RNA–Protein interactions for RNA: YOR261C

RPN8, Transcript of Essential non-ATPase regulatory subunit of the 26S proteasome, yeast

Gene RPN8, Length 1,017 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
RPN8	YOR261C	RCF2	P53721	224 aa		1	□□□□□ -2.25
RPN8	YOR261C	COF1	Q03048	143 aa	Known RBP	1	□□□□□ -2.25
RPN8	YOR261C	FMN1	Q03778	218 aa		1	□□□□□ -2.25
RPN8	YOR261C	RRT7	Q07829	113 aa		1	□□□□□ -2.25
RPN8	YOR261C	LAA1	P39526	2014 aa		0.99	□□□□□ -2.25
RPN8	YOR261C	AIM18	P38884	321 aa		0.99	□□□□□ -2.25
RPN8	YOR261C	YEL014C	P39999	101 aa		0.99	□□□□□ -2.25
RPN8	YOR261C	YDR366C	P87287	132 aa		0.99	□□□□□ -2.25
RPN8	YOR261C	NMA1	Q06178	401 aa	Known RBP	0.99	□□□□□ -2.25
RPN8	YOR261C	IRC19	Q07843	230 aa		0.99	□□□□□ -2.25
RPN8	YOR261C	SCS22	Q6Q595	175 aa		0.99	□□□□□ -2.25
RPN8	YOR261C	TOM1	Q03280	3268 aa		0.98	□□□□□ -2.25
RPN8	YOR261C	YGL041W-A	P0C5N3	154 aa		0.98	□□□□□ -2.25
RPN8	YOR261C	HSP150	P32478	413 aa		0.98	□□□□□ -2.25
RPN8	YOR261C	SUI1	P32911	108 aa	Known RBP	0.98	□□□□□ -2.25
RPN8	YOR261C	TRS20	P38334	175 aa		0.98	□□□□□ -2.25
RPN8	YOR261C	YHR140W	P38842	239 aa		0.98	□□□□□ -2.25
RPN8	YOR261C	APS3	P47064	194 aa		0.98	□□□□□ -2.25
RPN8	YOR261C	YGL204C	P53089	101 aa		0.98	□□□□□ -2.25
RPN8	YOR261C	HHO1	P53551	258 aa		0.98	□□□□□ -2.25
RPN8	YOR261C	SPC3	Q12133	184 aa		0.98	□□□□□ -2.25
RPN8	YOR261C	COX5B	P00425	151 aa		0.97	□□□□□ -2.25
RPN8	YOR261C	IPT1	P38954	527 aa		0.97	□□□□□ -2.25
RPN8	YOR261C	SMX2	P40204	77 aa	Known RBP	0.97	□□□□□ -2.25
RPN8	YOR261C	ATP19	P81451	68 aa		0.97	□□□□□ -2.25
RPN8	YOR261C	TMA23	Q03525	211 aa		0.97	□□□□□ -2.25
RPN8	YOR261C	CSN9	Q03981	162 aa		0.97	□□□□□ -2.25
RPN8	YOR261C	LDB18	Q07887	179 aa		0.97	□□□□□ -2.25
RPN8	YOR261C	KIN28	P06242	306 aa		0.96	□□□□□ -2.26
RPN8	YOR261C	YCR001W	P25347	104 aa		0.96	□□□□□ -2.26
RPN8	YOR261C	GIM4	P40005	111 aa	Known RBP	0.96	□□□□□ -2.26
RPN8	YOR261C	GLC8	P41818	229 aa		0.96	□□□□□ -2.26
RPN8	YOR261C	YGR039W	P53225	103 aa		0.96	□□□□□ -2.26
RPN8	YOR261C	YGR042W	P53227	271 aa		0.96	□□□□□ -2.26
RPN8	YOR261C	SPC2	Q04969	178 aa		0.96	□□□□□ -2.26
RPN8	YOR261C	YDR278C	Q05612	105 aa		0.96	□□□□□ -2.26
RPN8	YOR261C	YPR153W	Q06537	140 aa		0.96	□□□□□ -2.26
RPN8	YOR261C	SWC7	Q06707	132 aa		0.96	□□□□□ -2.26
RPN8	YOR261C	VAM10	Q08474	114 aa		0.96	□□□□□ -2.26
RPN8	YOR261C	FCY1	Q12178	158 aa		0.96	□□□□□ -2.26
RPN8	YOR261C	GTT2	Q12390	233 aa		0.96	□□□□□ -2.26
RPN8	YOR261C	OCA6	Q12454	224 aa		0.96	□□□□□ -2.26
RPN8	YOR261C	YLR361C-A	Q3E795	98 aa		0.96	□□□□□ -2.26
RPN8	YOR261C	YKL068W-A	Q3E826	78 aa		0.96	□□□□□ -2.26
RPN8	YOR261C	ECM29	P38737	1868 aa		0.96	□□□□□ -2.26
RPN8	YOR261C	MOT1	P32333	1867 aa		0.95	□□□□□ -2.26
RPN8	YOR261C	NMT1	P14743	455 aa		0.95	□□□□□ -2.26
RPN8	YOR261C	RPS1B	P23248	255 aa	Known RBP	0.95	□□□□□ -2.26
RPN8	YOR261C	RPC19	P28000	142 aa	Known RBP	0.95	□□□□□ -2.26
RPN8	YOR261C	ECM31	P38122	312 aa		0.95	□□□□□ -2.26
RPN8	YOR261C	PHB1	P40961	287 aa		0.95	□□□□□ -2.26
RPN8	YOR261C	YCL001W-A	P87012	153 aa		0.95	□□□□□ -2.26
RPN8	YOR261C	NHP10	Q03435	203 aa		0.95	□□□□□ -2.26
RPN8	YOR261C	YDR034W-B	Q6Q5X2	51 aa		0.95	□□□□□ -2.26
RPN8	YOR261C	YOL013W-A	P0C272	63 aa	Predicted RBP	0.94	□□□□□ -2.26
RPN8	YOR261C	FYV5	P25585	152 aa		0.94	□□□□□ -2.26
RPN8	YOR261C	YCR099C	P25657	155 aa		0.94	□□□□□ -2.26
RPN8	YOR261C	RPS1A	P33442	255 aa	Known RBP	0.94	□□□□□ -2.26
RPN8	YOR261C	RPL14A	P36105	138 aa	Known RBP	0.94	□□□□□ -2.26
RPN8	YOR261C	YBR032W	P38223	100 aa		0.94	□□□□□ -2.26
RPN8	YOR261C	POP7	P38291	140 aa		0.94	□□□□□ -2.26
RPN8	YOR261C	RPL14B	P38754	138 aa	Known RBP	0.94	□□□□□ -2.26
RPN8	YOR261C	HPM1	P40481	377 aa		0.94	□□□□□ -2.26
RPN8	YOR261C	YNL019C	P53975	284 aa		0.94	□□□□□ -2.26
RPN8	YOR261C	GPI11	Q06636	219 aa		0.94	□□□□□ -2.26
RPN8	YOR261C	YOR385W	Q08909	290 aa		0.94	□□□□□ -2.26
RPN8	YOR261C	VPS13	Q07878	3144 aa		0.93	□□□□□ -2.26
RPN8	YOR261C	NHP6A	P11632	93 aa	Known RBP	0.93	□□□□□ -2.26
RPN8	YOR261C	SUA7	P29055	345 aa	Predicted RBP	0.93	□□□□□ -2.26
RPN8	YOR261C	SRX1	P36077	127 aa		0.93	□□□□□ -2.26
RPN8	YOR261C	YBR027C	P38220	110 aa		0.93	□□□□□ -2.26
RPN8	YOR261C	PRS3	P38689	320 aa	Known RBP	0.93	□□□□□ -2.26
RPN8	YOR261C	DIE2	P50076	525 aa		0.93	□□□□□ -2.26
RPN8	YOR261C	EMC4	P53073	190 aa		0.93	□□□□□ -2.26
RPN8	YOR261C	SPC24	Q04477	213 aa		0.93	□□□□□ -2.26
RPN8	YOR261C	SOM1	Q05676	74 aa		0.93	□□□□□ -2.26
RPN8	YOR261C	HUT1	Q12520	339 aa		0.93	□□□□□ -2.26
RPN8	YOR261C	HYM1	P32464	399 aa		0.92	□□□□□ -2.26
RPN8	YOR261C	RPS20	P38701	121 aa	Known RBP	0.92	□□□□□ -2.26
RPN8	YOR261C	LSM8	P47093	109 aa	Known RBP	0.92	□□□□□ -2.26
RPN8	YOR261C	YNL277W-A	Q3E7Z0	62 aa		0.92	□□□□□ -2.26
RPN8	YOR261C	HYP2	P23301	157 aa	Known RBP	0.91	□□□□□ -2.26
RPN8	YOR261C	YCR050C	P25630	102 aa		0.91	□□□□□ -2.26
RPN8	YOR261C	ATG8	P38182	117 aa	RIP-Chip data	0.91	□□□□□ -2.26	not detected
RPN8	YOR261C	RGI1	P40043	161 aa	Predicted RBP	0.91	□□□□□ -2.26
RPN8	YOR261C	SPG1	P50088	95 aa		0.91	□□□□□ -2.26
RPN8	YOR261C	ELC1	Q03071	99 aa		0.91	□□□□□ -2.26
RPN8	YOR261C	RAF1	Q06891	181 aa		0.91	□□□□□ -2.26
RPN8	YOR261C	YPL225W	Q08971	146 aa	Known RBP	0.91	□□□□□ -2.26
RPN8	YOR261C	YAL064W	P39711	94 aa		0.9	□□□□□ -2.27
RPN8	YOR261C	YIL086C	P40503	102 aa		0.9	□□□□□ -2.27
RPN8	YOR261C	SFT1	P43682	97 aa		0.9	□□□□□ -2.27
RPN8	YOR261C	RPS12	P48589	143 aa	Known RBP	0.9	□□□□□ -2.27
RPN8	YOR261C	VMA10	P48836	114 aa	Known RBP	0.9	□□□□□ -2.27
RPN8	YOR261C	SED1	Q01589	338 aa		0.9	□□□□□ -2.27
RPN8	YOR261C	DYN2	Q02647	92 aa		0.9	□□□□□ -2.27
RPN8	YOR261C	YKL018C-A	Q3E7A7	99 aa		0.9	□□□□□ -2.27
RPN8	YOR261C	MHF2	Q3E829	80 aa		0.9	□□□□□ -2.27
RPN8	YOR261C	RPL33A	P05744	107 aa	Known RBP	0.89	□□□□□ -2.27
RPN8	YOR261C	RPL40A	P0CH08	128 aa	Known RBP	0.89	□□□□□ -2.27

Retrieved 100 of 5,963 RNA–protein pairs in 27.8 ms