RNA–Protein interactions for RNA: YDR409W

SIZ1, Transcript of SUMO/Smt3 ligase, yeastyeast

Gene SIZ1, Length 2,715 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SIZ1YDR409W RPL15AP05748 204 aaKnown RBP2.58□□□□□ -2
SIZ1YDR409W MRPL39P36533 70 aa2.58□□□□□ -2
SIZ1YDR409W IMP2P46972 177 aa2.58□□□□□ -2
SIZ1YDR409W SDH7Q04401 133 aa2.58□□□□□ -2
SIZ1YDR409W YMR317WQ04893 1140 aa2.58□□□□□ -2
SIZ1YDR409W HPA2Q06592 156 aa2.58□□□□□ -2
SIZ1YDR409W YLR342W-AQ3E810 57 aa2.58□□□□□ -2
SIZ1YDR409W YDL022C-AP0C5L6 82 aa2.58□□□□□ -2
SIZ1YDR409W MRPL20P22354 195 aaPredicted RBP2.58□□□□□ -2
SIZ1YDR409W CTR2P38865 189 aa2.58□□□□□ -2
SIZ1YDR409W GLE2P40066 365 aa2.58□□□□□ -2
SIZ1YDR409W UBC7Q02159 165 aa2.58□□□□□ -2
SIZ1YDR409W YDR114CQ04597 100 aa2.58□□□□□ -2
SIZ1YDR409W COA3Q3E7B2 85 aa2.58□□□□□ -2
SIZ1YDR409W POL2P21951 2222 aaKnown RBP2.57□□□□□ -2
SIZ1YDR409W RPA12P32529 125 aaKnown RBP2.57□□□□□ -2
SIZ1YDR409W FIP1P45976 327 aa2.57□□□□□ -2
SIZ1YDR409W YGR219WP53307 113 aa2.57□□□□□ -2
SIZ1YDR409W LSM6Q06406 86 aaKnown RBP2.57□□□□□ -2
SIZ1YDR409W YKR045CP36138 183 aa2.57□□□□□ -2
SIZ1YDR409W TOS6P48560 102 aa2.57□□□□□ -2
SIZ1YDR409W RPL16AP26784 199 aaKnown RBP2.56□□□□□ -2
SIZ1YDR409W MOH1P38191 138 aa2.56□□□□□ -2
SIZ1YDR409W YHR140WP38842 239 aa2.56□□□□□ -2
SIZ1YDR409W SPI1P40092 148 aa2.56□□□□□ -2
SIZ1YDR409W YNL217WP40152 326 aa2.56□□□□□ -2
SIZ1YDR409W PIR5P46999 287 aa2.56□□□□□ -2
SIZ1YDR409W YPL261CQ08976 102 aa2.56□□□□□ -2
SIZ1YDR409W YFR032C-BQ8TGU2 87 aa2.56□□□□□ -2
SIZ1YDR409W YOL085CQ99345 113 aa2.56□□□□□ -2
SIZ1YDR409W INO2P26798 304 aa2.56□□□□□ -2
SIZ1YDR409W RPB9P27999 122 aa2.56□□□□□ -2
SIZ1YDR409W PHO85P17157 305 aa2.55□□□□□ -2
SIZ1YDR409W VTC1P40046 129 aaRIP-Chip data2.55□□□□□ -2 RIP-Chip
SIZ1YDR409W SKI6P46948 246 aaPredicted RBP2.55□□□□□ -2
SIZ1YDR409W SHH4Q06236 168 aa2.55□□□□□ -2
SIZ1YDR409W YOR376W-AQ3E805 51 aa2.55□□□□□ -2
SIZ1YDR409W YFL041W-AQ3E817 63 aa2.55□□□□□ -2
SIZ1YDR409W YMR105W-AQ8TGS8 64 aa2.55□□□□□ -2
SIZ1YDR409W HMRA2P0CY13 119 aa2.55□□□□□ -2
SIZ1YDR409W EDC2P40023 145 aaPredicted RBP2.55□□□□□ -2
SIZ1YDR409W YJL027CP47063 138 aaPredicted RBP2.55□□□□□ -2
SIZ1YDR409W SIP18P50263 79 aa2.55□□□□□ -2
SIZ1YDR409W ECM19Q06011 112 aa2.55□□□□□ -2
SIZ1YDR409W Q0255P03881 472 aa2.55□□□□□ -2
SIZ1YDR409W COX12Q01519 83 aa2.55□□□□□ -2
SIZ1YDR409W YPR053CQ6Q5F3 151 aa2.55□□□□□ -2
SIZ1YDR409W RRT1P38192 103 aa2.54□□□□□ -2
SIZ1YDR409W YLR042CQ07990 161 aa2.54□□□□□ -2
SIZ1YDR409W TRP1P00912 224 aa2.54□□□□□ -2
SIZ1YDR409W YMR244WQ04018 355 aa2.54□□□□□ -2
SIZ1YDR409W YDR119W-AQ2V2P9 66 aa2.54□□□□□ -2
SIZ1YDR409W YER078W-AQ3E7A2 54 aa2.54□□□□□ -2
SIZ1YDR409W ATP15P21306 62 aa2.53□□□□□ -2
SIZ1YDR409W YCR085WP25650 117 aa2.53□□□□□ -2
SIZ1YDR409W HOT13P36078 116 aa2.53□□□□□ -2
SIZ1YDR409W YIA6P40556 373 aa2.53□□□□□ -2
SIZ1YDR409W AIM11P87275 137 aa2.53□□□□□ -2
SIZ1YDR409W YLR194CQ05777 254 aa2.53□□□□□ -2
SIZ1YDR409W MRPS12P53732 153 aa2.53□□□□□ -2
SIZ1YDR409W RPL39P04650 51 aa2.52□□□□□ -2.01
SIZ1YDR409W YGL088WP53151 121 aa2.52□□□□□ -2.01
SIZ1YDR409W YTH1Q06102 208 aaPredicted RBP2.52□□□□□ -2.01
SIZ1YDR409W FCY1Q12178 158 aa2.52□□□□□ -2.01
SIZ1YDR409W VPS13Q07878 3144 aa2.52□□□□□ -2.01
SIZ1YDR409W CCW14O13547 238 aa2.52□□□□□ -2.01
SIZ1YDR409W MID2P36027 376 aa2.52□□□□□ -2.01
SIZ1YDR409W UTH1P36135 365 aa2.52□□□□□ -2.01
SIZ1YDR409W MSA2P36157 363 aa2.52□□□□□ -2.01
SIZ1YDR409W NRG2P38082 220 aa2.52□□□□□ -2.01
SIZ1YDR409W YFL051CP43552 160 aa2.52□□□□□ -2.01
SIZ1YDR409W YFL019CP43576 117 aa2.52□□□□□ -2.01
SIZ1YDR409W COF1Q03048 143 aaKnown RBP2.52□□□□□ -2.01
SIZ1YDR409W ENV10Q99382 181 aa2.52□□□□□ -2.01
SIZ1YDR409W SMP1P38128 452 aa2.51□□□□□ -2.01
SIZ1YDR409W SFT1P43682 97 aa2.51□□□□□ -2.01
SIZ1YDR409W VPS55P47111 140 aa2.51□□□□□ -2.01
SIZ1YDR409W NRM1P53718 249 aa2.51□□□□□ -2.01
SIZ1YDR409W YOR008C-AQ3E7B9 74 aa2.51□□□□□ -2.01
SIZ1YDR409W YCL021W-AQ96VH3 125 aa2.51□□□□□ -2.01
SIZ1YDR409W BEM2P39960 2167 aaKnown RBP2.51□□□□□ -2.01
SIZ1YDR409W RPS23AP0CX29 145 aaKnown RBP2.51□□□□□ -2.01
SIZ1YDR409W RPS23BP0CX30 145 aa2.51□□□□□ -2.01
SIZ1YDR409W MRPL24P36525 258 aaPredicted RBP2.51□□□□□ -2.01
SIZ1YDR409W DSE2P38844 325 aa2.51□□□□□ -2.01
SIZ1YDR409W YDR381C-AQ3E6R5 114 aa2.51□□□□□ -2.01
SIZ1YDR409W YER039C-AP0CD97 72 aa2.5□□□□□ -2.01
SIZ1YDR409W CWP2P43497 92 aa2.5□□□□□ -2.01
SIZ1YDR409W IRC23Q08416 157 aa2.5□□□□□ -2.01
SIZ1YDR409W PRM7Q12459 698 aa2.5□□□□□ -2.01
SIZ1YDR409W RAD6P06104 172 aa2.5□□□□□ -2.01
SIZ1YDR409W VMA11P32842 164 aa2.5□□□□□ -2.01
SIZ1YDR409W YJR146WP47174 117 aa2.5□□□□□ -2.01
SIZ1YDR409W SEN1Q00416 2231 aaKnown RBP2.5□□□□□ -2.01
SIZ1YDR409W MRPL38P35996 138 aaPredicted RBP2.49□□□□□ -2.01
SIZ1YDR409W YGR039WP53225 103 aa2.49□□□□□ -2.01
SIZ1YDR409W FYV12Q08559 129 aa2.49□□□□□ -2.01
SIZ1YDR409W YPL278CQ08990 100 aa2.49□□□□□ -2.01
SIZ1YDR409W YDR034W-BQ6Q5X2 51 aa2.49□□□□□ -2.01
SIZ1YDR409W YHL037CP38733 133 aa2.48□□□□□ -2.01
Retrieved 100 of 5,963 RNA–protein pairs in 37 ms