RNA–Protein interactions for RNA: YKL112W

ABF1, Transcript of DNA binding protein with possible chromatin-reorganizing activity, yeastyeast

Gene ABF1, Length 2,196 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ABF1YKL112W YPL038W-AQ3E7B4 63 aa3.66□□□□□ -1.82
ABF1YKL112W RPL23AP0CX41 137 aaKnown RBP3.65□□□□□ -1.82
ABF1YKL112W RPL23BP0CX42 137 aaKnown RBP3.65□□□□□ -1.82
ABF1YKL112W SEC11P15367 167 aa3.65□□□□□ -1.82
ABF1YKL112W RPS27AP35997 82 aaKnown RBP3.65□□□□□ -1.82
ABF1YKL112W UMP1P38293 148 aa3.65□□□□□ -1.82
ABF1YKL112W RPS27BP38711 82 aa3.65□□□□□ -1.82
ABF1YKL112W VTC1P40046 129 aaRIP-Chip data3.65□□□□□ -1.82not detected
ABF1YKL112W PCL9Q12477 304 aa3.65□□□□□ -1.82
ABF1YKL112W YMR181CQ03231 154 aa3.65□□□□□ -1.83
ABF1YKL112W YML079WQ03629 201 aa3.65□□□□□ -1.83
ABF1YKL112W YOR268CQ08734 132 aa3.65□□□□□ -1.83
ABF1YKL112W YPR011CQ12251 326 aa3.65□□□□□ -1.83
ABF1YKL112W YCR024C-BQ3E7Z8 88 aa3.65□□□□□ -1.83
ABF1YKL112W MTC6P38849 526 aa3.64□□□□□ -1.83
ABF1YKL112W HUR1P45820 110 aa3.64□□□□□ -1.83
ABF1YKL112W BOL2P53082 120 aa3.64□□□□□ -1.83
ABF1YKL112W COX12Q01519 83 aa3.64□□□□□ -1.83
ABF1YKL112W ICY1Q04329 127 aa3.64□□□□□ -1.83
ABF1YKL112W YDR381C-AQ3E6R5 114 aa3.64□□□□□ -1.83
ABF1YKL112W IMP1P28627 190 aa3.63□□□□□ -1.83
ABF1YKL112W SCS22Q6Q595 175 aa3.63□□□□□ -1.83
ABF1YKL112W YAR068WP39564 161 aa3.63□□□□□ -1.83
ABF1YKL112W HPA2Q06592 156 aa3.63□□□□□ -1.83
ABF1YKL112W ATP15P21306 62 aa3.62□□□□□ -1.83
ABF1YKL112W AGA1P32323 725 aa3.62□□□□□ -1.83
ABF1YKL112W HSP10P38910 106 aa3.62□□□□□ -1.83
ABF1YKL112W YOR105WQ08504 108 aa3.62□□□□□ -1.83
ABF1YKL112W PIS1P06197 220 aaKnown RBP3.62□□□□□ -1.83
ABF1YKL112W ICS3P47034 131 aa3.62□□□□□ -1.83
ABF1YKL112W AYT1Q12226 474 aa3.62□□□□□ -1.83
ABF1YKL112W RSM18P40033 138 aa3.61□□□□□ -1.83
ABF1YKL112W FYV5P25585 152 aa3.61□□□□□ -1.83
ABF1YKL112W YGL262WP53054 175 aa3.61□□□□□ -1.83
ABF1YKL112W LSM6Q06406 86 aaKnown RBP3.61□□□□□ -1.83
ABF1YKL112W COX19Q3E731 98 aa3.61□□□□□ -1.83
ABF1YKL112W YLR156WP0CE96 114 aa3.6□□□□□ -1.83
ABF1YKL112W YLR159WP0CE97 114 aa3.6□□□□□ -1.83
ABF1YKL112W YLR161WP0CE98 114 aa3.6□□□□□ -1.83
ABF1YKL112W PAU2P32612 120 aa3.6□□□□□ -1.83
ABF1YKL112W FZF1P32805 299 aa3.6□□□□□ -1.83
ABF1YKL112W MSA2P36157 363 aa3.6□□□□□ -1.83
ABF1YKL112W COX14P39103 70 aa3.6□□□□□ -1.83
ABF1YKL112W IGO1P53897 168 aa3.6□□□□□ -1.83
ABF1YKL112W YDR274CP87283 123 aa3.6□□□□□ -1.83
ABF1YKL112W YMR295CQ03559 197 aa3.6□□□□□ -1.83
ABF1YKL112W Q0297Q9ZZV8 51 aa3.6□□□□□ -1.83
ABF1YKL112W YHP1Q04116 353 aa3.59□□□□□ -1.83
ABF1YKL112W FLO9P39712 1322 aa3.59□□□□□ -1.83
ABF1YKL112W YAR023CD6VPM8 179 aa3.59□□□□□ -1.84
ABF1YKL112W MRPL31P14063 131 aaPredicted RBP3.59□□□□□ -1.84
ABF1YKL112W QCR10P37299 77 aa3.59□□□□□ -1.84
ABF1YKL112W LST8P41318 303 aa3.59□□□□□ -1.84
ABF1YKL112W NCA3P46955 337 aa3.59□□□□□ -1.84
ABF1YKL112W YOR015WQ12169 119 aa3.59□□□□□ -1.84
ABF1YKL112W ATP20Q12233 115 aa3.59□□□□□ -1.84
ABF1YKL112W YOR020W-AQ3E824 90 aa3.59□□□□□ -1.84
ABF1YKL112W TIM12P32830 109 aa3.58□□□□□ -1.84
ABF1YKL112W YER187WP40102 141 aa3.58□□□□□ -1.84
ABF1YKL112W ECO1P43605 281 aa3.58□□□□□ -1.84
ABF1YKL112W VPS55P47111 140 aa3.58□□□□□ -1.84
ABF1YKL112W PAU12P53343 120 aa3.58□□□□□ -1.84
ABF1YKL112W RPL22BP56628 122 aaKnown RBP3.58□□□□□ -1.84
ABF1YKL112W SMT3Q12306 101 aaKnown RBP3.58□□□□□ -1.84
ABF1YKL112W TIM22Q12328 207 aa3.58□□□□□ -1.84
ABF1YKL112W TVP15Q03860 143 aa3.57□□□□□ -1.84
ABF1YKL112W PBA1Q05778 276 aa3.57□□□□□ -1.84
ABF1YKL112W YKL023C-AQ2V2P3 75 aa3.57□□□□□ -1.84
ABF1YKL112W HHF1P02309 103 aaKnown RBP3.56□□□□□ -1.84
ABF1YKL112W SDH3P33421 198 aa3.56□□□□□ -1.84
ABF1YKL112W YPL247CQ12523 523 aa3.56□□□□□ -1.84
ABF1YKL112W RPL21AQ02753 160 aaKnown RBP3.56□□□□□ -1.84
ABF1YKL112W RPL21BQ12672 160 aaKnown RBP3.56□□□□□ -1.84
ABF1YKL112W RPL26AP05743 127 aaKnown RBP3.55□□□□□ -1.84
ABF1YKL112W PAU24P38155 120 aa3.55□□□□□ -1.84
ABF1YKL112W LIP1Q03579 150 aa3.55□□□□□ -1.84
ABF1YKL112W CRC1Q12289 327 aa3.55□□□□□ -1.84
ABF1YKL112W YHR214C-DP0CX93 97 aa3.55□□□□□ -1.84
ABF1YKL112W ERG2P32352 222 aa3.55□□□□□ -1.84
ABF1YKL112W ASK1P35734 292 aa3.55□□□□□ -1.84
ABF1YKL112W YHL005CP38752 130 aa3.55□□□□□ -1.84
ABF1YKL112W IMP2P46972 177 aa3.55□□□□□ -1.84
ABF1YKL112W SOM1Q05676 74 aa3.55□□□□□ -1.84
ABF1YKL112W FPR2P32472 135 aa3.54□□□□□ -1.84
ABF1YKL112W FSH2Q05015 223 aa3.54□□□□□ -1.84
ABF1YKL112W SRL1Q08673 210 aa3.54□□□□□ -1.84
ABF1YKL112W YPL261CQ08976 102 aa3.54□□□□□ -1.84
ABF1YKL112W YHL037CP38733 133 aa3.53□□□□□ -1.84
ABF1YKL112W TIM9O74700 87 aa3.53□□□□□ -1.84
ABF1YKL112W RPL42AP0CX27 106 aaKnown RBP3.53□□□□□ -1.84
ABF1YKL112W RPL42BP0CX28 106 aaKnown RBP3.53□□□□□ -1.84
ABF1YKL112W RRT1P38192 103 aa3.53□□□□□ -1.84
ABF1YKL112W YHR180WP38868 163 aa3.53□□□□□ -1.84
ABF1YKL112W SOD1P00445 154 aaKnown RBP3.52□□□□□ -1.85
ABF1YKL112W MPC3P53311 146 aa3.52□□□□□ -1.85
ABF1YKL112W MET31Q03081 177 aa3.52□□□□□ -1.85
ABF1YKL112W MRPS8Q03799 155 aa3.52□□□□□ -1.85
ABF1YKL112W CCW14O13547 238 aa3.52□□□□□ -1.85
ABF1YKL112W YCR043CP25361 127 aa3.52□□□□□ -1.85
ABF1YKL112W CTR2P38865 189 aa3.52□□□□□ -1.85
Retrieved 100 of 5,963 RNA–protein pairs in 44 ms