RNA–Protein interactions for RNA: YDL078C

MDH3, Transcript of Peroxisomal malate dehydrogenase, yeastyeast

Gene MDH3, Length 1,032 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MDH3YDL078C YGL258W-AQ3E740 77 aa4.51□□□□□ -1.69
MDH3YDL078C ERV1P27882 189 aa4.5□□□□□ -1.69
MDH3YDL078C MRPL38P35996 138 aaPredicted RBP4.5□□□□□ -1.69
MDH3YDL078C DFG10P40526 253 aa4.5□□□□□ -1.69
MDH3YDL078C YML122CQ03207 126 aa4.5□□□□□ -1.69
MDH3YDL078C YBR255C-AQ3E776 120 aa4.5□□□□□ -1.69
MDH3YDL078C YHR212W-AP0CX91 67 aa4.49□□□□□ -1.69
MDH3YDL078C YCR025CP25352 136 aa4.49□□□□□ -1.69
MDH3YDL078C YCR050CP25630 102 aa4.49□□□□□ -1.69
MDH3YDL078C YHL018WP38744 120 aaPredicted RBP4.49□□□□□ -1.69
MDH3YDL078C LST8P41318 303 aa4.49□□□□□ -1.69
MDH3YDL078C TOS8P53147 276 aa4.49□□□□□ -1.69
MDH3YDL078C CRH1P53301 507 aa4.49□□□□□ -1.69
MDH3YDL078C SWT21P53873 357 aaPredicted RBP4.49□□□□□ -1.69
MDH3YDL078C PBP4Q07362 185 aaKnown RBP4.49□□□□□ -1.69
MDH3YDL078C RPL28P02406 149 aaKnown RBP4.48□□□□□ -1.69
MDH3YDL078C QRI5P32344 111 aa4.48□□□□□ -1.69
MDH3YDL078C YBR144CP34215 104 aa4.48□□□□□ -1.69
MDH3YDL078C APS1P35181 156 aa4.48□□□□□ -1.69
MDH3YDL078C SVP26P38869 228 aa4.48□□□□□ -1.69
MDH3YDL078C YPL073CP40323 161 aa4.48□□□□□ -1.69
MDH3YDL078C SFT1P43682 97 aa4.48□□□□□ -1.69
MDH3YDL078C BRP1P53194 125 aa4.48□□□□□ -1.69
MDH3YDL078C YGR050CP53231 118 aa4.48□□□□□ -1.69
MDH3YDL078C YHP1Q04116 353 aa4.48□□□□□ -1.69
MDH3YDL078C YPL038W-AQ3E7B4 63 aa4.48□□□□□ -1.69
MDH3YDL078C RPL2AP0CX45 254 aaKnown RBP4.47□□□□□ -1.69
MDH3YDL078C RPL2BP0CX46 254 aaKnown RBP4.47□□□□□ -1.69
MDH3YDL078C MDM10P18409 493 aa4.47□□□□□ -1.69
MDH3YDL078C YPS1P32329 569 aa4.47□□□□□ -1.69
MDH3YDL078C SMP1P38128 452 aa4.47□□□□□ -1.69
MDH3YDL078C MRPL49P40858 161 aaPredicted RBP4.47□□□□□ -1.69
MDH3YDL078C SKI6P46948 246 aaPredicted RBP4.47□□□□□ -1.69
MDH3YDL078C YGR219WP53307 113 aa4.47□□□□□ -1.69
MDH3YDL078C YCL021W-AQ96VH3 125 aa4.47□□□□□ -1.69
MDH3YDL078C MDN1Q12019 4910 aaKnown RBP4.47□□□□□ -1.69
MDH3YDL078C RPS2P25443 254 aaKnown RBP4.46□□□□□ -1.7
MDH3YDL078C YNL200CP40165 246 aaKnown RBP4.46□□□□□ -1.7
MDH3YDL078C SDS23P53172 527 aa4.46□□□□□ -1.7
MDH3YDL078C CPD1P53314 239 aa4.46□□□□□ -1.7
MDH3YDL078C GPI19Q04082 140 aa4.46□□□□□ -1.7
MDH3YDL078C YPS3Q12303 508 aa4.46□□□□□ -1.7
MDH3YDL078C YBR126W-AQ8TGU7 68 aa4.46□□□□□ -1.7
MDH3YDL078C AQY1P0CD91 305 aa4.45□□□□□ -1.7
MDH3YDL078C YHR140WP38842 239 aa4.45□□□□□ -1.7
MDH3YDL078C HST4P53688 370 aa4.45□□□□□ -1.7
MDH3YDL078C SHH4Q06236 168 aa4.45□□□□□ -1.7
MDH3YDL078C LSM6Q06406 86 aaKnown RBP4.45□□□□□ -1.7
MDH3YDL078C IRC23Q08416 157 aa4.45□□□□□ -1.7
MDH3YDL078C KSH1Q8TGJ3 72 aa4.45□□□□□ -1.7
MDH3YDL078C RPS8AP0CX39 200 aaKnown RBP4.44□□□□□ -1.7
MDH3YDL078C RPS8BP0CX40 200 aaKnown RBP4.44□□□□□ -1.7
MDH3YDL078C MRS3P10566 314 aa4.44□□□□□ -1.7
MDH3YDL078C FZF1P32805 299 aa4.44□□□□□ -1.7
MDH3YDL078C PEX22P39718 180 aa4.44□□□□□ -1.7
MDH3YDL078C YIL014C-AQ02598 104 aa4.44□□□□□ -1.7
MDH3YDL078C YMR181CQ03231 154 aa4.44□□□□□ -1.7
MDH3YDL078C YHR139C-AO13536 103 aa4.43□□□□□ -1.7
MDH3YDL078C RPL23AP0CX41 137 aaKnown RBP4.43□□□□□ -1.7
MDH3YDL078C RPL23BP0CX42 137 aaKnown RBP4.43□□□□□ -1.7
MDH3YDL078C YBL071CP38185 102 aa4.43□□□□□ -1.7
MDH3YDL078C RRT1P38192 103 aa4.43□□□□□ -1.7
MDH3YDL078C YGR269WP40326 108 aa4.43□□□□□ -1.7
MDH3YDL078C YPI1P43587 155 aa4.43□□□□□ -1.7
MDH3YDL078C YNR071CP53757 342 aa4.43□□□□□ -1.7
MDH3YDL078C ATP19P81451 68 aa4.43□□□□□ -1.7
MDH3YDL078C Q0255P03881 472 aa4.42□□□□□ -1.7
MDH3YDL078C FPR2P32472 135 aa4.42□□□□□ -1.7
MDH3YDL078C MPC2P38857 129 aa4.42□□□□□ -1.7
MDH3YDL078C MBB1P39534 108 aa4.42□□□□□ -1.7
MDH3YDL078C YAR029WP39549 74 aa4.42□□□□□ -1.7
MDH3YDL078C YIL163CP40448 117 aa4.42□□□□□ -1.7
MDH3YDL078C MST27P53176 234 aa4.42□□□□□ -1.7
MDH3YDL078C RSM19P53733 91 aaPredicted RBP4.42□□□□□ -1.7
MDH3YDL078C YDR042CQ03205 200 aa4.42□□□□□ -1.7
MDH3YDL078C YMR007WQ03675 126 aa4.42□□□□□ -1.7
MDH3YDL078C CSH1P38287 376 aa4.41□□□□□ -1.7
MDH3YDL078C PAU7P39545 55 aa4.41□□□□□ -1.7
MDH3YDL078C RRT13P40042 185 aa4.41□□□□□ -1.7
MDH3YDL078C YLR281CQ05863 155 aa4.41□□□□□ -1.7
MDH3YDL078C BET1P22804 142 aa4.4□□□□□ -1.71
MDH3YDL078C YNL217WP40152 326 aa4.4□□□□□ -1.71
MDH3YDL078C POR2P40478 281 aa4.4□□□□□ -1.71
MDH3YDL078C TIM18Q08749 192 aa4.4□□□□□ -1.71
MDH3YDL078C YMR316C-AI2HB70 103 aa4.39□□□□□ -1.71
MDH3YDL078C PIS1P06197 220 aaKnown RBP4.39□□□□□ -1.71
MDH3YDL078C UBC4P15731 148 aa4.39□□□□□ -1.71
MDH3YDL078C YCR022CP25620 114 aa4.39□□□□□ -1.71
MDH3YDL078C YGR018CP53211 109 aa4.39□□□□□ -1.71
MDH3YDL078C EMC6Q12431 108 aa4.39□□□□□ -1.71
MDH3YDL078C YDR381C-AQ3E6R5 114 aa4.39□□□□□ -1.71
MDH3YDL078C YMR175W-AQ3E766 64 aa4.39□□□□□ -1.71
MDH3YDL078C IGO2Q9P305 131 aa4.39□□□□□ -1.71
MDH3YDL078C YDR274CP87283 123 aa4.38□□□□□ -1.71
MDH3YDL078C USV1Q12132 391 aa4.38□□□□□ -1.71
MDH3YDL078C YSY6P38374 65 aa4.37□□□□□ -1.71
MDH3YDL078C YJL027CP47063 138 aaPredicted RBP4.37□□□□□ -1.71
MDH3YDL078C HAL1Q01766 294 aa4.37□□□□□ -1.71
MDH3YDL078C YPR013CQ12145 317 aa4.37□□□□□ -1.71
MDH3YDL078C MRPL31P14063 131 aaPredicted RBP4.36□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms