RNA–Protein interactions for RNA: YOR069W

VPS5, Transcript of Nexin-1 homolog, yeastyeast

Gene VPS5, Length 2,028 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS5YOR069W LSM6Q06406 86 aaKnown RBP4.8□□□□□ -1.64
VPS5YOR069W HMRA2P0CY13 119 aa4.79□□□□□ -1.64
VPS5YOR069W PHO85P17157 305 aa4.79□□□□□ -1.64
VPS5YOR069W YHR140WP38842 239 aa4.79□□□□□ -1.64
VPS5YOR069W PFY1P07274 126 aa4.79□□□□□ -1.64
VPS5YOR069W YDL022C-AP0C5L6 82 aa4.79□□□□□ -1.64
VPS5YOR069W YHR213WP0CI67 198 aa4.79□□□□□ -1.64
VPS5YOR069W MRPL20P22354 195 aaPredicted RBP4.79□□□□□ -1.64
VPS5YOR069W BNA2P47125 453 aa4.79□□□□□ -1.64
VPS5YOR069W SIP18P50263 79 aa4.79□□□□□ -1.64
VPS5YOR069W RXT3Q07458 294 aa4.79□□□□□ -1.64
VPS5YOR069W YIR021W-AQ3E739 70 aa4.79□□□□□ -1.64
VPS5YOR069W YLR342W-AQ3E810 57 aa4.78□□□□□ -1.64
VPS5YOR069W TAO3P40468 2376 aa4.77□□□□□ -1.65
VPS5YOR069W UGX2P32772 223 aa4.77□□□□□ -1.65
VPS5YOR069W YIP1P53039 248 aa4.77□□□□□ -1.65
VPS5YOR069W NUP53Q03790 475 aa4.77□□□□□ -1.65
VPS5YOR069W YBL112CQ3E7Y4 105 aa4.77□□□□□ -1.65
VPS5YOR069W KRE1P17260 313 aa4.77□□□□□ -1.65
VPS5YOR069W YNL217WP40152 326 aa4.77□□□□□ -1.65
VPS5YOR069W YOR029WQ12243 111 aa4.77□□□□□ -1.65
VPS5YOR069W YAL063C-AQ3E791 96 aa4.77□□□□□ -1.65
VPS5YOR069W COA3Q3E7B2 85 aa4.77□□□□□ -1.65
VPS5YOR069W YKR045CP36138 183 aa4.76□□□□□ -1.65
VPS5YOR069W RRT1P38192 103 aa4.76□□□□□ -1.65
VPS5YOR069W VHS2P40463 436 aa4.76□□□□□ -1.65
VPS5YOR069W IMP2P46972 177 aa4.76□□□□□ -1.65
VPS5YOR069W MSL5Q12186 476 aaKnown RBP RIP-Chip data4.76□□□□□ -1.65not detected
VPS5YOR069W TIM22Q12328 207 aa4.76□□□□□ -1.65
VPS5YOR069W IGO2Q9P305 131 aa4.76□□□□□ -1.65
VPS5YOR069W AGA1P32323 725 aa4.75□□□□□ -1.65
VPS5YOR069W MOH1P38191 138 aa4.75□□□□□ -1.65
VPS5YOR069W VTC1P40046 129 aaRIP-Chip data4.75□□□□□ -1.65not detected
VPS5YOR069W TOS6P48560 102 aa4.75□□□□□ -1.65
VPS5YOR069W YMR105W-AQ8TGS8 64 aa4.75□□□□□ -1.65
VPS5YOR069W YMR181CQ03231 154 aa4.75□□□□□ -1.65
VPS5YOR069W RPL39P04650 51 aa4.74□□□□□ -1.65
VPS5YOR069W RPS26AP39938 119 aaKnown RBP4.74□□□□□ -1.65
VPS5YOR069W FIP1P45976 327 aa4.74□□□□□ -1.65
VPS5YOR069W YGR039WP53225 103 aa4.74□□□□□ -1.65
VPS5YOR069W FCY1Q12178 158 aa4.74□□□□□ -1.65
VPS5YOR069W KTI12P34253 313 aaKnown RBP4.73□□□□□ -1.65
VPS5YOR069W DSE2P38844 325 aa4.73□□□□□ -1.65
VPS5YOR069W YER085CP40058 173 aa4.73□□□□□ -1.65
VPS5YOR069W GLE2P40066 365 aa4.73□□□□□ -1.65
VPS5YOR069W YDR209CQ03480 137 aa4.73□□□□□ -1.65
VPS5YOR069W RRG8Q06109 277 aa4.73□□□□□ -1.65
VPS5YOR069W YFL041W-AQ3E817 63 aa4.73□□□□□ -1.65
VPS5YOR069W AIM11P87275 137 aa4.73□□□□□ -1.65
VPS5YOR069W YLR361C-AQ3E795 98 aa4.73□□□□□ -1.65
VPS5YOR069W MSN1P22148 382 aa4.72□□□□□ -1.65
VPS5YOR069W NRG2P38082 220 aa4.72□□□□□ -1.65
VPS5YOR069W SPI1P40092 148 aa4.72□□□□□ -1.65
VPS5YOR069W GLO1P50107 326 aa4.72□□□□□ -1.65
VPS5YOR069W ABF2Q02486 183 aa4.72□□□□□ -1.65
VPS5YOR069W AIM34Q03673 198 aa4.72□□□□□ -1.65
VPS5YOR069W YLR194CQ05777 254 aa4.72□□□□□ -1.65
VPS5YOR069W YCR085WP25650 117 aa4.72□□□□□ -1.65
VPS5YOR069W CWP2P43497 92 aa4.72□□□□□ -1.65
VPS5YOR069W YFL051CP43552 160 aa4.72□□□□□ -1.65
VPS5YOR069W YJL027CP47063 138 aaPredicted RBP4.72□□□□□ -1.65
VPS5YOR069W YTH1Q06102 208 aaPredicted RBP4.72□□□□□ -1.65
VPS5YOR069W GAT3Q07928 141 aa4.72□□□□□ -1.65
VPS5YOR069W MID2P36027 376 aa4.71□□□□□ -1.66
VPS5YOR069W YOR008C-AQ3E7B9 74 aa4.71□□□□□ -1.66
VPS5YOR069W RPS8AP0CX39 200 aaKnown RBP4.7□□□□□ -1.66
VPS5YOR069W RPS8BP0CX40 200 aaKnown RBP4.7□□□□□ -1.66
VPS5YOR069W YIA6P40556 373 aa4.7□□□□□ -1.66
VPS5YOR069W IRC23Q08416 157 aa4.7□□□□□ -1.66
VPS5YOR069W PRM7Q12459 698 aa4.7□□□□□ -1.66
VPS5YOR069W YPR053CQ6Q5F3 151 aa4.7□□□□□ -1.66
VPS5YOR069W SEN1Q00416 2231 aaKnown RBP4.7□□□□□ -1.66
VPS5YOR069W MRPL49P40858 161 aaPredicted RBP4.7□□□□□ -1.66
VPS5YOR069W SKI6P46948 246 aaPredicted RBP4.7□□□□□ -1.66
VPS5YOR069W VPS55P47111 140 aa4.7□□□□□ -1.66
VPS5YOR069W YDL186WP48568 277 aa4.7□□□□□ -1.66
VPS5YOR069W MRPL23Q12487 163 aaPredicted RBP4.7□□□□□ -1.66
VPS5YOR069W ENV10Q99382 181 aa4.7□□□□□ -1.66
VPS5YOR069W Q0255P03881 472 aa4.69□□□□□ -1.66
VPS5YOR069W RPS23AP0CX29 145 aaKnown RBP4.69□□□□□ -1.66
VPS5YOR069W RPS23BP0CX30 145 aa4.69□□□□□ -1.66
VPS5YOR069W YCH1P42937 148 aa4.69□□□□□ -1.66
VPS5YOR069W YMR317WQ04893 1140 aa4.69□□□□□ -1.66
VPS5YOR069W RAD6P06104 172 aa4.68□□□□□ -1.66
VPS5YOR069W ATP15P21306 62 aa4.68□□□□□ -1.66
VPS5YOR069W ADH5P38113 351 aaKnown RBP4.68□□□□□ -1.66
VPS5YOR069W URM1P40554 99 aaPredicted RBP4.68□□□□□ -1.66
VPS5YOR069W DUO1P53168 247 aaKnown RBP4.68□□□□□ -1.66
VPS5YOR069W YNL234WP53857 426 aa4.68□□□□□ -1.66
VPS5YOR069W YOL160WQ08321 113 aa4.68□□□□□ -1.66
VPS5YOR069W YDR119W-AQ2V2P9 66 aa4.68□□□□□ -1.66
VPS5YOR069W RPL28P02406 149 aaKnown RBP4.68□□□□□ -1.66
VPS5YOR069W UTH1P36135 365 aa4.68□□□□□ -1.66
VPS5YOR069W CTR2P38865 189 aa4.68□□□□□ -1.66
VPS5YOR069W COX12Q01519 83 aa4.68□□□□□ -1.66
VPS5YOR069W ERF2Q06551 359 aa4.68□□□□□ -1.66
VPS5YOR069W DAP1Q12091 152 aa4.68□□□□□ -1.66
VPS5YOR069W YHR139C-AO13536 103 aa4.67□□□□□ -1.66
VPS5YOR069W MRPL38P35996 138 aaPredicted RBP4.67□□□□□ -1.66
VPS5YOR069W MRPL24P36525 258 aaPredicted RBP4.67□□□□□ -1.66
Retrieved 100 of 5,963 RNA–protein pairs in 25.5 ms