RNA–Protein interactions for RNA: YPL065W

VPS28, Transcript of Component of the ESCRT-I complex, yeastyeast

Gene VPS28, Length 729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS28YPL065W NKP2Q06162 153 aa1.03□□□□□ -2.24
VPS28YPL065W YJL197C-AP0C5P0 93 aa1.02□□□□□ -2.25
VPS28YPL065W RAD50P12753 1312 aa1.02□□□□□ -2.25
VPS28YPL065W YIL014C-AQ02598 104 aa1.02□□□□□ -2.25
VPS28YPL065W GPI19Q04082 140 aa1.02□□□□□ -2.25
VPS28YPL065W MRP49P32388 137 aa1.01□□□□□ -2.25
VPS28YPL065W EMP24P32803 203 aaKnown RBP1.01□□□□□ -2.25
VPS28YPL065W TY1B-HO13535 1793 aa1.01□□□□□ -2.25
VPS28YPL065W SRX1P36077 127 aa1□□□□□ -2.25
VPS28YPL065W POR2P40478 281 aa1□□□□□ -2.25
VPS28YPL065W SNF11P38956 169 aa0.99□□□□□ -2.25
VPS28YPL065W ENV10Q99382 181 aa0.99□□□□□ -2.25
VPS28YPL065W RPL22AP05749 121 aaKnown RBP0.98□□□□□ -2.25
VPS28YPL065W ICS3P47034 131 aa0.98□□□□□ -2.25
VPS28YPL065W YJR128WP47162 119 aa0.98□□□□□ -2.25
VPS28YPL065W MYO2P19524 1574 aaKnown RBP0.97□□□□□ -2.25
VPS28YPL065W PAU12P53343 120 aa0.97□□□□□ -2.25
VPS28YPL065W OCA6Q12454 224 aa0.96□□□□□ -2.26
VPS28YPL065W SLO1Q3E784 85 aa0.96□□□□□ -2.26
VPS28YPL065W YGR240C-AQ3E786 66 aa0.96□□□□□ -2.26
VPS28YPL065W LCL1Q02786 101 aa0.95□□□□□ -2.26
VPS28YPL065W YLR118CQ12354 227 aa0.95□□□□□ -2.26
VPS28YPL065W YFR035CP43608 114 aa0.94□□□□□ -2.26
VPS28YPL065W YLR099W-AQ3E798 87 aa0.94□□□□□ -2.26
VPS28YPL065W YHR130CP38834 111 aa0.92□□□□□ -2.26
VPS28YPL065W AIM11P87275 137 aa0.92□□□□□ -2.26
VPS28YPL065W YLR285C-AQ3E771 56 aa0.92□□□□□ -2.26
VPS28YPL065W OST5Q92316 86 aa0.92□□□□□ -2.26
VPS28YPL065W VMA7P39111 118 aa0.91□□□□□ -2.26
VPS28YPL065W SPC24Q04477 213 aa0.91□□□□□ -2.26
VPS28YPL065W YPL261CQ08976 102 aa0.91□□□□□ -2.26
VPS28YPL065W SEC16P48415 2195 aaKnown RBP0.91□□□□□ -2.26
VPS28YPL065W COX23P38824 151 aa0.9□□□□□ -2.27
VPS28YPL065W YGL041C-BQ3E750 60 aa0.9□□□□□ -2.27
VPS28YPL065W AUA1P32450 94 aa0.89□□□□□ -2.27
VPS28YPL065W CYB5P40312 120 aa0.89□□□□□ -2.27
VPS28YPL065W RPB11P38902 120 aa0.88□□□□□ -2.27
VPS28YPL065W BNI1P41832 1953 aa0.87□□□□□ -2.27
VPS28YPL065W TDA2P40045 126 aa0.87□□□□□ -2.27
VPS28YPL065W PCC1Q3E833 88 aa0.87□□□□□ -2.27
VPS28YPL065W YEA6P39953 335 aa0.86□□□□□ -2.27
VPS28YPL065W MRPS12P53732 153 aa0.86□□□□□ -2.27
VPS28YPL065W ARL3Q02804 198 aa0.86□□□□□ -2.27
VPS28YPL065W SNF2P22082 1703 aa0.85□□□□□ -2.27
VPS28YPL065W YER187WP40102 141 aa0.85□□□□□ -2.27
VPS28YPL065W YIR020CP40575 100 aa0.85□□□□□ -2.27
VPS28YPL065W RPL22BP56628 122 aaKnown RBP0.85□□□□□ -2.27
VPS28YPL065W FRQ1Q06389 190 aa0.85□□□□□ -2.27
VPS28YPL065W YOR097CQ12274 175 aaPredicted RBP0.85□□□□□ -2.27
VPS28YPL065W BLM10P43583 2143 aa0.85□□□□□ -2.27
VPS28YPL065W YCR099CP25657 155 aa0.84□□□□□ -2.27
VPS28YPL065W PAU24P38155 120 aa0.82□□□□□ -2.28
VPS28YPL065W YAR029WP39549 74 aa0.82□□□□□ -2.28
VPS28YPL065W VPS55P47111 140 aa0.82□□□□□ -2.28
VPS28YPL065W DNA2P38859 1522 aa0.82□□□□□ -2.28
VPS28YPL065W PAU2P32612 120 aa0.81□□□□□ -2.28
VPS28YPL065W SNN1P48232 102 aa0.81□□□□□ -2.28
VPS28YPL065W YPK9Q12697 1472 aa0.8□□□□□ -2.28
VPS28YPL065W YLR363W-AQ3E747 85 aa0.8□□□□□ -2.28
VPS28YPL065W SEC7P11075 2009 aaKnown RBP0.79□□□□□ -2.28
VPS28YPL065W BRR2P32639 2163 aaKnown RBP0.79□□□□□ -2.28
VPS28YPL065W YLR042CQ07990 161 aa0.79□□□□□ -2.28
VPS28YPL065W HMRA2P0CY13 119 aa0.78□□□□□ -2.28
VPS28YPL065W PAM16P42949 149 aa0.78□□□□□ -2.28
VPS28YPL065W DAD1Q12248 94 aa0.78□□□□□ -2.28
VPS28YPL065W WIP1Q2V2P8 89 aa0.77□□□□□ -2.29
VPS28YPL065W URB1P34241 1764 aaKnown RBP0.77□□□□□ -2.29
VPS28YPL065W ECM5Q03214 1411 aa0.76□□□□□ -2.29
VPS28YPL065W APS2Q00381 147 aa0.76□□□□□ -2.29
VPS28YPL065W ADK1P07170 222 aaKnown RBP0.75□□□□□ -2.29
VPS28YPL065W YLR365WQ7LIF2 110 aa0.74□□□□□ -2.29
VPS28YPL065W YDR010CQ12426 110 aa0.73□□□□□ -2.29
VPS28YPL065W PAU19P0CE85 124 aa0.72□□□□□ -2.29
VPS28YPL065W PAU3P25610 124 aa0.72□□□□□ -2.29
VPS28YPL065W RPS29BP41058 56 aaKnown RBP0.72□□□□□ -2.29
VPS28YPL065W YRF1-6P53819 1859 aa0.71□□□□□ -2.3
VPS28YPL065W YLR255CO13574 117 aa0.71□□□□□ -2.3
VPS28YPL065W GTT1P40582 234 aa0.71□□□□□ -2.3
VPS28YPL065W RTR2Q12378 196 aa0.7□□□□□ -2.3
VPS28YPL065W YIR021W-AQ3E739 70 aa0.69□□□□□ -2.3
VPS28YPL065W TY4B-HP0C2J7 1802 aa0.67□□□□□ -2.3
VPS28YPL065W RPO41P13433 1351 aaKnown RBP0.67□□□□□ -2.3
VPS28YPL065W YHR173CP38864 112 aa0.66□□□□□ -2.3
VPS28YPL065W YCL048W-AQ2V2Q2 79 aa0.66□□□□□ -2.3
VPS28YPL065W LSM6Q06406 86 aaKnown RBP0.65□□□□□ -2.31
VPS28YPL065W YBR072C-AQ3E794 53 aa0.65□□□□□ -2.31
VPS28YPL065W YOL164W-AQ3E7A5 60 aa0.65□□□□□ -2.31
VPS28YPL065W GCV3P39726 170 aaPredicted RBP0.64□□□□□ -2.31
VPS28YPL065W FAS2P19097 1887 aaKnown RBP0.63□□□□□ -2.31
VPS28YPL065W HUR1P45820 110 aa0.62□□□□□ -2.31
VPS28YPL065W YER039C-AP0CD97 72 aa0.61□□□□□ -2.31
VPS28YPL065W CCW14O13547 238 aa0.6□□□□□ -2.31
VPS28YPL065W PAU16P35994 123 aa0.6□□□□□ -2.31
VPS28YPL065W PAU15P40585 124 aa0.6□□□□□ -2.31
VPS28YPL065W POL2P21951 2222 aaKnown RBP0.6□□□□□ -2.31
VPS28YPL065W BUD23P25627 275 aaPredicted RBP0.59□□□□□ -2.31
VPS28YPL065W YIL086CP40503 102 aa0.59□□□□□ -2.31
VPS28YPL065W IMP2P46972 177 aa0.59□□□□□ -2.31
VPS28YPL065W YDR210WQ03482 75 aa0.59□□□□□ -2.31
VPS28YPL065W YOL118CQ08259 102 aa0.59□□□□□ -2.31
Retrieved 100 of 5,963 RNA–protein pairs in 37.1 ms