RNA–Protein interactions for RNA: ENST00000375425.9

NELFE-201, Transcript of negative elongation factor complex member E, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NELFE, Length 1,405 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-201ENST00000375425 FBRSL1Q9HCM7 1045 aaKnown RBP15.17■□□□□ 0.02
NELFE-201ENST00000375425 DUS2Q9NX74 493 aaKnown RBP15.17■□□□□ 0.02
NELFE-201ENST00000375425 TRPM5Q9NZQ8 1165 aa15.17■□□□□ 0.02
NELFE-201ENST00000375425 CHURC1-FNTBB4DL54 471 aa15.17■□□□□ 0.02
NELFE-201ENST00000375425 CLDN5O00501 218 aa15.17■□□□□ 0.02
NELFE-201ENST00000375425 PDXKO00764 312 aa15.17■□□□□ 0.02
NELFE-201ENST00000375425 GJA4P35212 333 aa15.17■□□□□ 0.02
NELFE-201ENST00000375425 SYKP43405 635 aa15.17■□□□□ 0.02
NELFE-201ENST00000375425 FNTBP49356 437 aa15.17■□□□□ 0.02
NELFE-201ENST00000375425 GALK1P51570 392 aa15.17■□□□□ 0.02
NELFE-201ENST00000375425 NDUFA8P51970 172 aa15.17■□□□□ 0.02
NELFE-201ENST00000375425 AP3M2P53677 418 aa15.17■□□□□ 0.02
NELFE-201ENST00000375425 CACNA2D1P54289 1103 aa15.17■□□□□ 0.02
NELFE-201ENST00000375425 FOXK2Q01167 660 aa15.17■□□□□ 0.02
NELFE-201ENST00000375425 NCOA4Q13772 614 aa15.17■□□□□ 0.02
NELFE-201ENST00000375425 KCNB1Q14721 858 aa15.17■□□□□ 0.02
NELFE-201ENST00000375425 LPAL2Q16609 132 aa15.17■□□□□ 0.02
NELFE-201ENST00000375425 FSTL4Q6MZW2 842 aa15.17■□□□□ 0.02
NELFE-201ENST00000375425 B3GALNT2Q8NCR0 500 aa15.17■□□□□ 0.02
NELFE-201ENST00000375425 SH3RF2Q8TEC5 729 aa15.17■□□□□ 0.02
NELFE-201ENST00000375425 ELMO3Q96BJ8 720 aa15.17■□□□□ 0.02
NELFE-201ENST00000375425 C8orf48Q96LL4 319 aa15.17■□□□□ 0.02
NELFE-201ENST00000375425 B3GNT5Q9BYG0 378 aa15.17■□□□□ 0.02
NELFE-201ENST00000375425 TMEM30AQ9NV96 361 aa15.17■□□□□ 0.02
NELFE-201ENST00000375425 EHD2Q9NZN4 543 aa15.17■□□□□ 0.02
NELFE-201ENST00000375425 ZNF840PA6NDX5 716 aa15.16■□□□□ 0.02
NELFE-201ENST00000375425 HRO43593 1189 aa15.16■□□□□ 0.02
NELFE-201ENST00000375425 NR3C1P04150 777 aa15.16■□□□□ 0.02
NELFE-201ENST00000375425 RPN1P04843 607 aaKnown RBP15.16■□□□□ 0.02
NELFE-201ENST00000375425 HOXC13P31276 330 aa15.16■□□□□ 0.02
NELFE-201ENST00000375425 NOP14P78316 857 aaKnown RBP15.16■□□□□ 0.02
NELFE-201ENST00000375425 DLG4P78352 724 aa15.16■□□□□ 0.02
NELFE-201ENST00000375425 ZXDBP98169 803 aa15.16■□□□□ 0.02
NELFE-201ENST00000375425 ZNF699Q32M78 642 aa15.16■□□□□ 0.02
NELFE-201ENST00000375425 HEATR6Q6AI08 1181 aaKnown RBP15.16■□□□□ 0.02
NELFE-201ENST00000375425 PKN3Q6P5Z2 889 aa15.16■□□□□ 0.02
NELFE-201ENST00000375425 ERMP1Q7Z2K6 904 aa15.16■□□□□ 0.02
NELFE-201ENST00000375425 TTLL2Q9BWV7 592 aa15.16■□□□□ 0.02
NELFE-201ENST00000375425 ZNF518BQ9C0D4 1074 aa15.16■□□□□ 0.02
NELFE-201ENST00000375425 RNF38Q9H0F5 515 aa15.16■□□□□ 0.02
NELFE-201ENST00000375425 LINC00597Q9H2U6 94 aa15.16■□□□□ 0.02
NELFE-201ENST00000375425 SMYD3Q9H7B4 428 aa15.16■□□□□ 0.02
NELFE-201ENST00000375425 RAB23Q9ULC3 237 aa15.16■□□□□ 0.02
NELFE-201ENST00000375425 ARHGAP26Q9UNA1 814 aa15.16■□□□□ 0.02
NELFE-201ENST00000375425 GTF3C3Q9Y5Q9 886 aa15.16■□□□□ 0.02
NELFE-201ENST00000375425 WNT6Q9Y6F9 365 aa15.16■□□□□ 0.02
NELFE-201ENST00000375425 CLSTN1O94985 981 aa15.15■□□□□ 0.02
NELFE-201ENST00000375425 VNN1O95497 513 aa15.15■□□□□ 0.02
NELFE-201ENST00000375425 ABL1P00519 1130 aa15.15■□□□□ 0.02
NELFE-201ENST00000375425 EGFP01133 1207 aa15.15■□□□□ 0.02
NELFE-201ENST00000375425 PPP3CCP48454 512 aa15.15■□□□□ 0.02
NELFE-201ENST00000375425 IFNAR2P48551 515 aa15.15■□□□□ 0.02
NELFE-201ENST00000375425 PDE6CP51160 858 aa15.15■□□□□ 0.02
NELFE-201ENST00000375425 TAF10Q12962 218 aa15.15■□□□□ 0.02
NELFE-201ENST00000375425 USP4Q13107 963 aa15.15■□□□□ 0.02
NELFE-201ENST00000375425 SRSF5Q13243 272 aaKnown RBP15.15■□□□□ 0.02
NELFE-201ENST00000375425 SIM2Q14190 667 aaPredicted RBP15.15■□□□□ 0.02
NELFE-201ENST00000375425 EML3Q32P44 896 aa15.15■□□□□ 0.02
NELFE-201ENST00000375425 ZNF667Q5HYK9 610 aa15.15■□□□□ 0.02
NELFE-201ENST00000375425 CEP135Q66GS9 1140 aa15.15■□□□□ 0.02
NELFE-201ENST00000375425 NAIF1Q69YI7 327 aaPredicted RBP15.15■□□□□ 0.02
NELFE-201ENST00000375425 PRR23BQ6ZRT6 265 aa15.15■□□□□ 0.02
NELFE-201ENST00000375425 LONP2Q86WA8 852 aa15.15■□□□□ 0.02
NELFE-201ENST00000375425 CPA6Q8N4T0 437 aa15.15■□□□□ 0.02
NELFE-201ENST00000375425 GPR161Q8N6U8 529 aaKnown RBP15.15■□□□□ 0.02
NELFE-201ENST00000375425 ATP2A3Q93084 1043 aa15.15■□□□□ 0.02
NELFE-201ENST00000375425 P2RY13Q9BPV8 354 aa15.15■□□□□ 0.02
NELFE-201ENST00000375425 ELOVL4Q9GZR5 314 aa15.15■□□□□ 0.02
NELFE-201ENST00000375425 GMEB2Q9UKD1 530 aa15.15■□□□□ 0.02
NELFE-201ENST00000375425 FAM237AA0A1B0GTK4 181 aa15.14■□□□□ 0.01
NELFE-201ENST00000375425 LEFTY2O00292 366 aa15.14■□□□□ 0.01
NELFE-201ENST00000375425 CALUO43852 315 aaPredicted RBP15.14■□□□□ 0.01
NELFE-201ENST00000375425 PRR29P0C7W0 189 aa15.14■□□□□ 0.01
NELFE-201ENST00000375425 TCF3P15923 654 aa15.14■□□□□ 0.01
NELFE-201ENST00000375425 PFKLP17858 780 aa15.14■□□□□ 0.01
NELFE-201ENST00000375425 DRD1P21728 446 aa15.14■□□□□ 0.01
NELFE-201ENST00000375425 TGM1P22735 817 aa15.14■□□□□ 0.01
NELFE-201ENST00000375425 HOXA6P31267 233 aa15.14■□□□□ 0.01
NELFE-201ENST00000375425 CNR2P34972 360 aa15.14■□□□□ 0.01
NELFE-201ENST00000375425 RAP1GAPP47736 663 aa15.14■□□□□ 0.01
NELFE-201ENST00000375425 SGSM1Q2NKQ1 1148 aa15.14■□□□□ 0.01
NELFE-201ENST00000375425 ZACNQ401N2 412 aa15.14■□□□□ 0.01
NELFE-201ENST00000375425 EXOC4Q96A65 974 aa15.14■□□□□ 0.01
NELFE-201ENST00000375425 KCNK16Q96T55 309 aa15.14■□□□□ 0.01
NELFE-201ENST00000375425 SCAND2PQ9GZW5 306 aaPredicted RBP15.14■□□□□ 0.01
NELFE-201ENST00000375425 TRAF3IP3Q9Y228 551 aa15.14■□□□□ 0.01
NELFE-201ENST00000375425 FRMD4BQ9Y2L6 1034 aa15.14■□□□□ 0.01
NELFE-201ENST00000375425 ATP6V1DQ9Y5K8 247 aa15.14■□□□□ 0.01
NELFE-201ENST00000375425 DENND4CQ5VZ89 1909 aa15.14■□□□□ 0.01
NELFE-201ENST00000375425 IKBKBO14920 756 aa15.13■□□□□ 0.01
NELFE-201ENST00000375425 ATG13O75143 517 aa15.13■□□□□ 0.01
NELFE-201ENST00000375425 RNF40O75150 1001 aa15.13■□□□□ 0.01
NELFE-201ENST00000375425 RHOBTB3O94955 611 aa15.13■□□□□ 0.01
NELFE-201ENST00000375425 KIF20AO95235 890 aa15.13■□□□□ 0.01
NELFE-201ENST00000375425 YWHAQP27348 245 aa15.13■□□□□ 0.01
NELFE-201ENST00000375425 SLC7A9P82251 487 aa15.13■□□□□ 0.01
NELFE-201ENST00000375425 DPYDQ12882 1025 aa15.13■□□□□ 0.01
NELFE-201ENST00000375425 IFRD2Q12894 506 aaPredicted RBP15.13■□□□□ 0.01
NELFE-201ENST00000375425 NR1H3Q13133 447 aa15.13■□□□□ 0.01
NELFE-201ENST00000375425 SCARA5Q6ZMJ2 495 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms