RNA–Protein interactions for RNA: YLR335W

NUP2, Transcript of Nucleoporin involved in nucleocytoplasmic transport, yeastyeast

Gene NUP2, Length 2,163 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP2YLR335W RPA12P32529 125 aaKnown RBP3.46□□□□□ -1.86
NUP2YLR335W YER085CP40058 173 aa3.46□□□□□ -1.86
NUP2YLR335W YBR200W-AQ3E755 54 aa3.46□□□□□ -1.86
NUP2YLR335W YNL146C-AQ3E7Z1 64 aa3.46□□□□□ -1.86
NUP2YLR335W Q0255P03881 472 aa3.45□□□□□ -1.86
NUP2YLR335W QCR8P08525 94 aa3.45□□□□□ -1.86
NUP2YLR335W FIP1P45976 327 aa3.45□□□□□ -1.86
NUP2YLR335W YJR146WP47174 117 aa3.45□□□□□ -1.86
NUP2YLR335W YNL184CP53876 108 aa3.45□□□□□ -1.86
NUP2YLR335W COX12Q01519 83 aa3.45□□□□□ -1.86
NUP2YLR335W YPR053CQ6Q5F3 151 aa3.45□□□□□ -1.86
NUP2YLR335W SEN1Q00416 2231 aaKnown RBP3.45□□□□□ -1.86
NUP2YLR335W ATP15P21306 62 aa3.44□□□□□ -1.86
NUP2YLR335W UGX2P32772 223 aa3.44□□□□□ -1.86
NUP2YLR335W YHR130CP38834 111 aa3.44□□□□□ -1.86
NUP2YLR335W YPL278CQ08990 100 aa3.44□□□□□ -1.86
NUP2YLR335W YFL041W-AQ3E817 63 aa3.44□□□□□ -1.86
NUP2YLR335W VTC1P40046 129 aaRIP-Chip data3.44□□□□□ -1.86not detected
NUP2YLR335W MRPS12P53732 153 aa3.44□□□□□ -1.86
NUP2YLR335W EOS1P53938 366 aa3.44□□□□□ -1.86
NUP2YLR335W SPO24Q3E752 67 aa3.44□□□□□ -1.86
NUP2YLR335W IRA1P18963 3092 aa3.43□□□□□ -1.86
NUP2YLR335W RAD6P06104 172 aa3.43□□□□□ -1.86
NUP2YLR335W VHS2P40463 436 aa3.43□□□□□ -1.86
NUP2YLR335W YCH1P42937 148 aa3.43□□□□□ -1.86
NUP2YLR335W YAL063C-AQ3E791 96 aa3.43□□□□□ -1.86
NUP2YLR335W RPL16AP26784 199 aaKnown RBP3.42□□□□□ -1.86
NUP2YLR335W INO2P26798 304 aa3.42□□□□□ -1.86
NUP2YLR335W NRG2P38082 220 aa3.42□□□□□ -1.86
NUP2YLR335W SHU1P38751 150 aa3.42□□□□□ -1.86
NUP2YLR335W RPL28P02406 149 aaKnown RBP3.42□□□□□ -1.86
NUP2YLR335W RPL18AP0CX49 186 aaKnown RBP3.42□□□□□ -1.86
NUP2YLR335W RPL18BP0CX50 186 aaKnown RBP3.42□□□□□ -1.86
NUP2YLR335W YIA6P40556 373 aa3.42□□□□□ -1.86
NUP2YLR335W SKI6P46948 246 aaPredicted RBP3.42□□□□□ -1.86
NUP2YLR335W YML122CQ03207 126 aa3.42□□□□□ -1.86
NUP2YLR335W PRM7Q12459 698 aa3.42□□□□□ -1.86
NUP2YLR335W RPL16BP26785 198 aaKnown RBP3.41□□□□□ -1.86
NUP2YLR335W YIR020CP40575 100 aa3.41□□□□□ -1.86
NUP2YLR335W WWM1P43582 211 aaKnown RBP3.41□□□□□ -1.86
NUP2YLR335W ABF2Q02486 183 aa3.41□□□□□ -1.86
NUP2YLR335W YIR021W-AQ3E739 70 aa3.41□□□□□ -1.86
NUP2YLR335W YAR029WP39549 74 aa3.41□□□□□ -1.86
NUP2YLR335W HFA1P32874 2273 aa3.4□□□□□ -1.87
NUP2YLR335W SIM1P40472 476 aa3.4□□□□□ -1.87
NUP2YLR335W VPS55P47111 140 aa3.4□□□□□ -1.87
NUP2YLR335W YGL260WP53056 76 aa3.4□□□□□ -1.87
NUP2YLR335W YPL080CQ02826 108 aa3.4□□□□□ -1.87
NUP2YLR335W YLR042CQ07990 161 aa3.4□□□□□ -1.87
NUP2YLR335W YOR011W-AQ3E807 68 aa3.4□□□□□ -1.87
NUP2YLR335W RPL11AP0C0W9 174 aaKnown RBP3.39□□□□□ -1.87
NUP2YLR335W DSE2P38844 325 aa3.39□□□□□ -1.87
NUP2YLR335W YER135CP40082 130 aa3.39□□□□□ -1.87
NUP2YLR335W YDL186WP48568 277 aa3.39□□□□□ -1.87
NUP2YLR335W TOS8P53147 276 aa3.39□□□□□ -1.87
NUP2YLR335W YGR025WP53216 100 aa3.39□□□□□ -1.87
NUP2YLR335W PPT2Q12036 173 aa3.39□□□□□ -1.87
NUP2YLR335W RPL11BQ3E757 174 aaPredicted RBP3.39□□□□□ -1.87
NUP2YLR335W YOR020W-AQ3E824 90 aa3.39□□□□□ -1.87
NUP2YLR335W YOL085CQ99345 113 aa3.39□□□□□ -1.87
NUP2YLR335W AIM19P40502 157 aa3.39□□□□□ -1.87
NUP2YLR335W HUR1P45820 110 aa3.39□□□□□ -1.87
NUP2YLR335W SPG4Q04438 115 aa3.39□□□□□ -1.87
NUP2YLR335W YMR317WQ04893 1140 aa3.39□□□□□ -1.87
NUP2YLR335W HOR7Q05827 59 aa3.39□□□□□ -1.87
NUP2YLR335W YCL021W-AQ96VH3 125 aa3.39□□□□□ -1.87
NUP2YLR335W MRPL24P36525 258 aaPredicted RBP3.38□□□□□ -1.87
NUP2YLR335W YEL008WP40001 126 aa3.38□□□□□ -1.87
NUP2YLR335W PMP3P87284 55 aa3.38□□□□□ -1.87
NUP2YLR335W YPR013CQ12145 317 aa3.38□□□□□ -1.87
NUP2YLR335W YHR139C-AO13536 103 aa3.38□□□□□ -1.87
NUP2YLR335W SPS100P13130 326 aa3.38□□□□□ -1.87
NUP2YLR335W VMA11P32842 164 aa3.38□□□□□ -1.87
NUP2YLR335W TIM10P87108 93 aa3.38□□□□□ -1.87
NUP2YLR335W MRPS8Q03799 155 aa3.38□□□□□ -1.87
NUP2YLR335W YMR244WQ04018 355 aa3.38□□□□□ -1.87
NUP2YLR335W SHH4Q06236 168 aa3.38□□□□□ -1.87
NUP2YLR335W YDR381C-AQ3E6R5 114 aa3.38□□□□□ -1.87
NUP2YLR335W IRA2P19158 3079 aa3.37□□□□□ -1.87
NUP2YLR335W PBI2P0CT04 75 aaKnown RBP3.37□□□□□ -1.87
NUP2YLR335W MID2P36027 376 aa3.37□□□□□ -1.87
NUP2YLR335W MSA2P36157 363 aa3.37□□□□□ -1.87
NUP2YLR335W RRT13P40042 185 aa3.37□□□□□ -1.87
NUP2YLR335W YNL190WP53872 204 aa3.37□□□□□ -1.87
NUP2YLR335W RGM1Q00453 211 aa3.37□□□□□ -1.87
NUP2YLR335W ENV10Q99382 181 aa3.37□□□□□ -1.87
NUP2YLR335W YBR209WP38311 105 aa3.36□□□□□ -1.87
NUP2YLR335W YHL042WP38729 150 aa3.36□□□□□ -1.87
NUP2YLR335W MPC2P38857 129 aa3.36□□□□□ -1.87
NUP2YLR335W SVP26P38869 228 aa3.36□□□□□ -1.87
NUP2YLR335W MIG3P39943 394 aa3.36□□□□□ -1.87
NUP2YLR335W UBC5P15732 148 aa3.36□□□□□ -1.87
NUP2YLR335W COF1Q03048 143 aaKnown RBP3.36□□□□□ -1.87
NUP2YLR335W PBA1Q05778 276 aa3.36□□□□□ -1.87
NUP2YLR335W CSF1Q12150 2958 aa3.36□□□□□ -1.87
NUP2YLR335W YBR126W-AQ8TGU7 68 aa3.36□□□□□ -1.87
NUP2YLR335W RPL15AP05748 204 aaKnown RBP3.35□□□□□ -1.87
NUP2YLR335W RPR2P40571 144 aa3.35□□□□□ -1.87
NUP2YLR335W CWP2P43497 92 aa3.35□□□□□ -1.87
NUP2YLR335W YGR039WP53225 103 aa3.35□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 37.8 ms