RNA–Protein interactions for RNA: YDR340W

YDR340W, Transcript of Putative protein of unknown function, yeastyeast

Gene YDR340W, Length 303 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDR340WYDR340W LSM6Q06406 86 aaKnown RBP1.61□□□□□ -2.15
YDR340WYDR340W LAA1P39526 2014 aa1.61□□□□□ -2.15
YDR340WYDR340W BPT1P14772 1559 aa1.6□□□□□ -2.15
YDR340WYDR340W MRPS12P53732 153 aa1.6□□□□□ -2.15
YDR340WYDR340W RSM19P53733 91 aaPredicted RBP1.6□□□□□ -2.15
YDR340WYDR340W HUG1Q6Q5K6 68 aa1.6□□□□□ -2.15
YDR340WYDR340W URB1P34241 1764 aaKnown RBP1.59□□□□□ -2.16
YDR340WYDR340W SEC7P11075 2009 aaKnown RBP1.59□□□□□ -2.16
YDR340WYDR340W SRB6P32570 121 aa1.58□□□□□ -2.16
YDR340WYDR340W HHY1P39982 102 aa1.58□□□□□ -2.16
YDR340WYDR340W MVB12P42939 101 aa1.58□□□□□ -2.16
YDR340WYDR340W CCW14O13547 238 aa1.57□□□□□ -2.16
YDR340WYDR340W YOL118CQ08259 102 aa1.57□□□□□ -2.16
YDR340WYDR340W YCR075W-AQ3E830 75 aa1.57□□□□□ -2.16
YDR340WYDR340W RPA190P10964 1664 aaKnown RBP1.57□□□□□ -2.16
YDR340WYDR340W PDR10P51533 1564 aa1.56□□□□□ -2.16
YDR340WYDR340W YHL005CP38752 130 aa1.56□□□□□ -2.16
YDR340WYDR340W EMC5P40540 141 aa1.56□□□□□ -2.16
YDR340WYDR340W RPL37AP49166 88 aaKnown RBP1.56□□□□□ -2.16
YDR340WYDR340W YHR213W-BQ8TGK1 99 aa1.56□□□□□ -2.16
YDR340WYDR340W RSF2P46974 1380 aa1.56□□□□□ -2.16
YDR340WYDR340W MSL1P40567 111 aaPredicted RBP1.55□□□□□ -2.16
YDR340WYDR340W PAU5P43575 122 aa1.55□□□□□ -2.16
YDR340WYDR340W HMRA1P0CY11 126 aa1.54□□□□□ -2.16
YDR340WYDR340W LCL1Q02786 101 aa1.54□□□□□ -2.16
YDR340WYDR340W RRT15Q3E811 62 aa1.54□□□□□ -2.16
YDR340WYDR340W ROX3P25046 220 aa1.53□□□□□ -2.16
YDR340WYDR340W YDR210WQ03482 75 aa1.53□□□□□ -2.16
YDR340WYDR340W SEC16P48415 2195 aaKnown RBP1.52□□□□□ -2.17
YDR340WYDR340W IMP2P46972 177 aa1.52□□□□□ -2.17
YDR340WYDR340W YDR029WQ12111 104 aa1.52□□□□□ -2.17
YDR340WYDR340W YCR095W-AQ3E787 52 aa1.52□□□□□ -2.17
YDR340WYDR340W YMR141CP40211 102 aa1.51□□□□□ -2.17
YDR340WYDR340W SSN2P38931 1420 aa1.5□□□□□ -2.17
YDR340WYDR340W YJR128WP47162 119 aa1.5□□□□□ -2.17
YDR340WYDR340W BRR2P32639 2163 aaKnown RBP1.49□□□□□ -2.17
YDR340WYDR340W YLR255CO13574 117 aa1.49□□□□□ -2.17
YDR340WYDR340W GCV3P39726 170 aaPredicted RBP1.49□□□□□ -2.17
YDR340WYDR340W YPL038W-AQ3E7B4 63 aa1.49□□□□□ -2.17
YDR340WYDR340W ESC1Q03661 1658 aaKnown RBP1.48□□□□□ -2.17
YDR340WYDR340W NTE1Q04958 1679 aa1.48□□□□□ -2.17
YDR340WYDR340W SNU13P39990 126 aaKnown RBP1.48□□□□□ -2.17
YDR340WYDR340W SNA2P56508 79 aa1.48□□□□□ -2.17
YDR340WYDR340W YDR042CQ03205 200 aa1.48□□□□□ -2.17
YDR340WYDR340W YMR082CQ04276 118 aa1.48□□□□□ -2.17
YDR340WYDR340W RSM18P40033 138 aa1.47□□□□□ -2.17
YDR340WYDR340W COX12Q01519 83 aa1.47□□□□□ -2.17
YDR340WYDR340W YGL194C-AQ2V2P6 80 aa1.47□□□□□ -2.17
YDR340WYDR340W SUS1Q6WNK7 96 aa1.47□□□□□ -2.17
YDR340WYDR340W SRB8P25648 1427 aa1.47□□□□□ -2.17
YDR340WYDR340W YRF1-1P0CX20 1796 aa1.46□□□□□ -2.18
YDR340WYDR340W YRF1-5P0CX21 1796 aa1.46□□□□□ -2.18
YDR340WYDR340W YRF1-8P0CX22 1796 aa1.46□□□□□ -2.18
YDR340WYDR340W URA2P07259 2214 aaKnown RBP1.46□□□□□ -2.18
YDR340WYDR340W ECM12O13529 151 aa1.45□□□□□ -2.18
YDR340WYDR340W PAU6P0CE90 120 aa1.45□□□□□ -2.18
YDR340WYDR340W PAU18P0CE91 120 aa1.45□□□□□ -2.18
YDR340WYDR340W MRPL38P35996 138 aaPredicted RBP1.45□□□□□ -2.18
YDR340WYDR340W SCP1Q08873 200 aa1.45□□□□□ -2.18
YDR340WYDR340W YOR034C-AQ3E735 80 aa1.45□□□□□ -2.18
YDR340WYDR340W LTE1P07866 1435 aa1.45□□□□□ -2.18
YDR340WYDR340W TY4B-HP0C2J7 1802 aa1.45□□□□□ -2.18
YDR340WYDR340W YIL086CP40503 102 aa1.44□□□□□ -2.18
YDR340WYDR340W RPL37BP51402 88 aaKnown RBP1.44□□□□□ -2.18
YDR340WYDR340W COX19Q3E731 98 aa1.44□□□□□ -2.18
YDR340WYDR340W SWR1Q05471 1514 aa1.44□□□□□ -2.18
YDR340WYDR340W MRP17P28778 131 aa1.43□□□□□ -2.18
YDR340WYDR340W YBL071CP38185 102 aa1.43□□□□□ -2.18
YDR340WYDR340W NHP10Q03435 203 aa1.43□□□□□ -2.18
YDR340WYDR340W ICY1Q04329 127 aa1.43□□□□□ -2.18
YDR340WYDR340W GDB1Q06625 1536 aa1.43□□□□□ -2.18
YDR340WYDR340W POL2P21951 2222 aaKnown RBP1.42□□□□□ -2.18
YDR340WYDR340W SHU1P38751 150 aa1.42□□□□□ -2.18
YDR340WYDR340W SPC1P46965 94 aa1.42□□□□□ -2.18
YDR340WYDR340W MRX7P53869 86 aa1.42□□□□□ -2.18
YDR340WYDR340W YSP2Q06681 1438 aa1.41□□□□□ -2.18
YDR340WYDR340W RPL43AP0CX25 92 aaKnown RBP1.41□□□□□ -2.18
YDR340WYDR340W RPL43BP0CX26 92 aa1.41□□□□□ -2.18
YDR340WYDR340W MPC2P38857 129 aa1.41□□□□□ -2.18
YDR340WYDR340W YNR034W-AQ3E841 98 aa1.41□□□□□ -2.18
YDR340WYDR340W AIM19P40502 157 aa1.4□□□□□ -2.19
YDR340WYDR340W POL1P13382 1468 aa1.39□□□□□ -2.19
YDR340WYDR340W RPS11AP0CX47 156 aaKnown RBP1.38□□□□□ -2.19
YDR340WYDR340W RPS11BP0CX48 156 aaKnown RBP1.38□□□□□ -2.19
YDR340WYDR340W YMR175W-AQ3E766 64 aa1.38□□□□□ -2.19
YDR340WYDR340W PAU20Q08322 120 aa1.37□□□□□ -2.19
YDR340WYDR340W MHF2Q3E829 80 aa1.37□□□□□ -2.19
YDR340WYDR340W PAU1P0CE88 120 aa1.36□□□□□ -2.19
YDR340WYDR340W PAU14P0CE89 120 aa1.36□□□□□ -2.19
YDR340WYDR340W PAU8P0CE92 120 aa1.36□□□□□ -2.19
YDR340WYDR340W PAU11P0CE93 120 aa1.36□□□□□ -2.19
YDR340WYDR340W YBR292CP38357 123 aa1.36□□□□□ -2.19
YDR340WYDR340W PAU13P38725 120 aa1.36□□□□□ -2.19
YDR340WYDR340W PAU10Q03050 120 aa1.36□□□□□ -2.19
YDR340WYDR340W PAU9Q3E770 120 aa1.36□□□□□ -2.19
YDR340WYDR340W NHP2P32495 156 aaPredicted RBP1.35□□□□□ -2.19
YDR340WYDR340W PAU4P53427 120 aa1.35□□□□□ -2.19
YDR340WYDR340W YLR307C-AQ3E825 87 aa1.35□□□□□ -2.19
YDR340WYDR340W AUA1P32450 94 aa1.34□□□□□ -2.19
YDR340WYDR340W YBR072C-AQ3E794 53 aa1.34□□□□□ -2.19
Retrieved 100 of 5,963 RNA–protein pairs in 33.2 ms