RNA–Protein interactions for RNA: YMR183C

SSO2, Transcript of Plasma membrane t-SNARE, yeastyeast

Gene SSO2, Length 888 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSO2YMR183C FLO9P39712 1322 aa2.37□□□□□ -2.03
SSO2YMR183C LYS2P07702 1392 aa2.36□□□□□ -2.03
SSO2YMR183C FUN14P18411 198 aa2.36□□□□□ -2.03
SSO2YMR183C IGO1P53897 168 aa2.36□□□□□ -2.03
SSO2YMR183C TOR2P32600 2474 aaKnown RBP2.36□□□□□ -2.03
SSO2YMR183C YER187WP40102 141 aa2.35□□□□□ -2.03
SSO2YMR183C PEP8P40335 379 aa2.35□□□□□ -2.03
SSO2YMR183C YPL067CQ02754 198 aa2.35□□□□□ -2.03
SSO2YMR183C FIT1Q04433 528 aa2.35□□□□□ -2.03
SSO2YMR183C SWC7Q06707 132 aa2.35□□□□□ -2.03
SSO2YMR183C HKR1P41809 1802 aa2.35□□□□□ -2.03
SSO2YMR183C GSC2P40989 1895 aa2.35□□□□□ -2.03
SSO2YMR183C RTC6O14464 93 aa2.34□□□□□ -2.03
SSO2YMR183C UBC4P15731 148 aa2.34□□□□□ -2.03
SSO2YMR183C MRPL11P36521 249 aaPredicted RBP2.34□□□□□ -2.03
SSO2YMR183C YFL051CP43552 160 aa2.34□□□□□ -2.03
SSO2YMR183C DAN1P47178 298 aa2.34□□□□□ -2.03
SSO2YMR183C YHR130CP38834 111 aa2.33□□□□□ -2.04
SSO2YMR183C HUR1P45820 110 aa2.33□□□□□ -2.04
SSO2YMR183C HRT1Q08273 121 aa2.33□□□□□ -2.04
SSO2YMR183C YPL261CQ08976 102 aa2.33□□□□□ -2.04
SSO2YMR183C YCR075W-AQ3E830 75 aa2.33□□□□□ -2.04
SSO2YMR183C YOS1Q3E834 85 aa2.33□□□□□ -2.04
SSO2YMR183C RPL40AP0CH08 128 aaKnown RBP2.32□□□□□ -2.04
SSO2YMR183C RPL40BP0CH09 128 aaKnown RBP2.32□□□□□ -2.04
SSO2YMR183C FPR1P20081 114 aaKnown RBP2.32□□□□□ -2.04
SSO2YMR183C VMA21P41806 77 aa2.32□□□□□ -2.04
SSO2YMR183C MLP1Q02455 1875 aaKnown RBP2.32□□□□□ -2.04
SSO2YMR183C YJL197C-AP0C5P0 93 aa2.31□□□□□ -2.04
SSO2YMR183C GTT1P40582 234 aa2.31□□□□□ -2.04
SSO2YMR183C YLR296WQ05898 108 aa2.31□□□□□ -2.04
SSO2YMR183C DAD1Q12248 94 aa2.31□□□□□ -2.04
SSO2YMR183C KSH1Q8TGJ3 72 aa2.31□□□□□ -2.04
SSO2YMR183C OST5Q92316 86 aa2.31□□□□□ -2.04
SSO2YMR183C MIC10Q96VH5 97 aa2.31□□□□□ -2.04
SSO2YMR183C YBR242WP38331 238 aa2.3□□□□□ -2.04
SSO2YMR183C RGM1Q00453 211 aa2.3□□□□□ -2.04
SSO2YMR183C MIX14Q04341 121 aa2.3□□□□□ -2.04
SSO2YMR183C COA6Q3E846 104 aa2.3□□□□□ -2.04
SSO2YMR183C YGL010WP25338 174 aa2.29□□□□□ -2.04
SSO2YMR183C YBR219CP38317 127 aa2.29□□□□□ -2.04
SSO2YMR183C PAU12P53343 120 aa2.29□□□□□ -2.04
SSO2YMR183C YHR086W-AQ3E746 53 aa2.29□□□□□ -2.04
SSO2YMR183C YDR034W-BQ6Q5X2 51 aa2.29□□□□□ -2.04
SSO2YMR183C TAR1Q8TGM6 124 aa2.29□□□□□ -2.04
SSO2YMR183C RPL36BO14455 100 aaKnown RBP2.28□□□□□ -2.04
SSO2YMR183C RPL36AP05745 100 aaPredicted RBP2.28□□□□□ -2.04
SSO2YMR183C PRE1P22141 198 aaKnown RBP2.28□□□□□ -2.04
SSO2YMR183C YGL194C-AQ2V2P6 80 aa2.28□□□□□ -2.04
SSO2YMR183C MHF1Q3E835 90 aa2.28□□□□□ -2.04
SSO2YMR183C FAS1P07149 2051 aaKnown RBP2.28□□□□□ -2.04
SSO2YMR183C YHR213WP0CI67 198 aa2.27□□□□□ -2.05
SSO2YMR183C SNU13P39990 126 aaKnown RBP2.27□□□□□ -2.05
SSO2YMR183C YEL008WP40001 126 aa2.27□□□□□ -2.05
SSO2YMR183C NHP10Q03435 203 aa2.27□□□□□ -2.05
SSO2YMR183C VAM10Q08474 114 aa2.27□□□□□ -2.05
SSO2YMR183C PCC1Q3E833 88 aa2.27□□□□□ -2.05
SSO2YMR183C FLO1P32768 1537 aa2.27□□□□□ -2.05
SSO2YMR183C QCR8P08525 94 aa2.26□□□□□ -2.05
SSO2YMR183C NRG2P38082 220 aa2.26□□□□□ -2.05
SSO2YMR183C YIR020CP40575 100 aa2.26□□□□□ -2.05
SSO2YMR183C RPL22BP56628 122 aaKnown RBP2.26□□□□□ -2.05
SSO2YMR183C SED1Q01589 338 aa2.26□□□□□ -2.05
SSO2YMR183C YIL014C-AQ02598 104 aa2.26□□□□□ -2.05
SSO2YMR183C YLR194CQ05777 254 aa2.26□□□□□ -2.05
SSO2YMR183C YLR162WQ06235 118 aa2.26□□□□□ -2.05
SSO2YMR183C SCP1Q08873 200 aa2.26□□□□□ -2.05
SSO2YMR183C YKL068W-AQ3E826 78 aa2.26□□□□□ -2.05
SSO2YMR183C YGL014C-AP0C5N1 53 aa2.25□□□□□ -2.05
SSO2YMR183C PAU2P32612 120 aa2.25□□□□□ -2.05
SSO2YMR183C YBR027CP38220 110 aa2.25□□□□□ -2.05
SSO2YMR183C SNN1P48232 102 aa2.25□□□□□ -2.05
SSO2YMR183C HPA2Q06592 156 aa2.25□□□□□ -2.05
SSO2YMR183C FIT3Q08907 204 aa2.25□□□□□ -2.05
SSO2YMR183C YDR029WQ12111 104 aa2.25□□□□□ -2.05
SSO2YMR183C IRA2P19158 3079 aa2.25□□□□□ -2.05
SSO2YMR183C RPL33AP05744 107 aaKnown RBP2.24□□□□□ -2.05
SSO2YMR183C YCL042WP25572 119 aa2.24□□□□□ -2.05
SSO2YMR183C SRX1P36077 127 aa2.24□□□□□ -2.05
SSO2YMR183C PAU24P38155 120 aa2.24□□□□□ -2.05
SSO2YMR183C ATG8P38182 117 aaRIP-Chip data2.24□□□□□ -2.05not detected
SSO2YMR183C EMC5P40540 141 aa2.24□□□□□ -2.05
SSO2YMR183C MSL1P40567 111 aaPredicted RBP2.24□□□□□ -2.05
SSO2YMR183C YNL146C-AQ3E7Z1 64 aa2.24□□□□□ -2.05
SSO2YMR183C PFY1P07274 126 aa2.23□□□□□ -2.05
SSO2YMR183C LST8P41318 303 aa2.23□□□□□ -2.05
SSO2YMR183C PAU19P0CE85 124 aa2.22□□□□□ -2.05
SSO2YMR183C PAU3P25610 124 aa2.22□□□□□ -2.05
SSO2YMR183C RSM19P53733 91 aaPredicted RBP2.22□□□□□ -2.05
SSO2YMR183C COA3Q3E7B2 85 aa2.22□□□□□ -2.05
SSO2YMR183C COX23P38824 151 aa2.21□□□□□ -2.06
SSO2YMR183C RPL13BP40212 199 aaKnown RBP2.21□□□□□ -2.06
SSO2YMR183C POR2P40478 281 aa2.21□□□□□ -2.06
SSO2YMR183C YMR122CQ03879 124 aa2.21□□□□□ -2.06
SSO2YMR183C YMR082CQ04276 118 aa2.21□□□□□ -2.06
SSO2YMR183C FMP27Q06179 2628 aa2.21□□□□□ -2.06
SSO2YMR183C SEN1Q00416 2231 aaKnown RBP2.2□□□□□ -2.06
SSO2YMR183C HMRA1P0CY11 126 aa2.19□□□□□ -2.06
SSO2YMR183C PAU16P35994 123 aa2.19□□□□□ -2.06
SSO2YMR183C YHR138CP38841 114 aaPredicted RBP2.19□□□□□ -2.06
Retrieved 100 of 5,963 RNA–protein pairs in 49.5 ms