RNA–Protein interactions for RNA: YIR040C

YIR040C, Transcript of Dubious open reading frame, yeastyeast

Gene YIR040C, Length 333 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YIR040CYIR040C YLR146W-AQ2V2P1 62 aa2.53□□□□□ -2
YIR040CYIR040C PAU9Q3E770 120 aa2.53□□□□□ -2
YIR040CYIR040C COA3Q3E7B2 85 aa2.53□□□□□ -2
YIR040CYIR040C RRT15Q3E811 62 aa2.53□□□□□ -2
YIR040CYIR040C BUD3P25558 1636 aa2.53□□□□□ -2
YIR040CYIR040C IML1P47170 1584 aa2.53□□□□□ -2.01
YIR040CYIR040C YAL065CO13511 128 aa2.52□□□□□ -2.01
YIR040CYIR040C MDM35O60200 86 aa2.52□□□□□ -2.01
YIR040CYIR040C HHF1P02309 103 aaKnown RBP2.52□□□□□ -2.01
YIR040CYIR040C RPL26AP05743 127 aaKnown RBP2.52□□□□□ -2.01
YIR040CYIR040C YLR156WP0CE96 114 aa2.52□□□□□ -2.01
YIR040CYIR040C YLR159WP0CE97 114 aa2.52□□□□□ -2.01
YIR040CYIR040C YLR161WP0CE98 114 aa2.52□□□□□ -2.01
YIR040CYIR040C YHR214C-DP0CX93 97 aa2.52□□□□□ -2.01
YIR040CYIR040C PAU2P32612 120 aa2.52□□□□□ -2.01
YIR040CYIR040C YEL073CP39974 107 aa2.52□□□□□ -2.01
YIR040CYIR040C AIM19P40502 157 aa2.52□□□□□ -2.01
YIR040CYIR040C YDR274CP87283 123 aa2.52□□□□□ -2.01
YIR040CYIR040C TIM22Q12328 207 aa2.52□□□□□ -2.01
YIR040CYIR040C YOR314WQ12506 109 aa2.52□□□□□ -2.01
YIR040CYIR040C UTH1P36135 365 aa2.51□□□□□ -2.01
YIR040CYIR040C MSA2P36157 363 aa2.51□□□□□ -2.01
YIR040CYIR040C CTR2P38865 189 aa2.51□□□□□ -2.01
YIR040CYIR040C SPI1P40092 148 aa2.51□□□□□ -2.01
YIR040CYIR040C ECO1P43605 281 aa2.51□□□□□ -2.01
YIR040CYIR040C CIS3P47001 227 aa2.51□□□□□ -2.01
YIR040CYIR040C PAU12P53343 120 aa2.51□□□□□ -2.01
YIR040CYIR040C YMR254CQ04838 102 aa2.51□□□□□ -2.01
YIR040CYIR040C FSH2Q05015 223 aa2.51□□□□□ -2.01
YIR040CYIR040C AYT1Q12226 474 aa2.51□□□□□ -2.01
YIR040CYIR040C RPS22AP0C0W1 130 aaKnown RBP2.5□□□□□ -2.01
YIR040CYIR040C ATP15P21306 62 aa2.5□□□□□ -2.01
YIR040CYIR040C FPR2P32472 135 aa2.5□□□□□ -2.01
YIR040CYIR040C YBL059WP34224 193 aa2.5□□□□□ -2.01
YIR040CYIR040C PAU24P38155 120 aa2.5□□□□□ -2.01
YIR040CYIR040C YBR209WP38311 105 aa2.5□□□□□ -2.01
YIR040CYIR040C TVP23P38962 199 aa2.5□□□□□ -2.01
YIR040CYIR040C ARC15P40518 154 aaRIP-Chip data2.5□□□□□ -2.01not detected
YIR040CYIR040C PIR3Q03180 325 aa2.5□□□□□ -2.01
YIR040CYIR040C MIX17Q03667 156 aa2.5□□□□□ -2.01
YIR040CYIR040C PPT2Q12036 173 aa2.5□□□□□ -2.01
YIR040CYIR040C ATP20Q12233 115 aa2.5□□□□□ -2.01
YIR040CYIR040C SOD1P00445 154 aaKnown RBP2.49□□□□□ -2.01
YIR040CYIR040C SDH3P33421 198 aa2.49□□□□□ -2.01
YIR040CYIR040C RRT1P38192 103 aa2.49□□□□□ -2.01
YIR040CYIR040C IMP2P46972 177 aa2.49□□□□□ -2.01
YIR040CYIR040C VPS55P47111 140 aa2.49□□□□□ -2.01
YIR040CYIR040C MPC3P53311 146 aa2.49□□□□□ -2.01
YIR040CYIR040C SOM1Q05676 74 aa2.49□□□□□ -2.01
YIR040CYIR040C IRC23Q08416 157 aa2.49□□□□□ -2.01
YIR040CYIR040C FYV12Q08559 129 aa2.49□□□□□ -2.01
YIR040CYIR040C BSC1Q12140 328 aa2.49□□□□□ -2.01
YIR040CYIR040C YMR230W-AQ3E7B5 62 aa2.49□□□□□ -2.01
YIR040CYIR040C OST5Q92316 86 aa2.49□□□□□ -2.01
YIR040CYIR040C YBT1P32386 1661 aa2.49□□□□□ -2.01
YIR040CYIR040C MLP1Q02455 1875 aaKnown RBP2.49□□□□□ -2.01
YIR040CYIR040C NUP188P52593 1655 aaKnown RBP2.48□□□□□ -2.01
YIR040CYIR040C CCH1P50077 2039 aa2.48□□□□□ -2.01
YIR040CYIR040C TY4B-JP47024 1803 aa2.48□□□□□ -2.01
YIR040CYIR040C TIM9O74700 87 aa2.48□□□□□ -2.01
YIR040CYIR040C PFY1P07274 126 aa2.48□□□□□ -2.01
YIR040CYIR040C YHR173CP38864 112 aa2.48□□□□□ -2.01
YIR040CYIR040C YGL260WP53056 76 aa2.48□□□□□ -2.01
YIR040CYIR040C BRP1P53194 125 aa2.48□□□□□ -2.01
YIR040CYIR040C IRC19Q07843 230 aa2.48□□□□□ -2.01
YIR040CYIR040C MIM1Q08176 113 aa2.48□□□□□ -2.01
YIR040CYIR040C YPL247CQ12523 523 aa2.48□□□□□ -2.01
YIR040CYIR040C YOR381W-AQ3E804 55 aa2.48□□□□□ -2.01
YIR040CYIR040C UBR1P19812 1950 aa2.48□□□□□ -2.01
YIR040CYIR040C MYO1P08964 1928 aa2.48□□□□□ -2.01
YIR040CYIR040C AIM4P38305 123 aaPredicted RBP2.47□□□□□ -2.01
YIR040CYIR040C YNL208WP40159 199 aaKnown RBP2.47□□□□□ -2.01
YIR040CYIR040C RGM1Q00453 211 aa2.47□□□□□ -2.01
YIR040CYIR040C YOR268CQ08734 132 aa2.47□□□□□ -2.01
YIR040CYIR040C PRM7Q12459 698 aa2.47□□□□□ -2.01
YIR040CYIR040C ECM29P38737 1868 aa2.47□□□□□ -2.01
YIR040CYIR040C QCR9P22289 66 aa2.46□□□□□ -2.02
YIR040CYIR040C YCR025CP25352 136 aa2.46□□□□□ -2.02
YIR040CYIR040C TIM12P32830 109 aa2.46□□□□□ -2.02
YIR040CYIR040C YHL037CP38733 133 aa2.46□□□□□ -2.02
YIR040CYIR040C YLR162WQ06235 118 aa2.46□□□□□ -2.02
YIR040CYIR040C URB1P34241 1764 aaKnown RBP2.46□□□□□ -2.02
YIR040CYIR040C RPL36BO14455 100 aaKnown RBP2.45□□□□□ -2.02
YIR040CYIR040C RPL36AP05745 100 aaPredicted RBP2.45□□□□□ -2.02
YIR040CYIR040C COX9P07255 59 aa2.45□□□□□ -2.02
YIR040CYIR040C YER188C-AP0C0V2 99 aa2.45□□□□□ -2.02
YIR040CYIR040C MRPL27P36526 146 aaPredicted RBP2.45□□□□□ -2.02
YIR040CYIR040C CRH1P53301 507 aa2.45□□□□□ -2.02
YIR040CYIR040C YIL014C-AQ02598 104 aa2.45□□□□□ -2.02
YIR040CYIR040C YMR030W-AQ3E760 96 aa2.45□□□□□ -2.02
YIR040CYIR040C YDR182W-AQ3E796 67 aa2.45□□□□□ -2.02
YIR040CYIR040C YRF1-1P0CX20 1796 aa2.44□□□□□ -2.02
YIR040CYIR040C YRF1-5P0CX21 1796 aa2.44□□□□□ -2.02
YIR040CYIR040C YRF1-8P0CX22 1796 aa2.44□□□□□ -2.02
YIR040CYIR040C DCV1P43595 202 aa2.44□□□□□ -2.02
YIR040CYIR040C GIS2P53849 153 aaKnown RBP RIP-Chip data2.44□□□□□ -2.02not detected
YIR040CYIR040C RIM15P43565 1770 aa2.44□□□□□ -2.02
YIR040CYIR040C YJL197C-AP0C5P0 93 aa2.43□□□□□ -2.02
YIR040CYIR040C YHR022CP38763 256 aa2.43□□□□□ -2.02
YIR040CYIR040C PTH1P38876 190 aaKnown RBP2.43□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 43.1 ms