RNA–Protein interactions for RNA: YOR035C

SHE4, Transcript of Protein containing a UCS (UNC-45/CRO1/SHE4) domain, yeastyeast

Gene SHE4, Length 2,370 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHE4YOR035C IPT1P38954 527 aa0.63□□□□□ -2.31
SHE4YOR035C MOG1P47123 218 aa0.63□□□□□ -2.31
SHE4YOR035C YNL122CP53921 115 aaPredicted RBP0.63□□□□□ -2.31
SHE4YOR035C LCL1Q02786 101 aa0.63□□□□□ -2.31
SHE4YOR035C EST3Q03096 181 aa0.63□□□□□ -2.31
SHE4YOR035C NMA1Q06178 401 aaKnown RBP0.63□□□□□ -2.31
SHE4YOR035C YPD1Q07688 167 aa0.63□□□□□ -2.31
SHE4YOR035C YHR213W-BQ8TGK1 99 aa0.63□□□□□ -2.31
SHE4YOR035C YER137CP40083 148 aaKnown RBP0.63□□□□□ -2.31
SHE4YOR035C RPS29BP41058 56 aaKnown RBP0.63□□□□□ -2.31
SHE4YOR035C PKR1Q03880 122 aaKnown RBP0.62□□□□□ -2.31
SHE4YOR035C RAV2Q03956 351 aa0.62□□□□□ -2.31
SHE4YOR035C YDR278CQ05612 105 aa0.62□□□□□ -2.31
SHE4YOR035C YGL041W-AP0C5N3 154 aa0.62□□□□□ -2.31
SHE4YOR035C YGR201CP42936 225 aa0.62□□□□□ -2.31
SHE4YOR035C YPL067CQ02754 198 aa0.62□□□□□ -2.31
SHE4YOR035C SCS22Q6Q595 175 aa0.62□□□□□ -2.31
SHE4YOR035C HSP12P22943 109 aaKnown RBP0.61□□□□□ -2.31
SHE4YOR035C HYP2P23301 157 aaKnown RBP0.61□□□□□ -2.31
SHE4YOR035C HHY1P39982 102 aa0.61□□□□□ -2.31
SHE4YOR035C YPR153WQ06537 140 aa0.61□□□□□ -2.31
SHE4YOR035C RRT7Q07829 113 aa0.61□□□□□ -2.31
SHE4YOR035C YOR072WQ08486 104 aa0.61□□□□□ -2.31
SHE4YOR035C COX5BP00425 151 aa0.61□□□□□ -2.31
SHE4YOR035C YLR307C-AQ3E825 87 aa0.61□□□□□ -2.31
SHE4YOR035C ACP1P32463 125 aa0.6□□□□□ -2.31
SHE4YOR035C YDR034C-AP0C289 58 aa0.6□□□□□ -2.31
SHE4YOR035C TIM12P32830 109 aa0.6□□□□□ -2.31
SHE4YOR035C ATG8P38182 117 aaRIP-Chip data0.6□□□□□ -2.31not detected
SHE4YOR035C GPI2P46961 280 aa0.6□□□□□ -2.31
SHE4YOR035C LSM1P47017 172 aaKnown RBP0.6□□□□□ -2.31
SHE4YOR035C MGR2Q02889 113 aa0.6□□□□□ -2.31
SHE4YOR035C GPI11Q06636 219 aa0.6□□□□□ -2.31
SHE4YOR035C RIB3Q99258 208 aa0.6□□□□□ -2.31
SHE4YOR035C FYV5P25585 152 aa0.59□□□□□ -2.32
SHE4YOR035C YCL001W-AP87012 153 aa0.59□□□□□ -2.32
SHE4YOR035C NHP6AP11632 93 aaKnown RBP0.58□□□□□ -2.32
SHE4YOR035C RPS1BP23248 255 aaKnown RBP0.58□□□□□ -2.32
SHE4YOR035C YHR140WP38842 239 aa0.58□□□□□ -2.32
SHE4YOR035C ATP19P81451 68 aa0.58□□□□□ -2.32
SHE4YOR035C COF1Q03048 143 aaKnown RBP0.58□□□□□ -2.32
SHE4YOR035C SEN15Q04675 128 aa0.58□□□□□ -2.32
SHE4YOR035C SOM1Q05676 74 aa0.58□□□□□ -2.32
SHE4YOR035C SPC1P46965 94 aa0.57□□□□□ -2.32
SHE4YOR035C RBL2P48606 106 aaKnown RBP0.57□□□□□ -2.32
SHE4YOR035C DIE2P50076 525 aa0.57□□□□□ -2.32
SHE4YOR035C YDR366CP87287 132 aa0.57□□□□□ -2.32
SHE4YOR035C YOR385WQ08909 290 aa0.57□□□□□ -2.32
SHE4YOR035C MHF2Q3E829 80 aa0.57□□□□□ -2.32
SHE4YOR035C YGL204CP53089 101 aa0.57□□□□□ -2.32
SHE4YOR035C RPL33AP05744 107 aaKnown RBP0.56□□□□□ -2.32
SHE4YOR035C RPS22AP0C0W1 130 aaKnown RBP0.56□□□□□ -2.32
SHE4YOR035C SPC3Q12133 184 aa0.56□□□□□ -2.32
SHE4YOR035C HUT1Q12520 339 aa0.56□□□□□ -2.32
SHE4YOR035C RPS22BQ3E7Y3 130 aaKnown RBP0.56□□□□□ -2.32
SHE4YOR035C DDP1Q99321 188 aaKnown RBP0.56□□□□□ -2.32
SHE4YOR035C YGL014C-AP0C5N1 53 aa0.56□□□□□ -2.32
SHE4YOR035C CSN9Q03981 162 aa0.56□□□□□ -2.32
SHE4YOR035C SPC2Q04969 178 aa0.56□□□□□ -2.32
SHE4YOR035C YLR361C-AQ3E795 98 aa0.56□□□□□ -2.32
SHE4YOR035C YLL066W-BQ8TGJ7 56 aa0.56□□□□□ -2.32
SHE4YOR035C RGI1P40043 161 aaPredicted RBP0.55□□□□□ -2.32
SHE4YOR035C VMA10P48836 114 aaKnown RBP0.55□□□□□ -2.32
SHE4YOR035C YGR039WP53225 103 aa0.55□□□□□ -2.32
SHE4YOR035C YGR042WP53227 271 aa0.55□□□□□ -2.32
SHE4YOR035C HHO1P53551 258 aa0.55□□□□□ -2.32
SHE4YOR035C RTC6O14464 93 aa0.55□□□□□ -2.32
SHE4YOR035C HPM1P40481 377 aa0.55□□□□□ -2.32
SHE4YOR035C TOM7P53507 60 aa0.55□□□□□ -2.32
SHE4YOR035C RPL14AP36105 138 aaKnown RBP0.54□□□□□ -2.32
SHE4YOR035C POP7P38291 140 aa0.54□□□□□ -2.32
SHE4YOR035C RPL14BP38754 138 aaKnown RBP0.54□□□□□ -2.32
SHE4YOR035C YNL019CP53975 284 aa0.54□□□□□ -2.32
SHE4YOR035C YMR122CQ03879 124 aa0.54□□□□□ -2.32
SHE4YOR035C YOR289WQ12012 251 aaPredicted RBP0.54□□□□□ -2.32
SHE4YOR035C FUN14P18411 198 aa0.54□□□□□ -2.32
SHE4YOR035C MRPL38P35996 138 aaPredicted RBP0.54□□□□□ -2.32
SHE4YOR035C QCR10P37299 77 aa0.54□□□□□ -2.32
SHE4YOR035C LST8P41318 303 aa0.54□□□□□ -2.32
SHE4YOR035C RPS11AP0CX47 156 aaKnown RBP0.53□□□□□ -2.32
SHE4YOR035C RPS11BP0CX48 156 aaKnown RBP0.53□□□□□ -2.32
SHE4YOR035C YCR050CP25630 102 aa0.53□□□□□ -2.32
SHE4YOR035C AIM4P38305 123 aaPredicted RBP0.53□□□□□ -2.32
SHE4YOR035C YAL064WP39711 94 aa0.53□□□□□ -2.32
SHE4YOR035C LSM8P47093 109 aaKnown RBP0.53□□□□□ -2.32
SHE4YOR035C SPG1P50088 95 aa0.53□□□□□ -2.32
SHE4YOR035C BRP1P53194 125 aa0.53□□□□□ -2.32
SHE4YOR035C SFT2P38166 215 aa0.53□□□□□ -2.33
SHE4YOR035C MPC1P53157 130 aaKnown RBP0.53□□□□□ -2.33
SHE4YOR035C COA4Q05809 96 aa0.53□□□□□ -2.33
SHE4YOR035C YHR213WP0CI67 198 aa0.52□□□□□ -2.33
SHE4YOR035C RPS20P38701 121 aaKnown RBP0.52□□□□□ -2.33
SHE4YOR035C NAT5Q08689 176 aa0.52□□□□□ -2.33
SHE4YOR035C YCR075W-AQ3E830 75 aa0.52□□□□□ -2.33
SHE4YOR035C YMR141CP40211 102 aa0.52□□□□□ -2.33
SHE4YOR035C SFT1P43682 97 aa0.52□□□□□ -2.33
SHE4YOR035C TVP18Q04767 167 aa0.52□□□□□ -2.33
SHE4YOR035C YOL131WQ08270 108 aa0.52□□□□□ -2.33
SHE4YOR035C YNL277W-AQ3E7Z0 62 aa0.52□□□□□ -2.33
SHE4YOR035C LHP1P33399 275 aaKnown RBP0.51□□□□□ -2.33
Retrieved 100 of 5,963 RNA–protein pairs in 22.6 ms