RNA–Protein interactions for RNA: YIL118W

RHO3, Transcript of Non-essential small GTPase of the Rho/Rac family of Ras-like proteins, yeast

Gene RHO3, Length 696 nt, Biotype protein coding, Subcellular localisation Cellular bud .

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RHO3	YIL118W	LSM6	Q06406	86 aa	Known RBP	4.17	□□□□□ -1.74
RHO3	YIL118W	AYT1	Q12226	474 aa		4.17	□□□□□ -1.74
RHO3	YIL118W	HHF1	P02309	103 aa	Known RBP	4.16	□□□□□ -1.74
RHO3	YIL118W	PIS1	P06197	220 aa	Known RBP	4.16	□□□□□ -1.74
RHO3	YIL118W	ERG2	P32352	222 aa		4.16	□□□□□ -1.74
RHO3	YIL118W	YHL005C	P38752	130 aa		4.16	□□□□□ -1.74
RHO3	YIL118W	COX14	P39103	70 aa		4.16	□□□□□ -1.74
RHO3	YIL118W	PAU12	P53343	120 aa		4.16	□□□□□ -1.74
RHO3	YIL118W	IGO1	P53897	168 aa		4.16	□□□□□ -1.74
RHO3	YIL118W	RPL21A	Q02753	160 aa	Known RBP	4.16	□□□□□ -1.74
RHO3	YIL118W	LIP1	Q03579	150 aa		4.16	□□□□□ -1.74
RHO3	YIL118W	PBA1	Q05778	276 aa		4.16	□□□□□ -1.74
RHO3	YIL118W	ATP20	Q12233	115 aa		4.16	□□□□□ -1.74
RHO3	YIL118W	SMT3	Q12306	101 aa	Known RBP	4.16	□□□□□ -1.74
RHO3	YIL118W	RPL21B	Q12672	160 aa	Known RBP	4.16	□□□□□ -1.74
RHO3	YIL118W	SLH1	P53327	1967 aa	Known RBP	4.15	□□□□□ -1.74
RHO3	YIL118W	YHR214C-D	P0CX93	97 aa		4.15	□□□□□ -1.75
RHO3	YIL118W	HSP10	P38910	106 aa		4.15	□□□□□ -1.75
RHO3	YIL118W	PIR1	Q03178	341 aa		4.15	□□□□□ -1.75
RHO3	YIL118W	CIS3	P47001	227 aa		4.14	□□□□□ -1.75
RHO3	YIL118W	MRPS8	Q03799	155 aa		4.14	□□□□□ -1.75
RHO3	YIL118W	RPL26A	P05743	127 aa	Known RBP	4.13	□□□□□ -1.75
RHO3	YIL118W	MRPL31	P14063	131 aa	Predicted RBP	4.13	□□□□□ -1.75
RHO3	YIL118W	PAU24	P38155	120 aa		4.13	□□□□□ -1.75
RHO3	YIL118W	TVP23	P38962	199 aa		4.13	□□□□□ -1.75
RHO3	YIL118W	SOM1	Q05676	74 aa		4.13	□□□□□ -1.75
RHO3	YIL118W	YHR180W	P38868	163 aa		4.12	□□□□□ -1.75
RHO3	YIL118W	YEL073C	P39974	107 aa		4.12	□□□□□ -1.75
RHO3	YIL118W	IMP2	P46972	177 aa		4.12	□□□□□ -1.75
RHO3	YIL118W	VPS55	P47111	140 aa		4.12	□□□□□ -1.75
RHO3	YIL118W	MET31	Q03081	177 aa		4.12	□□□□□ -1.75
RHO3	YIL118W	TVP15	Q03860	143 aa		4.12	□□□□□ -1.75
RHO3	YIL118W	YPL261C	Q08976	102 aa		4.12	□□□□□ -1.75
RHO3	YIL118W	TIM12	P32830	109 aa		4.11	□□□□□ -1.75
RHO3	YIL118W	RRT1	P38192	103 aa		4.11	□□□□□ -1.75
RHO3	YIL118W	ARC15	P40518	154 aa	RIP-Chip data	4.11	□□□□□ -1.75	not detected
RHO3	YIL118W	ATP19	P81451	68 aa		4.11	□□□□□ -1.75
RHO3	YIL118W	FSH2	Q05015	223 aa		4.11	□□□□□ -1.75
RHO3	YIL118W	TIM9	O74700	87 aa		4.1	□□□□□ -1.75
RHO3	YIL118W	LST8	P41318	303 aa		4.1	□□□□□ -1.75
RHO3	YIL118W	YOL118C	Q08259	102 aa		4.1	□□□□□ -1.75
RHO3	YIL118W	YOR343C	Q12484	108 aa		4.1	□□□□□ -1.75
RHO3	YIL118W	MHF2	Q3E829	80 aa		4.1	□□□□□ -1.75
RHO3	YIL118W	CTR2	P38865	189 aa		4.09	□□□□□ -1.75
RHO3	YIL118W	GIS2	P53849	153 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.75	not detected
RHO3	YIL118W	IRC23	Q08416	157 aa		4.09	□□□□□ -1.75
RHO3	YIL118W	YOR381W-A	Q3E804	55 aa		4.09	□□□□□ -1.75
RHO3	YIL118W	SOD1	P00445	154 aa	Known RBP	4.08	□□□□□ -1.76
RHO3	YIL118W	FPR2	P32472	135 aa		4.08	□□□□□ -1.76
RHO3	YIL118W	MPC3	P53311	146 aa		4.08	□□□□□ -1.76
RHO3	YIL118W	RGM1	Q00453	211 aa		4.08	□□□□□ -1.76
RHO3	YIL118W	IRC19	Q07843	230 aa		4.08	□□□□□ -1.76
RHO3	YIL118W	BSC1	Q12140	328 aa		4.08	□□□□□ -1.76
RHO3	YIL118W	YPL247C	Q12523	523 aa		4.08	□□□□□ -1.76
RHO3	YIL118W	ECO1	P43605	281 aa		4.07	□□□□□ -1.76
RHO3	YIL118W	OST5	Q92316	86 aa		4.07	□□□□□ -1.76
RHO3	YIL118W	SDH3	P33421	198 aa		4.06	□□□□□ -1.76
RHO3	YIL118W	YHR173C	P38864	112 aa		4.06	□□□□□ -1.76
RHO3	YIL118W	YMR230W-A	Q3E7B5	62 aa		4.06	□□□□□ -1.76
RHO3	YIL118W	YAL065C	O13511	128 aa		4.05	□□□□□ -1.76
RHO3	YIL118W	ROX3	P25046	220 aa		4.05	□□□□□ -1.76
RHO3	YIL118W	UTH1	P36135	365 aa		4.05	□□□□□ -1.76
RHO3	YIL118W	YSY6	P38374	65 aa		4.05	□□□□□ -1.76
RHO3	YIL118W	BRP1	P53194	125 aa		4.05	□□□□□ -1.76
RHO3	YIL118W	TMC1	Q08422	150 aa	Predicted RBP	4.05	□□□□□ -1.76
RHO3	YIL118W	PPT2	Q12036	173 aa		4.05	□□□□□ -1.76
RHO3	YIL118W	YOR314W	Q12506	109 aa		4.05	□□□□□ -1.76
RHO3	YIL118W	CYR1	P08678	2026 aa	Known RBP	4.05	□□□□□ -1.76
RHO3	YIL118W	FLO9	P39712	1322 aa		4.04	□□□□□ -1.76
RHO3	YIL118W	PFY1	P07274	126 aa		4.04	□□□□□ -1.76
RHO3	YIL118W	PIR3	Q03180	325 aa		4.04	□□□□□ -1.76
RHO3	YIL118W	MIX17	Q03667	156 aa		4.04	□□□□□ -1.76
RHO3	YIL118W	YOL029C	Q08187	201 aa		4.04	□□□□□ -1.76
RHO3	YIL118W	PTH1	P38876	190 aa	Known RBP	4.03	□□□□□ -1.76
RHO3	YIL118W	YDL241W	Q07738	123 aa		4.03	□□□□□ -1.76
RHO3	YIL118W	YDR246W-A	Q3E763	66 aa		4.03	□□□□□ -1.76
RHO3	YIL118W	YGR121W-A	Q3E816	71 aa		4.03	□□□□□ -1.76
RHO3	YIL118W	NUP192	P47054	1683 aa		4.03	□□□□□ -1.76
RHO3	YIL118W	YCR022C	P25620	114 aa		4.02	□□□□□ -1.77
RHO3	YIL118W	SPI1	P40092	148 aa		4.02	□□□□□ -1.77
RHO3	YIL118W	YIR020C	P40575	100 aa		4.02	□□□□□ -1.77
RHO3	YIL118W	RPS22A	P0C0W1	130 aa	Known RBP	4.01	□□□□□ -1.77
RHO3	YIL118W	YBL059W	P34224	193 aa		4.01	□□□□□ -1.77
RHO3	YIL118W	RPR2	P40571	144 aa		4.01	□□□□□ -1.77
RHO3	YIL118W	YLR162W	Q06235	118 aa		4.01	□□□□□ -1.77
RHO3	YIL118W	AIM4	P38305	123 aa	Predicted RBP	4	□□□□□ -1.77
RHO3	YIL118W	RPS22B	Q3E7Y3	130 aa	Known RBP	4	□□□□□ -1.77
RHO3	YIL118W	YER188C-A	P0C0V2	99 aa		3.99	□□□□□ -1.77
RHO3	YIL118W	YJL197C-A	P0C5P0	93 aa		3.99	□□□□□ -1.77
RHO3	YIL118W	RPS23A	P0CX29	145 aa	Known RBP	3.99	□□□□□ -1.77
RHO3	YIL118W	RPS23B	P0CX30	145 aa		3.99	□□□□□ -1.77
RHO3	YIL118W	QCR9	P22289	66 aa		3.99	□□□□□ -1.77
RHO3	YIL118W	YGL118C	P53132	145 aa		3.99	□□□□□ -1.77
RHO3	YIL118W	ERI1	P62651	68 aa	Known RBP	3.99	□□□□□ -1.77
RHO3	YIL118W	YKL065W-A	Q2V2P2	73 aa		3.99	□□□□□ -1.77
RHO3	YIL118W	YNL208W	P40159	199 aa	Known RBP	3.98	□□□□□ -1.77
RHO3	YIL118W	DCV1	P43595	202 aa		3.98	□□□□□ -1.77
RHO3	YIL118W	YGL149W	P53116	101 aa		3.98	□□□□□ -1.77
RHO3	YIL118W	SED1	Q01589	338 aa		3.98	□□□□□ -1.77
RHO3	YIL118W	YIL014C-A	Q02598	104 aa		3.98	□□□□□ -1.77

Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms