RNA–Protein interactions for RNA: YPL089C

RLM1, Transcript of MADS-box transcription factor, yeast

Gene RLM1, Length 2,031 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RLM1	YPL089C	HPA2	Q06592	156 aa		0.68	□□□□□ -2.3
RLM1	YPL089C	YLR042C	Q07990	161 aa		0.68	□□□□□ -2.3
RLM1	YPL089C	FCF2	Q12035	217 aa	Predicted RBP	0.68	□□□□□ -2.3
RLM1	YPL089C	YOR097C	Q12274	175 aa	Predicted RBP	0.68	□□□□□ -2.3
RLM1	YPL089C	YIR021W-A	Q3E739	70 aa		0.68	□□□□□ -2.3
RLM1	YPL089C	MYO2	P19524	1574 aa	Known RBP	0.68	□□□□□ -2.3
RLM1	YPL089C	YCR099C	P25657	155 aa		0.67	□□□□□ -2.3
RLM1	YPL089C	MIC27	P50945	234 aa		0.67	□□□□□ -2.3
RLM1	YPL089C	RPL37B	P51402	88 aa	Known RBP	0.67	□□□□□ -2.3
RLM1	YPL089C	YIL014C-A	Q02598	104 aa		0.67	□□□□□ -2.3
RLM1	YPL089C	YLR194C	Q05777	254 aa		0.67	□□□□□ -2.3
RLM1	YPL089C	ATG2	P53855	1592 aa		0.67	□□□□□ -2.3
RLM1	YPL089C	YOR304C-A	O14468	76 aa		0.67	□□□□□ -2.3
RLM1	YPL089C	ADK1	P07170	222 aa	Known RBP	0.67	□□□□□ -2.3
RLM1	YPL089C	YBR013C	P38215	129 aa		0.67	□□□□□ -2.3
RLM1	YPL089C	YIL163C	P40448	117 aa		0.67	□□□□□ -2.3
RLM1	YPL089C	PAM16	P42949	149 aa		0.67	□□□□□ -2.3
RLM1	YPL089C	PAU12	P53343	120 aa		0.67	□□□□□ -2.3
RLM1	YPL089C	HIR3	P47171	1648 aa		0.67	□□□□□ -2.3
RLM1	YPL089C	TY1B-BR	Q12193	1756 aa		0.66	□□□□□ -2.3
RLM1	YPL089C	TY1B-GR3	Q12316	1755 aa		0.66	□□□□□ -2.3
RLM1	YPL089C	TY1B-OR	Q92393	1755 aa		0.66	□□□□□ -2.3
RLM1	YPL089C	SSK2	P53599	1579 aa		0.66	□□□□□ -2.3
RLM1	YPL089C	YHR130C	P38834	111 aa		0.66	□□□□□ -2.3
RLM1	YPL089C	YAR029W	P39549	74 aa		0.66	□□□□□ -2.3
RLM1	YPL089C	TDA2	P40045	126 aa		0.66	□□□□□ -2.3
RLM1	YPL089C	FIT3	Q08907	204 aa		0.66	□□□□□ -2.3
RLM1	YPL089C	YHR213W-B	Q8TGK1	99 aa		0.66	□□□□□ -2.3
RLM1	YPL089C	MED11	Q99278	115 aa		0.66	□□□□□ -2.3
RLM1	YPL089C	TRM732	Q03496	1420 aa		0.66	□□□□□ -2.3
RLM1	YPL089C	BPT1	P14772	1559 aa		0.66	□□□□□ -2.3
RLM1	YPL089C	GSC2	P40989	1895 aa		0.66	□□□□□ -2.3
RLM1	YPL089C	YJL197C-A	P0C5P0	93 aa		0.65	□□□□□ -2.3
RLM1	YPL089C	EMP24	P32803	203 aa	Known RBP	0.65	□□□□□ -2.3
RLM1	YPL089C	ARL3	Q02804	198 aa		0.65	□□□□□ -2.3
RLM1	YPL089C	YPL261C	Q08976	102 aa		0.65	□□□□□ -2.3
RLM1	YPL089C	COA6	Q3E846	104 aa		0.65	□□□□□ -2.3
RLM1	YPL089C	BUD4	P47136	1447 aa		0.65	□□□□□ -2.3
RLM1	YPL089C	ECM5	Q03214	1411 aa		0.65	□□□□□ -2.3
RLM1	YPL089C	SPT6	P23615	1451 aa	Known RBP	0.65	□□□□□ -2.3
RLM1	YPL089C	YCF1	P39109	1515 aa	Known RBP	0.65	□□□□□ -2.3
RLM1	YPL089C	RPA190	P10964	1664 aa	Known RBP	0.65	□□□□□ -2.31
RLM1	YPL089C	MVB12	P42939	101 aa		0.65	□□□□□ -2.31
RLM1	YPL089C	HUG1	Q6Q5K6	68 aa		0.65	□□□□□ -2.31
RLM1	YPL089C	OST5	Q92316	86 aa		0.65	□□□□□ -2.31
RLM1	YPL089C	CDC25	P04821	1589 aa		0.65	□□□□□ -2.31
RLM1	YPL089C	DNF1	P32660	1571 aa		0.65	□□□□□ -2.31
RLM1	YPL089C	ESC1	Q03661	1658 aa	Known RBP	0.65	□□□□□ -2.31
RLM1	YPL089C	TY2B-LR1	P0C2J3	1770 aa		0.65	□□□□□ -2.31
RLM1	YPL089C	TY2B-F	P0CX63	1770 aa		0.65	□□□□□ -2.31
RLM1	YPL089C	TY2B-GR2	P0CX64	1770 aa		0.65	□□□□□ -2.31
RLM1	YPL089C	TY2B-C	P25384	1770 aa		0.65	□□□□□ -2.31
RLM1	YPL089C	TY2B-DR2	Q03494	1770 aa		0.65	□□□□□ -2.31
RLM1	YPL089C	TY1B-DR1	Q03855	1755 aa		0.65	□□□□□ -2.31
RLM1	YPL089C	TY2B-DR3	Q07791	1770 aa	Known RBP	0.65	□□□□□ -2.31
RLM1	YPL089C	TY2B-OR1	Q12113	1770 aa		0.65	□□□□□ -2.31
RLM1	YPL089C	TY2B-DR1	Q12472	1770 aa		0.65	□□□□□ -2.31
RLM1	YPL089C	TY2B-OR2	Q12501	1770 aa		0.65	□□□□□ -2.31
RLM1	YPL089C	TY1B-H	O13535	1793 aa		0.64	□□□□□ -2.31
RLM1	YPL089C	RPL22A	P05749	121 aa	Known RBP	0.64	□□□□□ -2.31
RLM1	YPL089C	TY1B-DR5	P0C2I2	1755 aa		0.64	□□□□□ -2.31
RLM1	YPL089C	TY1B-DR6	P0C2I3	1755 aa		0.64	□□□□□ -2.31
RLM1	YPL089C	TY1B-LR2	P0C2I5	1755 aa		0.64	□□□□□ -2.31
RLM1	YPL089C	TY1B-LR3	P0C2I6	1755 aa	Known RBP	0.64	□□□□□ -2.31
RLM1	YPL089C	TY1B-PR1	P0C2I9	1755 aa	Known RBP	0.64	□□□□□ -2.31
RLM1	YPL089C	TY1B-PR2	P0C2J0	1756 aa		0.64	□□□□□ -2.31
RLM1	YPL089C	TY1B-PR3	P0C2J1	1755 aa	Known RBP	0.64	□□□□□ -2.31
RLM1	YPL089C	YRF1-1	P0CX20	1796 aa		0.64	□□□□□ -2.31
RLM1	YPL089C	YRF1-5	P0CX21	1796 aa		0.64	□□□□□ -2.31
RLM1	YPL089C	YRF1-8	P0CX22	1796 aa		0.64	□□□□□ -2.31
RLM1	YPL089C	COX23	P38824	151 aa		0.64	□□□□□ -2.31
RLM1	YPL089C	TY1B-JR1	P47098	1755 aa		0.64	□□□□□ -2.31
RLM1	YPL089C	TY1B-ML2	Q03434	1755 aa	Known RBP	0.64	□□□□□ -2.31
RLM1	YPL089C	TY1B-ER1	Q03612	1755 aa		0.64	□□□□□ -2.31
RLM1	YPL089C	TY1B-ML1	Q04711	1755 aa	Known RBP	0.64	□□□□□ -2.31
RLM1	YPL089C	TY1B-GR2	Q12269	1755 aa		0.64	□□□□□ -2.31
RLM1	YPL089C	TY1B-OL	Q12273	1755 aa		0.64	□□□□□ -2.31
RLM1	YPL089C	RTR2	Q12378	196 aa		0.64	□□□□□ -2.31
RLM1	YPL089C	TY1B-PL	Q12414	1755 aa	Known RBP	0.64	□□□□□ -2.31
RLM1	YPL089C	DNF2	Q12675	1612 aa		0.64	□□□□□ -2.31
RLM1	YPL089C	YOR093C	Q12275	1648 aa		0.64	□□□□□ -2.31
RLM1	YPL089C	YER188C-A	P0C0V2	99 aa		0.64	□□□□□ -2.31
RLM1	YPL089C	YER039C-A	P0CD97	72 aa		0.64	□□□□□ -2.31
RLM1	YPL089C	YER187W	P40102	141 aa		0.64	□□□□□ -2.31
RLM1	YPL089C	POR2	P40478	281 aa		0.64	□□□□□ -2.31
RLM1	YPL089C	RPL22B	P56628	122 aa	Known RBP	0.64	□□□□□ -2.31
RLM1	YPL089C	RUB1	Q03919	77 aa		0.64	□□□□□ -2.31
RLM1	YPL089C	YLR285C-A	Q3E771	56 aa		0.64	□□□□□ -2.31
RLM1	YPL089C	PCC1	Q3E833	88 aa		0.64	□□□□□ -2.31
RLM1	YPL089C	YLR365W	Q7LIF2	110 aa		0.64	□□□□□ -2.31
RLM1	YPL089C	TY2B-B	Q12491	1770 aa		0.63	□□□□□ -2.31
RLM1	YPL089C	RPO31	P04051	1460 aa		0.63	□□□□□ -2.31
RLM1	YPL089C	MRPL31	P14063	131 aa	Predicted RBP	0.63	□□□□□ -2.31
RLM1	YPL089C	PAU2	P32612	120 aa		0.63	□□□□□ -2.31
RLM1	YPL089C	PAU24	P38155	120 aa		0.63	□□□□□ -2.31
RLM1	YPL089C	YMR141C	P40211	102 aa		0.63	□□□□□ -2.31
RLM1	YPL089C	YIR020C	P40575	100 aa		0.63	□□□□□ -2.31
RLM1	YPL089C	DAD1	Q12248	94 aa		0.63	□□□□□ -2.31
RLM1	YPL089C	ENV10	Q99382	181 aa		0.63	□□□□□ -2.31
RLM1	YPL089C	TY1B-DR3	Q99231	1755 aa		0.63	□□□□□ -2.31

Retrieved 100 of 5,963 RNA–protein pairs in 19.9 ms