RNA–Protein interactions for RNA: snR47

snR47, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR47, Length 99 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR47snR47 YMR001C-AQ8TGS9 76 aa-3.32□□□□□ -2.94
snR47snR47 YER181CP40097 107 aa-3.33□□□□□ -2.94
snR47snR47 COX19Q3E731 98 aa-3.33□□□□□ -2.94
snR47snR47 PAU21P0CE86 164 aa-3.34□□□□□ -2.94
snR47snR47 PAU22P0CE87 164 aa-3.34□□□□□ -2.94
snR47snR47 RPC19P28000 142 aaKnown RBP-3.34□□□□□ -2.94
snR47snR47 HSK3P69852 69 aa-3.34□□□□□ -2.94
snR47snR47 RPS28BP0C0X0 67 aaKnown RBP-3.35□□□□□ -2.95
snR47snR47 PAM16P42949 149 aa-3.35□□□□□ -2.95
snR47snR47 YGR025WP53216 100 aa-3.35□□□□□ -2.95
snR47snR47 YCL048W-AQ2V2Q2 79 aa-3.35□□□□□ -2.95
snR47snR47 CBF1P17106 351 aa-3.36□□□□□ -2.95
snR47snR47 SHG1P38337 142 aa-3.36□□□□□ -2.95
snR47snR47 DLS1P40366 167 aa-3.36□□□□□ -2.95
snR47snR47 QCR10P37299 77 aa-3.37□□□□□ -2.95
snR47snR47 MSS2P40990 351 aa-3.37□□□□□ -2.95
snR47snR47 LSM1P47017 172 aaKnown RBP-3.37□□□□□ -2.95
snR47snR47 LSM8P47093 109 aaKnown RBP-3.37□□□□□ -2.95
snR47snR47 SDH7Q04401 133 aa-3.37□□□□□ -2.95
snR47snR47 YLR118CQ12354 227 aa-3.37□□□□□ -2.95
snR47snR47 TY1B-DR5P0C2I2 1755 aa-3.38□□□□□ -2.95
snR47snR47 TY1B-DR6P0C2I3 1755 aa-3.38□□□□□ -2.95
snR47snR47 TY1B-LR2P0C2I5 1755 aa-3.38□□□□□ -2.95
snR47snR47 TY1B-PR1P0C2I9 1755 aaKnown RBP-3.38□□□□□ -2.95
snR47snR47 TY1B-PR2P0C2J0 1756 aa-3.38□□□□□ -2.95
snR47snR47 TY1B-JR1P47098 1755 aa-3.38□□□□□ -2.95
snR47snR47 TY1B-JR2P47100 1755 aaKnown RBP-3.38□□□□□ -2.95
snR47snR47 TY1B-ML2Q03434 1755 aaKnown RBP-3.38□□□□□ -2.95
snR47snR47 TY1B-ER1Q03612 1755 aa-3.38□□□□□ -2.95
snR47snR47 TY1B-DR1Q03855 1755 aa-3.38□□□□□ -2.95
snR47snR47 TY1B-MR2Q04670 1755 aaKnown RBP-3.38□□□□□ -2.95
snR47snR47 TY1B-ML1Q04711 1755 aaKnown RBP-3.38□□□□□ -2.95
snR47snR47 TY1B-GR1Q12141 1755 aa-3.38□□□□□ -2.95
snR47snR47 TY1B-GR2Q12269 1755 aa-3.38□□□□□ -2.95
snR47snR47 TY1B-OLQ12273 1755 aa-3.38□□□□□ -2.95
snR47snR47 TY1B-PLQ12414 1755 aaKnown RBP-3.38□□□□□ -2.95
snR47snR47 TY1B-ORQ92393 1755 aa-3.38□□□□□ -2.95
snR47snR47 TY1B-DR3Q99231 1755 aa-3.38□□□□□ -2.95
snR47snR47 RPL30P14120 105 aaKnown RBP-3.38□□□□□ -2.95
snR47snR47 RPS28AQ3E7X9 67 aaPredicted RBP-3.38□□□□□ -2.95
snR47snR47 ECM12O13529 151 aa-3.39□□□□□ -2.95
snR47snR47 SEC59P20048 519 aa-3.39□□□□□ -2.95
snR47snR47 HSP12P22943 109 aaKnown RBP-3.39□□□□□ -2.95
snR47snR47 SNO1Q03144 224 aa-3.39□□□□□ -2.95
snR47snR47 RAD50P12753 1312 aa-3.4□□□□□ -2.95
snR47snR47 PGA2P53903 129 aa-3.4□□□□□ -2.95
snR47snR47 LSM3P57743 89 aaKnown RBP-3.4□□□□□ -2.95
snR47snR47 PET54P10834 293 aa-3.41□□□□□ -2.96
snR47snR47 YIL014C-AQ02598 104 aa-3.41□□□□□ -2.96
snR47snR47 YDR476CQ03362 224 aa-3.41□□□□□ -2.96
snR47snR47 MEC1P38111 2368 aa-3.42□□□□□ -2.96
snR47snR47 YGR201CP42936 225 aa-3.42□□□□□ -2.96
snR47snR47 EFG1Q3E705 233 aaKnown RBP-3.42□□□□□ -2.96
snR47snR47 YBL044WP38194 122 aa-3.44□□□□□ -2.96
snR47snR47 RPL38P49167 78 aaKnown RBP-3.44□□□□□ -2.96
snR47snR47 NSL1Q12143 216 aa-3.44□□□□□ -2.96
snR47snR47 DNA2P38859 1522 aa-3.44□□□□□ -2.96
snR47snR47 YRF1-1P0CX20 1796 aa-3.45□□□□□ -2.96
snR47snR47 YRF1-5P0CX21 1796 aa-3.45□□□□□ -2.96
snR47snR47 YRF1-8P0CX22 1796 aa-3.45□□□□□ -2.96
snR47snR47 CMD1P06787 147 aaKnown RBP-3.45□□□□□ -2.96
snR47snR47 BPH1P25356 2167 aa-3.46□□□□□ -2.96
snR47snR47 YLR050CQ12155 161 aaKnown RBP-3.46□□□□□ -2.96
snR47snR47 MIC10Q96VH5 97 aa-3.47□□□□□ -2.96
snR47snR47 INO80P53115 1489 aa-3.47□□□□□ -2.97
snR47snR47 IMP2P46972 177 aa-3.48□□□□□ -2.97
snR47snR47 AIM11P87275 137 aa-3.48□□□□□ -2.97
snR47snR47 HMRA2P0CY13 119 aa-3.49□□□□□ -2.97
snR47snR47 YCR101CP25607 182 aa-3.49□□□□□ -2.97
snR47snR47 APQ12P40532 138 aa-3.49□□□□□ -2.97
snR47snR47 YLR363W-AQ3E747 85 aa-3.49□□□□□ -2.97
snR47snR47 TRM732Q03496 1420 aa-3.5□□□□□ -2.97
snR47snR47 RPL14AP36105 138 aaKnown RBP-3.5□□□□□ -2.97
snR47snR47 PDX3P38075 228 aaKnown RBP-3.5□□□□□ -2.97
snR47snR47 RGI1P40043 161 aaPredicted RBP-3.5□□□□□ -2.97
snR47snR47 YJL197C-AP0C5P0 93 aa-3.51□□□□□ -2.97
snR47snR47 DER1P38307 211 aa-3.51□□□□□ -2.97
snR47snR47 TRS20P38334 175 aa-3.53□□□□□ -2.97
snR47snR47 YGR042WP53227 271 aa-3.53□□□□□ -2.97
snR47snR47 SLO1Q3E784 85 aa-3.53□□□□□ -2.97
snR47snR47 YKT6P36015 200 aaKnown RBP-3.54□□□□□ -2.98
snR47snR47 RSM18P40033 138 aa-3.54□□□□□ -2.98
snR47snR47 RPL35AP0CX84 120 aaKnown RBP-3.55□□□□□ -2.98
snR47snR47 RPL35BP0CX85 120 aaKnown RBP-3.55□□□□□ -2.98
snR47snR47 YPL038W-AQ3E7B4 63 aa-3.55□□□□□ -2.98
snR47snR47 BUD4P47136 1447 aa-3.55□□□□□ -2.98
snR47snR47 ROX3P25046 220 aa-3.56□□□□□ -2.98
snR47snR47 YPR202WQ08993 238 aa-3.56□□□□□ -2.98
snR47snR47 RPO21P04050 1733 aaKnown RBP-3.56□□□□□ -2.98
snR47snR47 YCR050CP25630 102 aa-3.57□□□□□ -2.98
snR47snR47 SSN2P38931 1420 aa-3.57□□□□□ -2.98
snR47snR47 YDR210WQ03482 75 aa-3.57□□□□□ -2.98
snR47snR47 ERV14P53173 138 aa-3.58□□□□□ -2.98
snR47snR47 JIP3O13555 125 aa-3.59□□□□□ -2.98
snR47snR47 YER187WP40102 141 aa-3.6□□□□□ -2.99
snR47snR47 MIX14Q04341 121 aa-3.6□□□□□ -2.99
snR47snR47 PCC1Q3E833 88 aa-3.6□□□□□ -2.99
snR47snR47 SUI1P32911 108 aaKnown RBP-3.61□□□□□ -2.99
snR47snR47 PAU12P53343 120 aa-3.61□□□□□ -2.99
snR47snR47 MRX7P53869 86 aa-3.61□□□□□ -2.99
Retrieved 100 of 5,963 RNA–protein pairs in 53.7 ms