RNA–Protein interactions for RNA: YDL064W

UBC9, Transcript of SUMO-conjugating enzyme involved in the Smt3p conjugation pathway, yeastyeast

Gene UBC9, Length 474 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBC9YDL064W TY1B-NL2Q99337 1749 aaKnown RBP0.64□□□□□ -2.31
UBC9YDL064W YMR321CQ04898 105 aa0.63□□□□□ -2.31
UBC9YDL064W YLR194CQ05777 254 aa0.63□□□□□ -2.31
UBC9YDL064W YNL277W-AQ3E7Z0 62 aa0.63□□□□□ -2.31
UBC9YDL064W APC1P53886 1748 aa0.63□□□□□ -2.31
UBC9YDL064W SMC4Q12267 1418 aa0.63□□□□□ -2.31
UBC9YDL064W RIM15P43565 1770 aa0.62□□□□□ -2.31
UBC9YDL064W TEL1P38110 2787 aa0.62□□□□□ -2.31
UBC9YDL064W YRF1-3P0CX14 1859 aa0.62□□□□□ -2.31
UBC9YDL064W YRF1-7P0CX15 1859 aa0.62□□□□□ -2.31
UBC9YDL064W YRF1-6P53819 1859 aa0.62□□□□□ -2.31
UBC9YDL064W IRA1P18963 3092 aa0.62□□□□□ -2.31
UBC9YDL064W CAT8P39113 1433 aa0.62□□□□□ -2.31
UBC9YDL064W SEC16P48415 2195 aaKnown RBP0.62□□□□□ -2.31
UBC9YDL064W GSP1P32835 219 aaKnown RBP0.61□□□□□ -2.31
UBC9YDL064W TY4B-HP0C2J7 1802 aa0.61□□□□□ -2.31
UBC9YDL064W TY4B-JP47024 1803 aa0.61□□□□□ -2.31
UBC9YDL064W TY3B-IQ7LHG5 1498 aaKnown RBP0.61□□□□□ -2.31
UBC9YDL064W KRE5P22023 1365 aa0.6□□□□□ -2.31
UBC9YDL064W NUP192P47054 1683 aa0.6□□□□□ -2.31
UBC9YDL064W MEC1P38111 2368 aa0.6□□□□□ -2.31
UBC9YDL064W HYM1P32464 399 aa0.6□□□□□ -2.31
UBC9YDL064W RPS20P38701 121 aaKnown RBP0.6□□□□□ -2.31
UBC9YDL064W YGR017WP53210 297 aa0.6□□□□□ -2.31
UBC9YDL064W LDB18Q07887 179 aa0.6□□□□□ -2.31
UBC9YDL064W SRB8P25648 1427 aa0.6□□□□□ -2.31
UBC9YDL064W PMD1P32634 1753 aa0.6□□□□□ -2.31
UBC9YDL064W MDN1Q12019 4910 aaKnown RBP0.6□□□□□ -2.31
UBC9YDL064W PDR12Q02785 1511 aa0.59□□□□□ -2.31
UBC9YDL064W YBR056W-AI2HB52 66 aa0.59□□□□□ -2.31
UBC9YDL064W MRPL31P14063 131 aaPredicted RBP0.59□□□□□ -2.31
UBC9YDL064W YIL163CP40448 117 aa0.59□□□□□ -2.31
UBC9YDL064W SFT1P43682 97 aa0.59□□□□□ -2.31
UBC9YDL064W YDR278CQ05612 105 aa0.59□□□□□ -2.31
UBC9YDL064W FCF2Q12035 217 aaPredicted RBP0.59□□□□□ -2.31
UBC9YDL064W IRA2P19158 3079 aa0.58□□□□□ -2.32
UBC9YDL064W RSF2P46974 1380 aa0.58□□□□□ -2.32
UBC9YDL064W UTP10P42945 1769 aaKnown RBP0.58□□□□□ -2.32
UBC9YDL064W FIG2P25653 1609 aa0.58□□□□□ -2.32
UBC9YDL064W RPL36BO14455 100 aaKnown RBP0.58□□□□□ -2.32
UBC9YDL064W RPL36AP05745 100 aaPredicted RBP0.58□□□□□ -2.32
UBC9YDL064W GAT4P40569 121 aa0.58□□□□□ -2.32
UBC9YDL064W ATP14Q12349 124 aa0.58□□□□□ -2.32
UBC9YDL064W YLR361C-AQ3E795 98 aa0.58□□□□□ -2.32
UBC9YDL064W URA2P07259 2214 aaKnown RBP0.57□□□□□ -2.32
UBC9YDL064W GIM4P40005 111 aaKnown RBP0.57□□□□□ -2.32
UBC9YDL064W TIM8P57744 87 aa0.57□□□□□ -2.32
UBC9YDL064W GEA1P47102 1408 aaPredicted RBP0.56□□□□□ -2.32
UBC9YDL064W DYN1P36022 4092 aa0.56□□□□□ -2.32
UBC9YDL064W SUA7P29055 345 aaPredicted RBP0.56□□□□□ -2.32
UBC9YDL064W TRA1P38811 3744 aa0.55□□□□□ -2.32
UBC9YDL064W MED11Q99278 115 aa0.55□□□□□ -2.32
UBC9YDL064W SEC59P20048 519 aa0.54□□□□□ -2.32
UBC9YDL064W POR2P40478 281 aa0.54□□□□□ -2.32
UBC9YDL064W YGL204CP53089 101 aa0.54□□□□□ -2.32
UBC9YDL064W ERV14P53173 138 aa0.54□□□□□ -2.32
UBC9YDL064W CSF1Q12150 2958 aa0.54□□□□□ -2.32
UBC9YDL064W YOR376W-AQ3E805 51 aa0.54□□□□□ -2.32
UBC9YDL064W ECM29P38737 1868 aa0.54□□□□□ -2.32
UBC9YDL064W EMP24P32803 203 aaKnown RBP0.53□□□□□ -2.32
UBC9YDL064W YJR128WP47162 119 aa0.53□□□□□ -2.32
UBC9YDL064W MPC1P53157 130 aaKnown RBP0.53□□□□□ -2.32
UBC9YDL064W MYO1P08964 1928 aa0.52□□□□□ -2.33
UBC9YDL064W SRX1P36077 127 aa0.52□□□□□ -2.33
UBC9YDL064W YIL014C-AQ02598 104 aa0.52□□□□□ -2.33
UBC9YDL064W CNL1Q06333 122 aa0.52□□□□□ -2.33
UBC9YDL064W Q0144Q9ZZW2 109 aa0.52□□□□□ -2.33
UBC9YDL064W FLO1P32768 1537 aa0.52□□□□□ -2.33
UBC9YDL064W HKR1P41809 1802 aa0.52□□□□□ -2.33
UBC9YDL064W AUA1P32450 94 aa0.51□□□□□ -2.33
UBC9YDL064W HPA2Q06592 156 aa0.51□□□□□ -2.33
UBC9YDL064W POL2P21951 2222 aaKnown RBP0.5□□□□□ -2.33
UBC9YDL064W YKL044WP36092 106 aa0.5□□□□□ -2.33
UBC9YDL064W LCL1Q02786 101 aa0.5□□□□□ -2.33
UBC9YDL064W ENV10Q99382 181 aa0.5□□□□□ -2.33
UBC9YDL064W YJL197C-AP0C5P0 93 aa0.49□□□□□ -2.33
UBC9YDL064W YFR035CP43608 114 aa0.49□□□□□ -2.33
UBC9YDL064W YGR042WP53227 271 aa0.49□□□□□ -2.33
UBC9YDL064W GPI19Q04082 140 aa0.49□□□□□ -2.33
UBC9YDL064W MOT1P32333 1867 aa0.48□□□□□ -2.33
UBC9YDL064W RPO41P13433 1351 aaKnown RBP0.48□□□□□ -2.33
UBC9YDL064W RPL22AP05749 121 aaKnown RBP0.48□□□□□ -2.33
UBC9YDL064W YDR524C-BQ3E6R4 66 aa0.48□□□□□ -2.33
UBC9YDL064W BRR2P32639 2163 aaKnown RBP0.47□□□□□ -2.33
UBC9YDL064W YLR419WQ06698 1435 aaKnown RBP0.47□□□□□ -2.33
UBC9YDL064W LYS2P07702 1392 aa0.47□□□□□ -2.33
UBC9YDL064W ICS3P47034 131 aa0.47□□□□□ -2.33
UBC9YDL064W OCA6Q12454 224 aa0.47□□□□□ -2.33
UBC9YDL064W PAU12P53343 120 aa0.46□□□□□ -2.34
UBC9YDL064W YGR240C-AQ3E786 66 aa0.46□□□□□ -2.34
UBC9YDL064W SAE3P89114 91 aa0.45□□□□□ -2.34
UBC9YDL064W ACP1P32463 125 aa0.44□□□□□ -2.34
UBC9YDL064W SNF11P38956 169 aa0.44□□□□□ -2.34
UBC9YDL064W YLR285C-AQ3E771 56 aa0.44□□□□□ -2.34
UBC9YDL064W DYN2Q02647 92 aa0.43□□□□□ -2.34
UBC9YDL064W SPC2Q04969 178 aa0.43□□□□□ -2.34
UBC9YDL064W COX23P38824 151 aa0.41□□□□□ -2.34
UBC9YDL064W YHR130CP38834 111 aa0.41□□□□□ -2.34
UBC9YDL064W CYB5P40312 120 aa0.41□□□□□ -2.34
UBC9YDL064W MRPS12P53732 153 aa0.41□□□□□ -2.34
Retrieved 100 of 5,963 RNA–protein pairs in 19.4 ms