RNA–Protein interactions for RNA: ENST00000566409.1

FANCA-220, Transcript of FA complementation group A, humanhuman

TSL 1 (best)

Gene FANCA, Length 395 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FANCA-220ENST00000566409 SGSM1Q2NKQ1 1148 aa15.61■□□□□ 0.09
FANCA-220ENST00000566409 ZNF528Q3MIS6 628 aa15.61■□□□□ 0.09
FANCA-220ENST00000566409 SPOPLQ6IQ16 392 aa15.61■□□□□ 0.09
FANCA-220ENST00000566409 TSSK4Q6SA08 328 aa15.61■□□□□ 0.09
FANCA-220ENST00000566409 DENND5BQ6ZUT9 1274 aa15.61■□□□□ 0.09
FANCA-220ENST00000566409 NELL1Q92832 810 aa15.61■□□□□ 0.09
FANCA-220ENST00000566409 ERCC4Q92889 916 aaPredicted RBP15.61■□□□□ 0.09
FANCA-220ENST00000566409 CEP295NLQ96MC4 621 aa15.61■□□□□ 0.09
FANCA-220ENST00000566409 TTLL2Q9BWV7 592 aa15.61■□□□□ 0.09
FANCA-220ENST00000566409 TRPC7Q9HCX4 862 aa15.61■□□□□ 0.09
FANCA-220ENST00000566409 PRMT8Q9NR22 394 aaPredicted RBP15.61■□□□□ 0.09
FANCA-220ENST00000566409 RBM12Q9NTZ6 932 aaKnown RBP15.61■□□□□ 0.09
FANCA-220ENST00000566409 KIF20AO95235 890 aa15.6■□□□□ 0.09
FANCA-220ENST00000566409 HLA-DRAP01903 254 aa15.6■□□□□ 0.09
FANCA-220ENST00000566409 TDGF1P13385 188 aa15.6■□□□□ 0.09
FANCA-220ENST00000566409 GCLMP48507 274 aa15.6■□□□□ 0.09
FANCA-220ENST00000566409 NOP14P78316 857 aaKnown RBP15.6■□□□□ 0.09
FANCA-220ENST00000566409 ADAM9Q13443 819 aa15.6■□□□□ 0.09
FANCA-220ENST00000566409 MAMSTRQ6ZN01 415 aa15.6■□□□□ 0.09
FANCA-220ENST00000566409 RALGPS2Q86X27 583 aaPredicted RBP15.6■□□□□ 0.09
FANCA-220ENST00000566409 ARL14EPQ8N8R7 260 aaPredicted RBP15.6■□□□□ 0.09
FANCA-220ENST00000566409 SPATA20Q8TB22 786 aa15.6■□□□□ 0.09
FANCA-220ENST00000566409 TAS1R2Q8TE23 839 aa15.6■□□□□ 0.09
FANCA-220ENST00000566409 EEF2KMTQ96G04 330 aa15.6■□□□□ 0.09
FANCA-220ENST00000566409 KCNK16Q96T55 309 aa15.6■□□□□ 0.09
FANCA-220ENST00000566409 EBF3Q9H4W6 596 aa15.6■□□□□ 0.09
FANCA-220ENST00000566409 APOBEC3GQ9HC16 384 aaKnown RBP15.6■□□□□ 0.09
FANCA-220ENST00000566409 UTP3Q9NQZ2 479 aaKnown RBP eCLIP15.6■□□□□ 0.094e-6■■■■□ 26
FANCA-220ENST00000566409 THG1LQ9NWX6 298 aaKnown RBP15.6■□□□□ 0.09
FANCA-220ENST00000566409 HMGXB4Q9UGU5 601 aa15.6■□□□□ 0.09
FANCA-220ENST00000566409 CEP250Q9BV73 2442 aa15.59■□□□□ 0.09
FANCA-220ENST00000566409 DCHS1Q96JQ0 3298 aa15.59■□□□□ 0.09
FANCA-220ENST00000566409 TRIM66O15016 1216 aa15.59■□□□□ 0.09
FANCA-220ENST00000566409 USP17L7P0C7H9 530 aa15.59■□□□□ 0.09
FANCA-220ENST00000566409 ARSAP15289 507 aa15.59■□□□□ 0.09
FANCA-220ENST00000566409 ANXA13P27216 316 aa15.59■□□□□ 0.09
FANCA-220ENST00000566409 PRCPP42785 496 aa15.59■□□□□ 0.09
FANCA-220ENST00000566409 ASPAP45381 313 aa15.59■□□□□ 0.09
FANCA-220ENST00000566409 FAM160A1Q05DH4 1040 aa15.59■□□□□ 0.09
FANCA-220ENST00000566409 ORC1Q13415 861 aa15.59■□□□□ 0.09
FANCA-220ENST00000566409 PON2Q15165 354 aa15.59■□□□□ 0.09
FANCA-220ENST00000566409 ZNF77Q15935 545 aa15.59■□□□□ 0.09
FANCA-220ENST00000566409 ITPRIPL2Q3MIP1 535 aa15.59■□□□□ 0.09
FANCA-220ENST00000566409 INTS8Q75QN2 995 aaKnown RBP15.59■□□□□ 0.09
FANCA-220ENST00000566409 ACOT1Q86TX2 421 aa15.59■□□□□ 0.09
FANCA-220ENST00000566409 FAM186BQ8IYM0 893 aa15.59■□□□□ 0.09
FANCA-220ENST00000566409 MSANTD3Q96H12 275 aa15.59■□□□□ 0.09
FANCA-220ENST00000566409 ELOVL4Q9GZR5 314 aa15.59■□□□□ 0.09
FANCA-220ENST00000566409 RNF38Q9H0F5 515 aa15.59■□□□□ 0.09
FANCA-220ENST00000566409 KIF9Q9HAQ2 790 aa15.59■□□□□ 0.09
FANCA-220ENST00000566409 C2orf42Q9NWW7 574 aa15.59■□□□□ 0.09
FANCA-220ENST00000566409 MYOFQ9NZM1 2061 aa15.59■□□□□ 0.09
FANCA-220ENST00000566409 TRAV19A0A0A6YYK7 116 aa15.58■□□□□ 0.08
FANCA-220ENST00000566409 ZNF840PA6NDX5 716 aa15.58■□□□□ 0.08
FANCA-220ENST00000566409 CKMP06732 381 aa15.58■□□□□ 0.08
FANCA-220ENST00000566409 HDCP19113 662 aa15.58■□□□□ 0.08
FANCA-220ENST00000566409 PSMC2P35998 433 aaKnown RBP15.58■□□□□ 0.08
FANCA-220ENST00000566409 NDST1P52848 882 aa15.58■□□□□ 0.08
FANCA-220ENST00000566409 TAF10Q12962 218 aa15.58■□□□□ 0.08
FANCA-220ENST00000566409 RUNX3Q13761 415 aa15.58■□□□□ 0.08
FANCA-220ENST00000566409 CCINQ13939 588 aa15.58■□□□□ 0.08
FANCA-220ENST00000566409 MTF1Q14872 753 aa15.58■□□□□ 0.08
FANCA-220ENST00000566409 EDRF1Q3B7T1 1238 aa15.58■□□□□ 0.08
FANCA-220ENST00000566409 NAIF1Q69YI7 327 aaPredicted RBP15.58■□□□□ 0.08
FANCA-220ENST00000566409 Q6ZS52 159 aa15.58■□□□□ 0.08
FANCA-220ENST00000566409 FAM35AQ86V20 835 aa15.58■□□□□ 0.08
FANCA-220ENST00000566409 FUKQ8N0W3 1084 aa15.58■□□□□ 0.08
FANCA-220ENST00000566409 ADSSL1Q8N142 457 aa15.58■□□□□ 0.08
FANCA-220ENST00000566409 CRYBG2Q8N1P7 616 aa15.58■□□□□ 0.08
FANCA-220ENST00000566409 SUMF1Q8NBK3 374 aa15.58■□□□□ 0.08
FANCA-220ENST00000566409 ZBTB44Q8NCP5 570 aa15.58■□□□□ 0.08
FANCA-220ENST00000566409 TAF4BQ92750 862 aa15.58■□□□□ 0.08
FANCA-220ENST00000566409 TWNKQ96RR1 684 aa15.58■□□□□ 0.08
FANCA-220ENST00000566409 SEMA4AQ9H3S1 761 aa15.58■□□□□ 0.08
FANCA-220ENST00000566409 PCDHA5Q9Y5H7 936 aa15.58■□□□□ 0.08
FANCA-220ENST00000566409 DNAH14Q0VDD8 3507 aa15.57■□□□□ 0.08
FANCA-220ENST00000566409 GOLGA6L4A6NEF3 574 aa15.57■□□□□ 0.08
FANCA-220ENST00000566409 TNFRSF10BO14763 440 aa15.57■□□□□ 0.08
FANCA-220ENST00000566409 BEST1O76090 585 aa15.57■□□□□ 0.08
FANCA-220ENST00000566409 LMNAP02545 664 aaKnown RBP15.57■□□□□ 0.08
FANCA-220ENST00000566409 CCDC130P13994 396 aa15.57■□□□□ 0.08
FANCA-220ENST00000566409 RPL13P26373 211 aaKnown RBP15.57■□□□□ 0.08
FANCA-220ENST00000566409 HOXC13P31276 330 aa15.57■□□□□ 0.08
FANCA-220ENST00000566409 PIK3CAP42336 1068 aa15.57■□□□□ 0.08
FANCA-220ENST00000566409 PMS1P54277 932 aaKnown RBP15.57■□□□□ 0.08
FANCA-220ENST00000566409 SATB1Q01826 763 aa15.57■□□□□ 0.08
FANCA-220ENST00000566409 ENPEPQ07075 957 aa15.57■□□□□ 0.08
FANCA-220ENST00000566409 USP4Q13107 963 aa15.57■□□□□ 0.08
FANCA-220ENST00000566409 COBLL1Q53SF7 1204 aa15.57■□□□□ 0.08
FANCA-220ENST00000566409 ZNF658Q5TYW1 1059 aaPredicted RBP15.57■□□□□ 0.08
FANCA-220ENST00000566409 C1orf228Q6PIY5 440 aa15.57■□□□□ 0.08
FANCA-220ENST00000566409 NUP93Q8N1F7 819 aa15.57■□□□□ 0.08
FANCA-220ENST00000566409 C12orf29Q8N999 325 aa15.57■□□□□ 0.08
FANCA-220ENST00000566409 ZMIZ2Q8NF64 920 aa15.57■□□□□ 0.08
FANCA-220ENST00000566409 SCAMP5Q8TAC9 235 aa15.57■□□□□ 0.08
FANCA-220ENST00000566409 SH3RF2Q8TEC5 729 aa15.57■□□□□ 0.08
FANCA-220ENST00000566409 SEMA4DQ92854 862 aa15.57■□□□□ 0.08
FANCA-220ENST00000566409 TNIP3Q96KP6 325 aa15.57■□□□□ 0.08
FANCA-220ENST00000566409 GSDMAQ96QA5 445 aa15.57■□□□□ 0.08
FANCA-220ENST00000566409 SMOQ99835 787 aa15.57■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 116.2 ms