RNA–Protein interactions for RNA: YLR440C

SEC39, Transcript of Component of the Dsl1p tethering complex, yeast

Gene SEC39, Length 2,130 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SEC39	YLR440C	YDR274C	P87283	123 aa		3.95	□□□□□ -1.78
SEC39	YLR440C	RPL21A	Q02753	160 aa	Known RBP	3.95	□□□□□ -1.78
SEC39	YLR440C	RPL21B	Q12672	160 aa	Known RBP	3.95	□□□□□ -1.78
SEC39	YLR440C	PBA1	Q05778	276 aa		3.94	□□□□□ -1.78
SEC39	YLR440C	FYV5	P25585	152 aa		3.94	□□□□□ -1.78
SEC39	YLR440C	FPR2	P32472	135 aa		3.94	□□□□□ -1.78
SEC39	YLR440C	RPL23A	P0CX41	137 aa	Known RBP	3.93	□□□□□ -1.78
SEC39	YLR440C	RPL23B	P0CX42	137 aa	Known RBP	3.93	□□□□□ -1.78
SEC39	YLR440C	NCA3	P46955	337 aa		3.93	□□□□□ -1.78
SEC39	YLR440C	PAU12	P53343	120 aa		3.93	□□□□□ -1.78
SEC39	YLR440C	RPL26A	P05743	127 aa	Known RBP	3.92	□□□□□ -1.78
SEC39	YLR440C	PAU1	P0CE88	120 aa		3.92	□□□□□ -1.78
SEC39	YLR440C	PAU14	P0CE89	120 aa		3.92	□□□□□ -1.78
SEC39	YLR440C	PAU6	P0CE90	120 aa		3.92	□□□□□ -1.78
SEC39	YLR440C	PAU18	P0CE91	120 aa		3.92	□□□□□ -1.78
SEC39	YLR440C	PAU8	P0CE92	120 aa		3.92	□□□□□ -1.78
SEC39	YLR440C	PAU11	P0CE93	120 aa		3.92	□□□□□ -1.78
SEC39	YLR440C	YHR214C-D	P0CX93	97 aa		3.92	□□□□□ -1.78
SEC39	YLR440C	TIM12	P32830	109 aa		3.92	□□□□□ -1.78
SEC39	YLR440C	PAU13	P38725	120 aa		3.92	□□□□□ -1.78
SEC39	YLR440C	YHL005C	P38752	130 aa		3.92	□□□□□ -1.78
SEC39	YLR440C	PAU10	Q03050	120 aa		3.92	□□□□□ -1.78
SEC39	YLR440C	PAU20	Q08322	120 aa		3.92	□□□□□ -1.78
SEC39	YLR440C	PAU9	Q3E770	120 aa		3.92	□□□□□ -1.78
SEC39	YLR440C	YOR020W-A	Q3E824	90 aa		3.92	□□□□□ -1.78
SEC39	YLR440C	PAU4	P53427	120 aa		3.92	□□□□□ -1.78
SEC39	YLR440C	FYV12	Q08559	129 aa		3.92	□□□□□ -1.78
SEC39	YLR440C	CRC1	Q12289	327 aa		3.92	□□□□□ -1.78
SEC39	YLR440C	YAR023C	D6VPM8	179 aa		3.91	□□□□□ -1.78
SEC39	YLR440C	RPL42A	P0CX27	106 aa	Known RBP	3.91	□□□□□ -1.78
SEC39	YLR440C	RPL42B	P0CX28	106 aa	Known RBP	3.91	□□□□□ -1.78
SEC39	YLR440C	ATP15	P21306	62 aa		3.91	□□□□□ -1.78
SEC39	YLR440C	YHR180W	P38868	163 aa		3.91	□□□□□ -1.78
SEC39	YLR440C	URM1	P40554	99 aa	Predicted RBP	3.91	□□□□□ -1.78
SEC39	YLR440C	IGO1	P53897	168 aa		3.91	□□□□□ -1.78
SEC39	YLR440C	MET31	Q03081	177 aa		3.91	□□□□□ -1.78
SEC39	YLR440C	MIM1	Q08176	113 aa		3.91	□□□□□ -1.78
SEC39	YLR440C	YPR011C	Q12251	326 aa		3.91	□□□□□ -1.78
SEC39	YLR440C	RPS22B	Q3E7Y3	130 aa	Known RBP	3.91	□□□□□ -1.78
SEC39	YLR440C	YBL059W	P34224	193 aa		3.91	□□□□□ -1.78
SEC39	YLR440C	ASK1	P35734	292 aa		3.91	□□□□□ -1.78
SEC39	YLR440C	QCR10	P37299	77 aa		3.91	□□□□□ -1.78
SEC39	YLR440C	PAU24	P38155	120 aa		3.91	□□□□□ -1.78
SEC39	YLR440C	YSY6	P38374	65 aa		3.91	□□□□□ -1.78
SEC39	YLR440C	YGL118C	P53132	145 aa		3.91	□□□□□ -1.78
SEC39	YLR440C	MIX17	Q03667	156 aa		3.91	□□□□□ -1.78
SEC39	YLR440C	PCL9	Q12477	304 aa		3.91	□□□□□ -1.78
SEC39	YLR440C	SOD1	P00445	154 aa	Known RBP	3.9	□□□□□ -1.79
SEC39	YLR440C	AIM26	P32858	118 aa		3.9	□□□□□ -1.79
SEC39	YLR440C	FLO5	P38894	1075 aa		3.9	□□□□□ -1.79
SEC39	YLR440C	ATP19	P81451	68 aa		3.9	□□□□□ -1.79
SEC39	YLR440C	LIP1	Q03579	150 aa		3.9	□□□□□ -1.79
SEC39	YLR440C	FSH2	Q05015	223 aa		3.9	□□□□□ -1.79
SEC39	YLR440C	HHF1	P02309	103 aa	Known RBP	3.89	□□□□□ -1.79
SEC39	YLR440C	ROX3	P25046	220 aa		3.89	□□□□□ -1.79
SEC39	YLR440C	YCR025C	P25352	136 aa		3.89	□□□□□ -1.79
SEC39	YLR440C	YCR043C	P25361	127 aa		3.89	□□□□□ -1.79
SEC39	YLR440C	LST8	P41318	303 aa		3.89	□□□□□ -1.79
SEC39	YLR440C	IMP2	P46972	177 aa		3.89	□□□□□ -1.79
SEC39	YLR440C	BRP1	P53194	125 aa		3.89	□□□□□ -1.79
SEC39	YLR440C	EMI1	Q04406	187 aa		3.89	□□□□□ -1.79
SEC39	YLR440C	YPL261C	Q08976	102 aa		3.89	□□□□□ -1.79
SEC39	YLR440C	IRA1	P18963	3092 aa		3.89	□□□□□ -1.79
SEC39	YLR440C	YLR156W	P0CE96	114 aa		3.89	□□□□□ -1.79
SEC39	YLR440C	YLR159W	P0CE97	114 aa		3.89	□□□□□ -1.79
SEC39	YLR440C	YLR161W	P0CE98	114 aa		3.89	□□□□□ -1.79
SEC39	YLR440C	YOL118C	Q08259	102 aa		3.89	□□□□□ -1.79
SEC39	YLR440C	YPL278C	Q08990	100 aa		3.89	□□□□□ -1.79
SEC39	YLR440C	ATP20	Q12233	115 aa		3.89	□□□□□ -1.79
SEC39	YLR440C	YOR343C	Q12484	108 aa		3.89	□□□□□ -1.79
SEC39	YLR440C	YIL046W-A	Q3E7Z4	54 aa		3.89	□□□□□ -1.79
SEC39	YLR440C	STT4	P37297	1900 aa		3.88	□□□□□ -1.79
SEC39	YLR440C	MTC6	P38849	526 aa		3.88	□□□□□ -1.79
SEC39	YLR440C	MRPS8	Q03799	155 aa		3.88	□□□□□ -1.79
SEC39	YLR440C	YOR381W-A	Q3E804	55 aa		3.88	□□□□□ -1.79
SEC39	YLR440C	YER145C-A	A0A023PYF4	145 aa		3.88	□□□□□ -1.79
SEC39	YLR440C	AGA1	P32323	725 aa		3.88	□□□□□ -1.79
SEC39	YLR440C	YEL073C	P39974	107 aa		3.88	□□□□□ -1.79
SEC39	YLR440C	YFL015C	P43578	164 aa		3.88	□□□□□ -1.79
SEC39	YLR440C	TRS23	Q03784	219 aa		3.88	□□□□□ -1.79
SEC39	YLR440C	IRC23	Q08416	157 aa		3.88	□□□□□ -1.79
SEC39	YLR440C	PPT2	Q12036	173 aa		3.88	□□□□□ -1.79
SEC39	YLR440C	YHR173C	P38864	112 aa		3.87	□□□□□ -1.79
SEC39	YLR440C	YIL014C-A	Q02598	104 aa		3.87	□□□□□ -1.79
SEC39	YLR440C	MET32	Q12041	191 aa		3.87	□□□□□ -1.79
SEC39	YLR440C	TIM22	Q12328	207 aa		3.87	□□□□□ -1.79
SEC39	YLR440C	PFY1	P07274	126 aa		3.86	□□□□□ -1.79
SEC39	YLR440C	YFL012W	P43580	148 aa		3.86	□□□□□ -1.79
SEC39	YLR440C	SOM1	Q05676	74 aa		3.86	□□□□□ -1.79
SEC39	YLR440C	YOR314W	Q12506	109 aa		3.86	□□□□□ -1.79
SEC39	YLR440C	YAL065C	O13511	128 aa		3.86	□□□□□ -1.79
SEC39	YLR440C	MSA2	P36157	363 aa		3.86	□□□□□ -1.79
SEC39	YLR440C	POL2	P21951	2222 aa	Known RBP	3.86	□□□□□ -1.79
SEC39	YLR440C	PIS1	P06197	220 aa	Known RBP	3.85	□□□□□ -1.79
SEC39	YLR440C	ERG2	P32352	222 aa		3.85	□□□□□ -1.79
SEC39	YLR440C	DSE2	P38844	325 aa		3.85	□□□□□ -1.79
SEC39	YLR440C	MPC3	P53311	146 aa		3.85	□□□□□ -1.79
SEC39	YLR440C	VPS68	Q12016	184 aa		3.85	□□□□□ -1.79
SEC39	YLR440C	RPS22A	P0C0W1	130 aa	Known RBP	3.85	□□□□□ -1.79
SEC39	YLR440C	PTH1	P38876	190 aa	Known RBP	3.85	□□□□□ -1.79

Retrieved 100 of 5,963 RNA–protein pairs in 62.8 ms