RNA–Protein interactions for RNA: YOR166C

SWT1, Transcript of RNA endoribonuclease involved in perinuclear mRNP quality control, yeast

Gene SWT1, Length 1,377 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SWT1	YOR166C	TDA2	P40045	126 aa		0.47	□□□□□ -2.33
SWT1	YOR166C	TSC11	P40061	1430 aa		0.47	□□□□□ -2.33
SWT1	YOR166C	LST8	P41318	303 aa		0.47	□□□□□ -2.33
SWT1	YOR166C	PAM16	P42949	149 aa		0.47	□□□□□ -2.33
SWT1	YOR166C	RPS12	P48589	143 aa	Known RBP	0.47	□□□□□ -2.33
SWT1	YOR166C	YMR122C	Q03879	124 aa		0.47	□□□□□ -2.33
SWT1	YOR166C	GPI19	Q04082	140 aa		0.47	□□□□□ -2.33
SWT1	YOR166C	SEN15	Q04675	128 aa		0.47	□□□□□ -2.33
SWT1	YOR166C	YLR296W	Q05898	108 aa		0.47	□□□□□ -2.33
SWT1	YOR166C	FIT3	Q08907	204 aa		0.47	□□□□□ -2.33
SWT1	YOR166C	BUD4	P47136	1447 aa		0.46	□□□□□ -2.34
SWT1	YOR166C	RPL36B	O14455	100 aa	Known RBP	0.46	□□□□□ -2.34
SWT1	YOR166C	RPL36A	P05745	100 aa	Predicted RBP	0.46	□□□□□ -2.34
SWT1	YOR166C	YJL197C-A	P0C5P0	93 aa		0.46	□□□□□ -2.34
SWT1	YOR166C	UTP11	P34247	250 aa	Predicted RBP	0.46	□□□□□ -2.34
SWT1	YOR166C	YHR130C	P38834	111 aa		0.46	□□□□□ -2.34
SWT1	YOR166C	AIM18	P38884	321 aa		0.46	□□□□□ -2.34
SWT1	YOR166C	YGR164W	P53291	111 aa		0.46	□□□□□ -2.34
SWT1	YOR166C	YPL261C	Q08976	102 aa		0.46	□□□□□ -2.34
SWT1	YOR166C	FYV7	Q12247	151 aa		0.46	□□□□□ -2.34
SWT1	YOR166C	OCA6	Q12454	224 aa		0.46	□□□□□ -2.34
SWT1	YOR166C	YLR365W	Q7LIF2	110 aa		0.46	□□□□□ -2.34
SWT1	YOR166C	OST5	Q92316	86 aa		0.46	□□□□□ -2.34
SWT1	YOR166C	MED11	Q99278	115 aa		0.46	□□□□□ -2.34
SWT1	YOR166C	TOP2	P06786	1428 aa	Known RBP	0.46	□□□□□ -2.34
SWT1	YOR166C	PDR11	P40550	1411 aa		0.46	□□□□□ -2.34
SWT1	YOR166C	RIF1	P29539	1916 aa		0.45	□□□□□ -2.34
SWT1	YOR166C	YBR090C	P38253	122 aa		0.45	□□□□□ -2.34
SWT1	YOR166C	AIM4	P38305	123 aa	Predicted RBP	0.45	□□□□□ -2.34
SWT1	YOR166C	YER187W	P40102	141 aa		0.45	□□□□□ -2.34
SWT1	YOR166C	GNA1	P43577	159 aa	Predicted RBP	0.45	□□□□□ -2.34
SWT1	YOR166C	YIL014C-A	Q02598	104 aa		0.45	□□□□□ -2.34
SWT1	YOR166C	YMR321C	Q04898	105 aa		0.45	□□□□□ -2.34
SWT1	YOR166C	YLR194C	Q05777	254 aa		0.45	□□□□□ -2.34
SWT1	YOR166C	COA4	Q05809	96 aa		0.45	□□□□□ -2.34
SWT1	YOR166C	HPA2	Q06592	156 aa		0.45	□□□□□ -2.34
SWT1	YOR166C	HFA1	P32874	2273 aa		0.45	□□□□□ -2.34
SWT1	YOR166C	TY3B-I	Q7LHG5	1498 aa	Known RBP	0.45	□□□□□ -2.34
SWT1	YOR166C	LYS2	P07702	1392 aa		0.45	□□□□□ -2.34
SWT1	YOR166C	TY1B-H	O13535	1793 aa		0.45	□□□□□ -2.34
SWT1	YOR166C	UBC5	P15732	148 aa		0.45	□□□□□ -2.34
SWT1	YOR166C	YCR101C	P25607	182 aa		0.45	□□□□□ -2.34
SWT1	YOR166C	SRX1	P36077	127 aa		0.45	□□□□□ -2.34
SWT1	YOR166C	YEA6	P39953	335 aa		0.45	□□□□□ -2.34
SWT1	YOR166C	YIR020C	P40575	100 aa		0.45	□□□□□ -2.34
SWT1	YOR166C	GTT1	P40582	234 aa		0.45	□□□□□ -2.34
SWT1	YOR166C	HUR1	P45820	110 aa		0.45	□□□□□ -2.34
SWT1	YOR166C	SNN1	P48232	102 aa		0.45	□□□□□ -2.34
SWT1	YOR166C	PAU12	P53343	120 aa		0.45	□□□□□ -2.34
SWT1	YOR166C	RPL22B	P56628	122 aa	Known RBP	0.45	□□□□□ -2.34
SWT1	YOR166C	YMR090W	Q04304	227 aa	Known RBP	0.45	□□□□□ -2.34
SWT1	YOR166C	YMR103C	Q04436	120 aa		0.45	□□□□□ -2.34
SWT1	YOR166C	SWC7	Q06707	132 aa		0.45	□□□□□ -2.34
SWT1	YOR166C	YPL225W	Q08971	146 aa	Known RBP	0.45	□□□□□ -2.34
SWT1	YOR166C	DAD1	Q12248	94 aa		0.45	□□□□□ -2.34
SWT1	YOR166C	YLR307C-A	Q3E825	87 aa		0.45	□□□□□ -2.34
SWT1	YOR166C	PCC1	Q3E833	88 aa		0.45	□□□□□ -2.34
SWT1	YOR166C	GEA1	P47102	1408 aa	Predicted RBP	0.44	□□□□□ -2.34
SWT1	YOR166C	KRE5	P22023	1365 aa		0.44	□□□□□ -2.34
SWT1	YOR166C	RPL22A	P05749	121 aa	Known RBP	0.44	□□□□□ -2.34
SWT1	YOR166C	YSF3	P0C074	85 aa	Predicted RBP	0.44	□□□□□ -2.34
SWT1	YOR166C	PAU2	P32612	120 aa		0.44	□□□□□ -2.34
SWT1	YOR166C	PAU24	P38155	120 aa		0.44	□□□□□ -2.34
SWT1	YOR166C	COX23	P38824	151 aa		0.44	□□□□□ -2.34
SWT1	YOR166C	YIL163C	P40448	117 aa		0.44	□□□□□ -2.34
SWT1	YOR166C	POR2	P40478	281 aa		0.44	□□□□□ -2.34
SWT1	YOR166C	VMA21	P41806	77 aa		0.44	□□□□□ -2.34
SWT1	YOR166C	ZEO1	Q08245	113 aa		0.44	□□□□□ -2.34
SWT1	YOR166C	YOR289W	Q12012	251 aa	Predicted RBP	0.44	□□□□□ -2.34
SWT1	YOR166C	YOS1	Q3E834	85 aa		0.44	□□□□□ -2.34
SWT1	YOR166C	HUG1	Q6Q5K6	68 aa		0.44	□□□□□ -2.34
SWT1	YOR166C	DNA2	P38859	1522 aa		0.43	□□□□□ -2.34
SWT1	YOR166C	GEA2	P39993	1459 aa	Known RBP	0.43	□□□□□ -2.34
SWT1	YOR166C	PAU19	P0CE85	124 aa		0.43	□□□□□ -2.34
SWT1	YOR166C	UBC4	P15731	148 aa		0.43	□□□□□ -2.34
SWT1	YOR166C	PAU3	P25610	124 aa		0.43	□□□□□ -2.34
SWT1	YOR166C	BUD23	P25627	275 aa	Predicted RBP	0.43	□□□□□ -2.34
SWT1	YOR166C	YBR013C	P38215	129 aa		0.43	□□□□□ -2.34
SWT1	YOR166C	MVB12	P42939	101 aa		0.43	□□□□□ -2.34
SWT1	YOR166C	ICS3	P47034	131 aa		0.43	□□□□□ -2.34
SWT1	YOR166C	MIC27	P50945	234 aa		0.43	□□□□□ -2.34
SWT1	YOR166C	YOR034C-A	Q3E735	80 aa		0.43	□□□□□ -2.34
SWT1	YOR166C	YLR363W-A	Q3E747	85 aa		0.43	□□□□□ -2.34
SWT1	YOR166C	YGL041C-B	Q3E750	60 aa		0.43	□□□□□ -2.34
SWT1	YOR166C	YLR285C-A	Q3E771	56 aa		0.43	□□□□□ -2.34
SWT1	YOR166C	MIC10	Q96VH5	97 aa		0.43	□□□□□ -2.34
SWT1	YOR166C	ENV10	Q99382	181 aa		0.43	□□□□□ -2.34
SWT1	YOR166C	REV3	P14284	1504 aa		0.43	□□□□□ -2.34
SWT1	YOR166C	YPK9	Q12697	1472 aa		0.42	□□□□□ -2.34
SWT1	YOR166C	CAT8	P39113	1433 aa		0.42	□□□□□ -2.34
SWT1	YOR166C	YLR419W	Q06698	1435 aa	Known RBP	0.42	□□□□□ -2.34
SWT1	YOR166C	HMRA2	P0CY13	119 aa		0.42	□□□□□ -2.34
SWT1	YOR166C	YHR138C	P38841	114 aa	Predicted RBP	0.42	□□□□□ -2.34
SWT1	YOR166C	CYB5	P40312	120 aa		0.42	□□□□□ -2.34
SWT1	YOR166C	MIX14	Q04341	121 aa		0.42	□□□□□ -2.34
SWT1	YOR166C	YCL048W-A	Q2V2Q2	79 aa		0.42	□□□□□ -2.34
SWT1	YOR166C	YGR240C-A	Q3E786	66 aa		0.42	□□□□□ -2.34
SWT1	YOR166C	KSH1	Q8TGJ3	72 aa		0.42	□□□□□ -2.34
SWT1	YOR166C	GSC2	P40989	1895 aa		0.42	□□□□□ -2.34
SWT1	YOR166C	BPT1	P14772	1559 aa		0.41	□□□□□ -2.34

Retrieved 100 of 5,963 RNA–protein pairs in 31.5 ms