RNA–Protein interactions for RNA: YMR016C

SOK2, Transcript of Nuclear protein that negatively regulates pseudohyphal differentiation, yeastyeast

Gene SOK2, Length 2,358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SOK2YMR016C KSH1Q8TGJ3 72 aa1.25□□□□□ -2.21
SOK2YMR016C BPH1P25356 2167 aa1.25□□□□□ -2.21
SOK2YMR016C YLR236CA0A023PZG4 107 aa1.25□□□□□ -2.21
SOK2YMR016C YCR099CP25657 155 aa1.25□□□□□ -2.21
SOK2YMR016C YKR045CP36138 183 aa1.25□□□□□ -2.21
SOK2YMR016C MRPL11P36521 249 aaPredicted RBP1.25□□□□□ -2.21
SOK2YMR016C YEL067CP39978 195 aa1.25□□□□□ -2.21
SOK2YMR016C HPA3P39979 161 aa1.25□□□□□ -2.21
SOK2YMR016C GTT1P40582 234 aa1.25□□□□□ -2.21
SOK2YMR016C ERV14P53173 138 aa1.25□□□□□ -2.21
SOK2YMR016C RSM19P53733 91 aaPredicted RBP1.25□□□□□ -2.21
SOK2YMR016C YHP1Q04116 353 aa1.25□□□□□ -2.21
SOK2YMR016C UIP4Q08926 304 aa1.25□□□□□ -2.21
SOK2YMR016C YLR365WQ7LIF2 110 aa1.25□□□□□ -2.21
SOK2YMR016C SLH1P53327 1967 aaKnown RBP1.24□□□□□ -2.21
SOK2YMR016C YHL018WP38744 120 aaPredicted RBP1.24□□□□□ -2.21
SOK2YMR016C YGL149WP53116 101 aa1.24□□□□□ -2.21
SOK2YMR016C YIL014C-AQ02598 104 aa1.24□□□□□ -2.21
SOK2YMR016C FIT3Q08907 204 aa1.24□□□□□ -2.21
SOK2YMR016C ATG40Q99325 256 aa1.24□□□□□ -2.21
SOK2YMR016C FPR1P20081 114 aaKnown RBP1.23□□□□□ -2.21
SOK2YMR016C EMC5P40540 141 aa1.23□□□□□ -2.21
SOK2YMR016C DAD4P69851 72 aa1.23□□□□□ -2.21
SOK2YMR016C HFA1P32874 2273 aa1.23□□□□□ -2.21
SOK2YMR016C RTC6O14464 93 aa1.23□□□□□ -2.21
SOK2YMR016C MDM35O60200 86 aa1.23□□□□□ -2.21
SOK2YMR016C YHR022CP38763 256 aa1.23□□□□□ -2.21
SOK2YMR016C SPG1P50088 95 aa1.23□□□□□ -2.21
SOK2YMR016C POP3P53833 195 aaPredicted RBP1.23□□□□□ -2.21
SOK2YMR016C CYT2Q00873 224 aa1.23□□□□□ -2.21
SOK2YMR016C YMR090WQ04304 227 aaKnown RBP1.23□□□□□ -2.21
SOK2YMR016C SWC7Q06707 132 aa1.23□□□□□ -2.21
SOK2YMR016C YPR013CQ12145 317 aa1.23□□□□□ -2.21
SOK2YMR016C STT4P37297 1900 aa1.23□□□□□ -2.21
SOK2YMR016C UBC4P15731 148 aa1.22□□□□□ -2.21
SOK2YMR016C ECM31P38122 312 aa1.22□□□□□ -2.21
SOK2YMR016C YGR269WP40326 108 aa1.22□□□□□ -2.21
SOK2YMR016C MSL1P40567 111 aaPredicted RBP1.22□□□□□ -2.21
SOK2YMR016C RPL33BP41056 107 aaKnown RBP1.22□□□□□ -2.21
SOK2YMR016C CWP2P43497 92 aa1.22□□□□□ -2.21
SOK2YMR016C YFL051CP43552 160 aa1.22□□□□□ -2.21
SOK2YMR016C CIS3P47001 227 aa1.22□□□□□ -2.21
SOK2YMR016C UPS3Q04006 179 aa1.22□□□□□ -2.21
SOK2YMR016C ELP6Q04868 273 aa1.22□□□□□ -2.21
SOK2YMR016C YOS1Q3E834 85 aa1.22□□□□□ -2.21
SOK2YMR016C COX8P04039 78 aa1.22□□□□□ -2.21
SOK2YMR016C PAU19P0CE85 124 aa1.22□□□□□ -2.21
SOK2YMR016C SEC11P15367 167 aa1.22□□□□□ -2.21
SOK2YMR016C FUN14P18411 198 aa1.22□□□□□ -2.21
SOK2YMR016C PAU3P25610 124 aa1.22□□□□□ -2.21
SOK2YMR016C LSM2P38203 95 aaKnown RBP1.22□□□□□ -2.21
SOK2YMR016C COA4Q05809 96 aa1.22□□□□□ -2.21
SOK2YMR016C RAF1Q06891 181 aa1.22□□□□□ -2.21
SOK2YMR016C FIT2Q08906 153 aa1.22□□□□□ -2.21
SOK2YMR016C SVP26P38869 228 aa1.21□□□□□ -2.22
SOK2YMR016C RPL13BP40212 199 aaKnown RBP1.21□□□□□ -2.22
SOK2YMR016C PEP8P40335 379 aa1.21□□□□□ -2.22
SOK2YMR016C DCV1P43595 202 aa1.21□□□□□ -2.22
SOK2YMR016C YGR164WP53291 111 aa1.21□□□□□ -2.22
SOK2YMR016C PIR1Q03178 341 aa1.21□□□□□ -2.22
SOK2YMR016C YMR082CQ04276 118 aa1.21□□□□□ -2.22
SOK2YMR016C YLR296WQ05898 108 aa1.21□□□□□ -2.22
SOK2YMR016C NMA1Q06178 401 aaKnown RBP1.21□□□□□ -2.22
SOK2YMR016C PAU21P0CE86 164 aa1.21□□□□□ -2.22
SOK2YMR016C PAU22P0CE87 164 aa1.21□□□□□ -2.22
SOK2YMR016C YER187WP40102 141 aa1.21□□□□□ -2.22
SOK2YMR016C YPL067CQ02754 198 aa1.21□□□□□ -2.22
SOK2YMR016C FIT1Q04433 528 aa1.21□□□□□ -2.22
SOK2YMR016C AVO2Q04749 426 aa1.21□□□□□ -2.22
SOK2YMR016C YLR194CQ05777 254 aa1.21□□□□□ -2.22
SOK2YMR016C YPL261CQ08976 102 aa1.21□□□□□ -2.22
SOK2YMR016C ECM12O13529 151 aa1.2□□□□□ -2.22
SOK2YMR016C SRB6P32570 121 aa1.2□□□□□ -2.22
SOK2YMR016C ATG8P38182 117 aaRIP-Chip data1.2□□□□□ -2.22not detected
SOK2YMR016C HSP10P38910 106 aa1.2□□□□□ -2.22
SOK2YMR016C IPT1P38954 527 aa1.2□□□□□ -2.22
SOK2YMR016C YML079WQ03629 201 aa1.2□□□□□ -2.22
SOK2YMR016C PCC1Q3E833 88 aa1.2□□□□□ -2.22
SOK2YMR016C POL2P21951 2222 aaKnown RBP1.2□□□□□ -2.22
SOK2YMR016C COX23P38824 151 aa1.2□□□□□ -2.22
SOK2YMR016C BRP1P53194 125 aa1.2□□□□□ -2.22
SOK2YMR016C SML1Q04964 104 aa1.2□□□□□ -2.22
SOK2YMR016C COA6Q3E846 104 aa1.2□□□□□ -2.22
SOK2YMR016C PAU16P35994 123 aa1.19□□□□□ -2.22
SOK2YMR016C HYR1P40581 163 aaKnown RBP1.19□□□□□ -2.22
SOK2YMR016C PAU15P40585 124 aa1.19□□□□□ -2.22
SOK2YMR016C PAU5P43575 122 aa1.19□□□□□ -2.22
SOK2YMR016C ATP19P81451 68 aa1.19□□□□□ -2.22
SOK2YMR016C DAD1Q12248 94 aa1.19□□□□□ -2.22
SOK2YMR016C RPS22AP0C0W1 130 aaKnown RBP1.19□□□□□ -2.22
SOK2YMR016C HMRA2P0CY13 119 aa1.19□□□□□ -2.22
SOK2YMR016C HSP150P32478 413 aa1.19□□□□□ -2.22
SOK2YMR016C CUE4Q04201 117 aaPredicted RBP1.19□□□□□ -2.22
SOK2YMR016C YLR162WQ06235 118 aa1.19□□□□□ -2.22
SOK2YMR016C IRA2P19158 3079 aa1.18□□□□□ -2.22
SOK2YMR016C STF2P16965 84 aa1.18□□□□□ -2.22
SOK2YMR016C SRX1P36077 127 aa1.18□□□□□ -2.22
SOK2YMR016C YBR209WP38311 105 aa1.18□□□□□ -2.22
SOK2YMR016C DSE2P38844 325 aa1.18□□□□□ -2.22
SOK2YMR016C CYB5P40312 120 aa1.18□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 27 ms