RNA–Protein interactions for RNA: YPR025C

CCL1, Transcript of Cyclin associated with protein kinase Kin28p, yeastyeast

Gene CCL1, Length 1,182 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CCL1YPR025C URB1P34241 1764 aaKnown RBP1.21□□□□□ -2.22
CCL1YPR025C YJL197C-AP0C5P0 93 aa1.21□□□□□ -2.22
CCL1YPR025C YER039C-AP0CD97 72 aa1.21□□□□□ -2.22
CCL1YPR025C EMP24P32803 203 aaKnown RBP1.21□□□□□ -2.22
CCL1YPR025C YHR130CP38834 111 aa1.21□□□□□ -2.22
CCL1YPR025C PAU12P53343 120 aa1.21□□□□□ -2.22
CCL1YPR025C IRC21Q04772 201 aa1.21□□□□□ -2.22
CCL1YPR025C RPL36BO14455 100 aaKnown RBP1.2□□□□□ -2.22
CCL1YPR025C RPL36AP05745 100 aaPredicted RBP1.2□□□□□ -2.22
CCL1YPR025C PFY1P07274 126 aa1.2□□□□□ -2.22
CCL1YPR025C YCR099CP25657 155 aa1.2□□□□□ -2.22
CCL1YPR025C PAM16P42949 149 aa1.2□□□□□ -2.22
CCL1YPR025C YIL014C-AQ02598 104 aa1.2□□□□□ -2.22
CCL1YPR025C FCF2Q12035 217 aaPredicted RBP1.2□□□□□ -2.22
CCL1YPR025C YSF3P0C074 85 aaPredicted RBP1.19□□□□□ -2.22
CCL1YPR025C YER137CP40083 148 aaKnown RBP1.19□□□□□ -2.22
CCL1YPR025C MGR2Q02889 113 aa1.19□□□□□ -2.22
CCL1YPR025C HPA2Q06592 156 aa1.19□□□□□ -2.22
CCL1YPR025C RTR2Q12378 196 aa1.19□□□□□ -2.22
CCL1YPR025C DNA2P38859 1522 aa1.19□□□□□ -2.22
CCL1YPR025C YER187WP40102 141 aa1.18□□□□□ -2.22
CCL1YPR025C YJL009WP47078 108 aa1.18□□□□□ -2.22
CCL1YPR025C YOR072WQ08486 104 aa1.18□□□□□ -2.22
CCL1YPR025C YPL261CQ08976 102 aa1.18□□□□□ -2.22
CCL1YPR025C OST5Q92316 86 aa1.18□□□□□ -2.22
CCL1YPR025C RPS22AP0C0W1 130 aaKnown RBP1.17□□□□□ -2.22
CCL1YPR025C YBR013CP38215 129 aa1.17□□□□□ -2.22
CCL1YPR025C RPS22BQ3E7Y3 130 aaKnown RBP1.17□□□□□ -2.22
CCL1YPR025C YRF1-6P53819 1859 aa1.16□□□□□ -2.22
CCL1YPR025C YIL163CP40448 117 aa1.16□□□□□ -2.22
CCL1YPR025C PAU2P32612 120 aa1.15□□□□□ -2.23
CCL1YPR025C SRX1P36077 127 aa1.15□□□□□ -2.23
CCL1YPR025C COX23P38824 151 aa1.15□□□□□ -2.23
CCL1YPR025C HHY1P39982 102 aa1.15□□□□□ -2.23
CCL1YPR025C MIC27P50945 234 aa1.15□□□□□ -2.23
CCL1YPR025C FIT3Q08907 204 aa1.15□□□□□ -2.23
CCL1YPR025C PCC1Q3E833 88 aa1.15□□□□□ -2.23
CCL1YPR025C YLR365WQ7LIF2 110 aa1.15□□□□□ -2.23
CCL1YPR025C SEC7P11075 2009 aaKnown RBP1.15□□□□□ -2.23
CCL1YPR025C PAU24P38155 120 aa1.14□□□□□ -2.23
CCL1YPR025C YIR020CP40575 100 aa1.14□□□□□ -2.23
CCL1YPR025C BUD4P47136 1447 aa1.14□□□□□ -2.23
CCL1YPR025C RPL22AP05749 121 aaKnown RBP1.13□□□□□ -2.23
CCL1YPR025C POR2P40478 281 aa1.13□□□□□ -2.23
CCL1YPR025C RPL22BP56628 122 aaKnown RBP1.13□□□□□ -2.23
CCL1YPR025C DAD1Q12248 94 aa1.13□□□□□ -2.23
CCL1YPR025C OCA6Q12454 224 aa1.13□□□□□ -2.23
CCL1YPR025C MED11Q99278 115 aa1.13□□□□□ -2.23
CCL1YPR025C TSC11P40061 1430 aa1.13□□□□□ -2.23
CCL1YPR025C MVB12P42939 101 aa1.12□□□□□ -2.23
CCL1YPR025C RPS12P48589 143 aaKnown RBP1.12□□□□□ -2.23
CCL1YPR025C ENV10Q99382 181 aa1.12□□□□□ -2.23
CCL1YPR025C MYO1P08964 1928 aa1.12□□□□□ -2.23
CCL1YPR025C YEA6P39953 335 aa1.11□□□□□ -2.23
CCL1YPR025C CYB5P40312 120 aa1.11□□□□□ -2.23
CCL1YPR025C GNA1P43577 159 aaPredicted RBP1.11□□□□□ -2.23
CCL1YPR025C SNN1P48232 102 aa1.11□□□□□ -2.23
CCL1YPR025C YLR285C-AQ3E771 56 aa1.11□□□□□ -2.23
CCL1YPR025C COA6Q3E846 104 aa1.11□□□□□ -2.23
CCL1YPR025C HUG1Q6Q5K6 68 aa1.11□□□□□ -2.23
CCL1YPR025C YHR213W-BQ8TGK1 99 aa1.11□□□□□ -2.23
CCL1YPR025C PDR11P40550 1411 aa1.1□□□□□ -2.23
CCL1YPR025C PAU19P0CE85 124 aa1.1□□□□□ -2.23
CCL1YPR025C PAU3P25610 124 aa1.1□□□□□ -2.23
CCL1YPR025C RGI1P40043 161 aaPredicted RBP1.1□□□□□ -2.23
CCL1YPR025C YPK9Q12697 1472 aa1.1□□□□□ -2.23
CCL1YPR025C LYS2P07702 1392 aa1.09□□□□□ -2.23
CCL1YPR025C HMRA2P0CY13 119 aa1.09□□□□□ -2.23
CCL1YPR025C MRPL31P14063 131 aaPredicted RBP1.09□□□□□ -2.23
CCL1YPR025C BUD23P25627 275 aaPredicted RBP1.09□□□□□ -2.23
CCL1YPR025C YMR141CP40211 102 aa1.09□□□□□ -2.23
CCL1YPR025C GTT1P40582 234 aa1.09□□□□□ -2.23
CCL1YPR025C YGR164WP53291 111 aa1.09□□□□□ -2.23
CCL1YPR025C YGR240C-AQ3E786 66 aa1.09□□□□□ -2.23
CCL1YPR025C TY3B-IQ7LHG5 1498 aaKnown RBP1.09□□□□□ -2.24
CCL1YPR025C SEC16P48415 2195 aaKnown RBP1.08□□□□□ -2.24
CCL1YPR025C HUR1P45820 110 aa1.08□□□□□ -2.24
CCL1YPR025C ICS3P47034 131 aa1.08□□□□□ -2.24
CCL1YPR025C MRPS12P53732 153 aa1.07□□□□□ -2.24
CCL1YPR025C YMR103CQ04436 120 aa1.07□□□□□ -2.24
CCL1YPR025C YLR363W-AQ3E747 85 aa1.07□□□□□ -2.24
CCL1YPR025C YGL041C-BQ3E750 60 aa1.07□□□□□ -2.24
CCL1YPR025C YLR419WQ06698 1435 aaKnown RBP1.06□□□□□ -2.24
CCL1YPR025C VPS55P47111 140 aa1.06□□□□□ -2.24
CCL1YPR025C FYV7Q12247 151 aa1.06□□□□□ -2.24
CCL1YPR025C MIC10Q96VH5 97 aa1.06□□□□□ -2.24
CCL1YPR025C KRE5P22023 1365 aa1.06□□□□□ -2.24
CCL1YPR025C UBC5P15732 148 aa1.05□□□□□ -2.24
CCL1YPR025C YBR090CP38253 122 aa1.05□□□□□ -2.24
CCL1YPR025C VMA21P41806 77 aa1.05□□□□□ -2.24
CCL1YPR025C URA2P07259 2214 aaKnown RBP1.05□□□□□ -2.24
CCL1YPR025C BPT1P14772 1559 aa1.04□□□□□ -2.24
CCL1YPR025C RPA190P10964 1664 aaKnown RBP1.04□□□□□ -2.24
CCL1YPR025C YCR101CP25607 182 aa1.04□□□□□ -2.24
CCL1YPR025C PAU16P35994 123 aa1.04□□□□□ -2.24
CCL1YPR025C PAU15P40585 124 aa1.04□□□□□ -2.24
CCL1YPR025C LCL1Q02786 101 aa1.04□□□□□ -2.24
CCL1YPR025C SWC7Q06707 132 aa1.04□□□□□ -2.24
CCL1YPR025C BNI1P41832 1953 aa1.04□□□□□ -2.24
CCL1YPR025C RPL43AP0CX25 92 aaKnown RBP1.03□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 62.1 ms