23□□□□□ -1.89
VHS3YOR054C TOS6P48560 102 aa3.23□□□□□ -1.89
VHS3YOR054C HAL1Q01766 294 aa3.23□□□□□ -1.89
VHS3YOR054C GAT3Q07928 141 aa3.23□□□□□ -1.89
VHS3YOR054C PRM7Q12459 698 aa3.23□□□□□ -1.89
VHS3YOR054C RPL16BP26785 198 aaKnown RBP3.22□□□□□ -1.89
VHS3YOR054C YBR209WP38311 105 aa3.22□□□□□ -1.89
VHS3YOR054C YGR018CP53211 109 aa3.22□□□□□ -1.89
VHS3YOR054C YLR122CQ12312 125 aa3.22□□□□□ -1.89
VHS3YOR054C RPS16AP0CX51 143 aaKnown RBP3.22□□□□□ -1.89
VHS3YOR054C RPS16BP0CX52 143 aaKnown RBP3.22□□□□□ -1.89
VHS3YOR054C UBC4P15731 148 aa3.22□□□□□ -1.89
VHS3YOR054C LDB16P25587 256 aa3.22□□□□□ -1.89
VHS3YOR054C PCP1P53259 346 aa3.22□□□□□ -1.89
VHS3YOR054C YNL190WP53872 204 aa3.22□□□□□ -1.89
VHS3YOR054C NAG1Q8TGN9 163 aa3.22□□□□□ -1.89
VHS3YOR054C RPL28P02406 149 aaKnown RBP3.21□□□□□ -1.9
VHS3YOR054C RPL43AP0CX25 92 aaKnown RBP3.21□□□□□ -1.9
VHS3YOR054C RPL43BP0CX26 92 aa3.21□□□□□ -1.9
VHS3YOR054C YBL071CP38185 102 aa3.21□□□□□ -1.9
VHS3YOR054C MPC2P38857 129 aa3.21□□□□□ -1.9
VHS3YOR054C SPI1P40092 148 aa3.21□□□□□ -1.9
VHS3YOR054C GLT1Q12680 2145 aaKnown RBP3.21□□□□□ -1.9
VHS3YOR054C RPS27AP35997 82 aaKnown RBP3.2□□□□□ -1.9
VHS3YOR054C RPS27BP38711 82 aa3.2□□□□□ -1.9
VHS3YOR054C MMS2P53152 137 aa3.2□□□□□ -1.9
VHS3YOR054C ATP15P21306 62 aa3.2□□□□□ -1.9
VHS3YOR054C YFL019CP43576 117 aa3.2□□□□□ -1.9
VHS3YOR054C YLR342W-AQ3E810 57 aa3.2□□□□□ -1.9
VHS3YOR054C DCV1P43595 202 aa3.19□□□□□ -1.9
VHS3YOR054C MRPS12P53732 153 aa3.19□□□□□ -1.9
VHS3YOR054C YML122CQ03207 126 aa3.19□□□□□ -1.9
VHS3YOR054C YDR246W-AQ3E763 66 aa3.19□□□□□ -1.9
VHS3YOR054C RRT15Q3E811 62 aa3.19□□□□□ -1.9
VHS3YOR054C TDA8Q6B2U8 126 aa3.19□□□□□ -1.9
VHS3YOR054C MTC6P38849 526 aa3.19□□□□□ -1.9
VHS3YOR054C PEX22P39718 180 aa3.19□□□□□ -1.9
VHS3YOR054C GLO1P50107 326 aa3.19□□□□□ -1.9
VHS3YOR054C PPT2Q12036 173 aa3.19□□□□□ -1.9
VHS3YOR054C YHR213WP0CI67 198 aa3.18□□□□□ -1.9
VHS3YOR054C MSA2P36157 363 aa3.18□□□□□ -1.9
VHS3YOR054C CTR2P38865 189 aa3.18□□□□□ -1.9
VHS3YOR054C HUR1P45820 110 aa3.18□□□□□ -1.9
VHS3YOR054C RSM19P53733 91 aaPredicted RBP3.18□□□□□ -1.9
VHS3YOR054C YLR285C-AQ3E771 56 aa3.18□□□□□ -1.9
VHS3YOR054C YOR008C-AQ3E7B9 74 aa3.18□□□□□ -1.9
VHS3YOR054C MEC1P38111 2368 aa3.17□□□□□ -1.9
VHS3YOR054C PBP4Q07362 185 aaKnown RBP3.17□□□□□ -1.9
Retrieved 100 of 5,963 RNA–protein pairs in 22.5 ms