RNA–Protein interactions for RNA: YPR002W

PDH1, Transcript of Putative 2-methylcitrate dehydratase, yeastyeast

Gene PDH1, Length 1,551 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PDH1YPR002W UTP23Q12339 254 aaKnown RBP4.34□□□□□ -1.71
PDH1YPR002W ECM14P38836 430 aa4.33□□□□□ -1.72
PDH1YPR002W SUR7P54003 302 aa4.33□□□□□ -1.72
PDH1YPR002W GPI19Q04082 140 aa4.33□□□□□ -1.72
PDH1YPR002W YMR103CQ04436 120 aa4.33□□□□□ -1.72
PDH1YPR002W SCW10Q04951 389 aa4.33□□□□□ -1.72
PDH1YPR002W FCF1Q05498 189 aaPredicted RBP4.33□□□□□ -1.72
PDH1YPR002W SNA4Q07549 140 aa4.33□□□□□ -1.72
PDH1YPR002W AQY1P0CD91 305 aa4.32□□□□□ -1.72
PDH1YPR002W HYP2P23301 157 aaKnown RBP4.32□□□□□ -1.72
PDH1YPR002W DAL80P26343 269 aa4.32□□□□□ -1.72
PDH1YPR002W CMC1P36064 111 aa4.32□□□□□ -1.72
PDH1YPR002W GPI18P38211 433 aa4.32□□□□□ -1.72
PDH1YPR002W SNF11P38956 169 aa4.32□□□□□ -1.72
PDH1YPR002W MST28P39552 234 aa4.32□□□□□ -1.72
PDH1YPR002W ADH6Q04894 360 aaKnown RBP4.32□□□□□ -1.72
PDH1YPR002W GEP3Q08622 556 aa4.32□□□□□ -1.72
PDH1YPR002W YPL257WQ08974 193 aa4.32□□□□□ -1.72
PDH1YPR002W TRA1P38811 3744 aa4.32□□□□□ -1.72
PDH1YPR002W SPI1P40092 148 aa4.31□□□□□ -1.72
PDH1YPR002W YPL073CP40323 161 aa4.31□□□□□ -1.72
PDH1YPR002W SGN1P40561 250 aaKnown RBP RIP-Chip data4.31□□□□□ -1.72not detected
PDH1YPR002W SLO1Q3E784 85 aa4.31□□□□□ -1.72
PDH1YPR002W BPH1P25356 2167 aa4.31□□□□□ -1.72
PDH1YPR002W ADH1P00330 348 aaKnown RBP4.31□□□□□ -1.72
PDH1YPR002W PFY1P07274 126 aa4.31□□□□□ -1.72
PDH1YPR002W YKR041WP36134 250 aa4.31□□□□□ -1.72
PDH1YPR002W YEL067CP39978 195 aa4.31□□□□□ -1.72
PDH1YPR002W YER076CP40049 302 aa4.31□□□□□ -1.72
PDH1YPR002W YIP1P53039 248 aa4.31□□□□□ -1.72
PDH1YPR002W RPL15BP54780 204 aaPredicted RBP4.31□□□□□ -1.72
PDH1YPR002W IRC23Q08416 157 aa4.31□□□□□ -1.72
PDH1YPR002W YDL009CQ12210 107 aa4.31□□□□□ -1.72
PDH1YPR002W YHR140WP38842 239 aa4.3□□□□□ -1.72
PDH1YPR002W MST27P53176 234 aa4.3□□□□□ -1.72
PDH1YPR002W TIM22Q12328 207 aa4.3□□□□□ -1.72
PDH1YPR002W YDL022C-AP0C5L6 82 aa4.29□□□□□ -1.72
PDH1YPR002W YKL070WP36087 169 aa4.29□□□□□ -1.72
PDH1YPR002W TOS6P48560 102 aa4.29□□□□□ -1.72
PDH1YPR002W PBP4Q07362 185 aaKnown RBP4.29□□□□□ -1.72
PDH1YPR002W MSA1Q08471 629 aa4.29□□□□□ -1.72
PDH1YPR002W COA3Q3E7B2 85 aa4.29□□□□□ -1.72
PDH1YPR002W IES6P32617 166 aa4.28□□□□□ -1.72
PDH1YPR002W SNU13P39990 126 aaKnown RBP4.28□□□□□ -1.72
PDH1YPR002W WWM1P43582 211 aaKnown RBP4.28□□□□□ -1.72
PDH1YPR002W YNR077CP53758 84 aa4.28□□□□□ -1.72
PDH1YPR002W ELC1Q03071 99 aa4.28□□□□□ -1.72
PDH1YPR002W YOL160WQ08321 113 aa4.28□□□□□ -1.72
PDH1YPR002W FCY1Q12178 158 aa4.28□□□□□ -1.72
PDH1YPR002W JID1Q12350 301 aa4.28□□□□□ -1.72
PDH1YPR002W YCL048W-AQ2V2Q2 79 aa4.28□□□□□ -1.72
PDH1YPR002W AGA1P32323 725 aa4.27□□□□□ -1.73
PDH1YPR002W MRPL38P35996 138 aaPredicted RBP4.27□□□□□ -1.73
PDH1YPR002W UBC7Q02159 165 aa4.27□□□□□ -1.73
PDH1YPR002W PRM3Q08931 133 aa4.27□□□□□ -1.73
PDH1YPR002W MSL5Q12186 476 aaKnown RBP RIP-Chip data4.27□□□□□ -1.73not detected
PDH1YPR002W LCB3P47013 409 aa4.27□□□□□ -1.73
PDH1YPR002W YGR219WP53307 113 aa4.27□□□□□ -1.73
PDH1YPR002W ATP23P53722 227 aa4.27□□□□□ -1.73
PDH1YPR002W HMRA2P0CY13 119 aa4.26□□□□□ -1.73
PDH1YPR002W YER121WP40076 114 aa4.26□□□□□ -1.73
PDH1YPR002W KTI12P34253 313 aaKnown RBP4.25□□□□□ -1.73
PDH1YPR002W YPT53P36019 220 aa4.25□□□□□ -1.73
PDH1YPR002W OXA1P39952 402 aa4.25□□□□□ -1.73
PDH1YPR002W POR2P40478 281 aa4.25□□□□□ -1.73
PDH1YPR002W YGR025WP53216 100 aa4.25□□□□□ -1.73
PDH1YPR002W YOR097CQ12274 175 aaPredicted RBP4.25□□□□□ -1.73
PDH1YPR002W GCN1P33892 2672 aaKnown RBP4.25□□□□□ -1.73
PDH1YPR002W RPL32P38061 130 aaKnown RBP4.24□□□□□ -1.73
PDH1YPR002W YER181CP40097 107 aa4.24□□□□□ -1.73
PDH1YPR002W MRPL49P40858 161 aaPredicted RBP4.24□□□□□ -1.73
PDH1YPR002W YML122CQ03207 126 aa4.24□□□□□ -1.73
PDH1YPR002W YPL261CQ08976 102 aa4.24□□□□□ -1.73
PDH1YPR002W VTC1P40046 129 aaRIP-Chip data4.23□□□□□ -1.73not detected
PDH1YPR002W YFR057WP43625 151 aa4.23□□□□□ -1.73
PDH1YPR002W DIA1P54005 336 aa4.23□□□□□ -1.73
PDH1YPR002W MIC12P38341 106 aa4.23□□□□□ -1.73
PDH1YPR002W YNL217WP40152 326 aa4.23□□□□□ -1.73
PDH1YPR002W BNA1P47096 177 aa4.23□□□□□ -1.73
PDH1YPR002W COX17Q12287 69 aa4.23□□□□□ -1.73
PDH1YPR002W RPS8AP0CX39 200 aaKnown RBP4.22□□□□□ -1.73
PDH1YPR002W RPS8BP0CX40 200 aaKnown RBP4.22□□□□□ -1.73
PDH1YPR002W OST2P46964 130 aa4.22□□□□□ -1.73
PDH1YPR002W GLO1P50107 326 aa4.22□□□□□ -1.73
PDH1YPR002W MRPL23Q12487 163 aaPredicted RBP4.22□□□□□ -1.73
PDH1YPR002W IGO2Q9P305 131 aa4.22□□□□□ -1.73
PDH1YPR002W NHP2P32495 156 aaPredicted RBP4.21□□□□□ -1.74
PDH1YPR002W YHR022CP38763 256 aa4.21□□□□□ -1.74
PDH1YPR002W AIM11P87275 137 aa4.21□□□□□ -1.74
PDH1YPR002W YMR181CQ03231 154 aa4.21□□□□□ -1.74
PDH1YPR002W LSM6Q06406 86 aaKnown RBP4.21□□□□□ -1.74
PDH1YPR002W RPL42AP0CX27 106 aaKnown RBP4.2□□□□□ -1.74
PDH1YPR002W RPL42BP0CX28 106 aaKnown RBP4.2□□□□□ -1.74
PDH1YPR002W YPL278CQ08990 100 aa4.2□□□□□ -1.74
PDH1YPR002W CCW12Q12127 133 aa4.2□□□□□ -1.74
PDH1YPR002W YBR200W-AQ3E755 54 aa4.2□□□□□ -1.74
PDH1YPR002W YOR008C-AQ3E7B9 74 aa4.2□□□□□ -1.74
PDH1YPR002W VAR1P02381 398 aa4.19□□□□□ -1.74
PDH1YPR002W PHO85P17157 305 aa4.19□□□□□ -1.74
PDH1YPR002W COX10P21592 462 aa4.19□□□□□ -1.74
Retrieved 100 of 5,963 RNA–protein pairs in 66.2 ms