RNA–Protein interactions for RNA: YDL122W

UBP1, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP1, Length 2,430 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP1YDL122W MEU1Q07938 337 aaKnown RBP RIP-Chip data1.29□□□□□ -2.2not detected
UBP1YDL122W YHR138CP38841 114 aaPredicted RBP1.29□□□□□ -2.2
UBP1YDL122W CUE4Q04201 117 aaPredicted RBP1.29□□□□□ -2.2
UBP1YDL122W ELP6Q04868 273 aa1.29□□□□□ -2.2
UBP1YDL122W BOL1Q3E793 110 aa1.29□□□□□ -2.2
UBP1YDL122W YGL041W-AP0C5N3 154 aa1.28□□□□□ -2.2
UBP1YDL122W BUD25P85052 153 aa1.28□□□□□ -2.2
UBP1YDL122W ANT1Q06497 328 aa1.28□□□□□ -2.2
UBP1YDL122W RRT7Q07829 113 aa1.28□□□□□ -2.2
UBP1YDL122W YOR381W-AQ3E804 55 aa1.28□□□□□ -2.2
UBP1YDL122W SVP26P38869 228 aa1.28□□□□□ -2.2
UBP1YDL122W AIM19P40502 157 aa1.28□□□□□ -2.2
UBP1YDL122W RPS29BP41058 56 aaKnown RBP1.28□□□□□ -2.2
UBP1YDL122W DAD3P69850 94 aa1.28□□□□□ -2.2
UBP1YDL122W EMC6Q12431 108 aa1.28□□□□□ -2.2
UBP1YDL122W YIR021W-AQ3E739 70 aa1.28□□□□□ -2.2
UBP1YDL122W RPL14AP36105 138 aaKnown RBP1.27□□□□□ -2.21
UBP1YDL122W RPL14BP38754 138 aaKnown RBP1.27□□□□□ -2.21
UBP1YDL122W YAE1P47118 141 aaPredicted RBP1.27□□□□□ -2.21
UBP1YDL122W SAY1P53324 424 aa1.27□□□□□ -2.21
UBP1YDL122W APS2Q00381 147 aa1.27□□□□□ -2.21
UBP1YDL122W ARL3Q02804 198 aa1.27□□□□□ -2.21
UBP1YDL122W UPS3Q04006 179 aa1.27□□□□□ -2.21
UBP1YDL122W YOR015WQ12169 119 aa1.27□□□□□ -2.21
UBP1YDL122W RPL33AP05744 107 aaKnown RBP1.27□□□□□ -2.21
UBP1YDL122W BUD23P25627 275 aaPredicted RBP1.27□□□□□ -2.21
UBP1YDL122W GSP2P32836 220 aaKnown RBP1.27□□□□□ -2.21
UBP1YDL122W YHR022CP38763 256 aa1.27□□□□□ -2.21
UBP1YDL122W SFT1P43682 97 aa1.27□□□□□ -2.21
UBP1YDL122W YJL144WP47009 104 aa1.27□□□□□ -2.21
UBP1YDL122W YDR029WQ12111 104 aa1.27□□□□□ -2.21
UBP1YDL122W YLR099W-AQ3E798 87 aa1.27□□□□□ -2.21
UBP1YDL122W YOR304C-AO14468 76 aa1.26□□□□□ -2.21
UBP1YDL122W SEC11P15367 167 aa1.26□□□□□ -2.21
UBP1YDL122W UGX2P32772 223 aa1.26□□□□□ -2.21
UBP1YDL122W SPG1P50088 95 aa1.26□□□□□ -2.21
UBP1YDL122W ERI1P62651 68 aaKnown RBP1.26□□□□□ -2.21
UBP1YDL122W CYT2Q00873 224 aa1.26□□□□□ -2.21
UBP1YDL122W ATG41Q12048 136 aa1.26□□□□□ -2.21
UBP1YDL122W PRM7Q12459 698 aa1.26□□□□□ -2.21
UBP1YDL122W YOR192C-CQ3E736 78 aa1.26□□□□□ -2.21
UBP1YDL122W YBL010CP32788 280 aa1.26□□□□□ -2.21
UBP1YDL122W HPM1P40481 377 aa1.26□□□□□ -2.21
UBP1YDL122W KNH1P50112 268 aa1.26□□□□□ -2.21
UBP1YDL122W RPL37BP51402 88 aaKnown RBP1.26□□□□□ -2.21
UBP1YDL122W AIM11P87275 137 aa1.26□□□□□ -2.21
UBP1YDL122W ELC1Q03071 99 aa1.26□□□□□ -2.21
UBP1YDL122W YML079WQ03629 201 aa1.26□□□□□ -2.21
UBP1YDL122W CCW12Q12127 133 aa1.26□□□□□ -2.21
UBP1YDL122W YLR118CQ12354 227 aa1.26□□□□□ -2.21
UBP1YDL122W COX9P07255 59 aa1.25□□□□□ -2.21
UBP1YDL122W NSE4P43124 402 aa1.25□□□□□ -2.21
UBP1YDL122W POP3P53833 195 aaPredicted RBP1.25□□□□□ -2.21
UBP1YDL122W ATP19P81451 68 aa1.25□□□□□ -2.21
UBP1YDL122W YDL012CQ12489 107 aa1.25□□□□□ -2.21
UBP1YDL122W SPS2P08459 502 aa1.25□□□□□ -2.21
UBP1YDL122W DDI2P0CH63 225 aa1.25□□□□□ -2.21
UBP1YDL122W DDI3P0CH64 225 aa1.25□□□□□ -2.21
UBP1YDL122W YHL018WP38744 120 aaPredicted RBP1.25□□□□□ -2.21
UBP1YDL122W YEL067CP39978 195 aa1.25□□□□□ -2.21
UBP1YDL122W THG1P53215 237 aaKnown RBP1.25□□□□□ -2.21
UBP1YDL122W DAD4P69851 72 aa1.25□□□□□ -2.21
UBP1YDL122W RUB1Q03919 77 aa1.25□□□□□ -2.21
UBP1YDL122W SCS22Q6Q595 175 aa1.25□□□□□ -2.21
UBP1YDL122W COX8P04039 78 aa1.24□□□□□ -2.21
UBP1YDL122W INO4P13902 151 aa1.24□□□□□ -2.21
UBP1YDL122W RPB7P34087 171 aa1.24□□□□□ -2.21
UBP1YDL122W YKR070WP36151 352 aaKnown RBP1.24□□□□□ -2.21
UBP1YDL122W YGR269WP40326 108 aa1.24□□□□□ -2.21
UBP1YDL122W PHS1P40857 217 aa1.24□□□□□ -2.21
UBP1YDL122W TVP18Q04767 167 aa1.24□□□□□ -2.21
UBP1YDL122W SFT2P38166 215 aa1.24□□□□□ -2.21
UBP1YDL122W YBL071CP38185 102 aa1.24□□□□□ -2.21
UBP1YDL122W YBR032WP38223 100 aa1.24□□□□□ -2.21
UBP1YDL122W DSE2P38844 325 aa1.24□□□□□ -2.21
UBP1YDL122W TMA23Q03525 211 aa1.24□□□□□ -2.21
UBP1YDL122W YDL241WQ07738 123 aa1.24□□□□□ -2.21
UBP1YDL122W YGL258W-AQ3E740 77 aa1.24□□□□□ -2.21
UBP1YDL122W YLR365WQ7LIF2 110 aa1.24□□□□□ -2.21
UBP1YDL122W LSM8P47093 109 aaKnown RBP1.23□□□□□ -2.21
UBP1YDL122W GPI11Q06636 219 aa1.23□□□□□ -2.21
UBP1YDL122W FIT2Q08906 153 aa1.23□□□□□ -2.21
UBP1YDL122W YCR050CP25630 102 aa1.23□□□□□ -2.21
UBP1YDL122W SAE3P89114 91 aa1.23□□□□□ -2.21
UBP1YDL122W KEI1Q06346 221 aa1.23□□□□□ -2.21
UBP1YDL122W YOL118CQ08259 102 aa1.23□□□□□ -2.21
UBP1YDL122W YDL157CQ12082 118 aa1.23□□□□□ -2.21
UBP1YDL122W GSP1P32835 219 aaKnown RBP1.22□□□□□ -2.21
UBP1YDL122W YHR007C-AQ07074 71 aa1.22□□□□□ -2.21
UBP1YDL122W FCF2Q12035 217 aaPredicted RBP1.22□□□□□ -2.21
UBP1YDL122W KTI11Q3E840 82 aa1.22□□□□□ -2.21
UBP1YDL122W FPR2P32472 135 aa1.21□□□□□ -2.22
UBP1YDL122W YGL149WP53116 101 aa1.21□□□□□ -2.22
UBP1YDL122W NMA1Q06178 401 aaKnown RBP1.21□□□□□ -2.22
UBP1YDL122W YPR145C-AQ2V2P0 78 aa1.21□□□□□ -2.22
UBP1YDL122W YPR108W-AQ3E7B3 70 aa1.21□□□□□ -2.22
UBP1YDL122W RPS25BP0C0T4 108 aaKnown RBP1.21□□□□□ -2.22
UBP1YDL122W EMP24P32803 203 aaKnown RBP1.21□□□□□ -2.22
UBP1YDL122W YHL042WP38729 150 aa1.21□□□□□ -2.22
UBP1YDL122W RPB11P38902 120 aa1.21□□□□□ -2.22
Retrieved 100 of 5,963 RNA–protein pairs in 27.9 ms