RNA–Protein interactions for RNA: YLR435W

TSR2, Transcript of Protein with a potential role in pre-rRNA processing, yeast

Gene TSR2, Length 618 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
TSR2	YLR435W	RPL12B	P0CX54	165 aa		4.65	□□□□□ -1.67
TSR2	YLR435W	YGL010W	P25338	174 aa		4.65	□□□□□ -1.67
TSR2	YLR435W	PAM17	P36147	197 aa		4.65	□□□□□ -1.67
TSR2	YLR435W	MRPL28	P36527	147 aa		4.65	□□□□□ -1.67
TSR2	YLR435W	KRE9	P39005	276 aa		4.65	□□□□□ -1.67
TSR2	YLR435W	YGR026W	P53217	278 aa		4.65	□□□□□ -1.67
TSR2	YLR435W	AIM34	Q03673	198 aa		4.65	□□□□□ -1.67
TSR2	YLR435W	UPS3	Q04006	179 aa		4.65	□□□□□ -1.67
TSR2	YLR435W	GIM5	Q04493	163 aa		4.65	□□□□□ -1.67
TSR2	YLR435W	YLR042C	Q07990	161 aa		4.65	□□□□□ -1.67
TSR2	YLR435W	CSM4	Q08955	156 aa		4.65	□□□□□ -1.67
TSR2	YLR435W	MRPS9	P38120	278 aa		4.64	□□□□□ -1.67
TSR2	YLR435W	COX16	P47081	118 aa		4.64	□□□□□ -1.67
TSR2	YLR435W	MIX23	P38162	196 aa		4.63	□□□□□ -1.67
TSR2	YLR435W	YCH1	P42937	148 aa		4.63	□□□□□ -1.67
TSR2	YLR435W	MOG1	P47123	218 aa		4.63	□□□□□ -1.67
TSR2	YLR435W	THG1	P53215	237 aa	Known RBP	4.63	□□□□□ -1.67
TSR2	YLR435W	TIM21	P53220	239 aa		4.63	□□□□□ -1.67
TSR2	YLR435W	YPR195C	Q06594	109 aa		4.63	□□□□□ -1.67
TSR2	YLR435W	YGR240C-A	Q3E786	66 aa		4.63	□□□□□ -1.67
TSR2	YLR435W	YCR023C	P25351	611 aa		4.62	□□□□□ -1.67
TSR2	YLR435W	DAD2	P36162	133 aa		4.62	□□□□□ -1.67
TSR2	YLR435W	YHR140W	P38842	239 aa		4.62	□□□□□ -1.67
TSR2	YLR435W	VMA21	P41806	77 aa		4.62	□□□□□ -1.67
TSR2	YLR435W	GPI19	Q04082	140 aa		4.62	□□□□□ -1.67
TSR2	YLR435W	DGA1	Q08650	418 aa		4.62	□□□□□ -1.67
TSR2	YLR435W	YNR034W-A	Q3E841	98 aa		4.62	□□□□□ -1.67
TSR2	YLR435W	ADH3	P07246	375 aa	Known RBP	4.61	□□□□□ -1.67
TSR2	YLR435W	SUR2	P38992	349 aa		4.61	□□□□□ -1.67
TSR2	YLR435W	MGA1	P53050	456 aa		4.61	□□□□□ -1.67
TSR2	YLR435W	GTO3	Q04806	366 aa		4.61	□□□□□ -1.67
TSR2	YLR435W	YLR112W	Q12130	139 aa		4.61	□□□□□ -1.67
TSR2	YLR435W	ZRT1	P32804	376 aa		4.6	□□□□□ -1.67
TSR2	YLR435W	HSP10	P38910	106 aa		4.6	□□□□□ -1.67
TSR2	YLR435W	IRC22	P40006	225 aa		4.6	□□□□□ -1.67
TSR2	YLR435W	SDS23	P53172	527 aa		4.6	□□□□□ -1.67
TSR2	YLR435W	APS2	Q00381	147 aa		4.6	□□□□□ -1.67
TSR2	YLR435W	SNU23	Q12368	194 aa	Predicted RBP	4.6	□□□□□ -1.67
TSR2	YLR435W	RPL27A	P0C2H6	136 aa	Known RBP	4.59	□□□□□ -1.67
TSR2	YLR435W	KTI12	P34253	313 aa	Known RBP	4.59	□□□□□ -1.67
TSR2	YLR435W	ATG8	P38182	117 aa	RIP-Chip data	4.59	□□□□□ -1.67	not detected
TSR2	YLR435W	ARC18	Q05933	178 aa	Known RBP	4.59	□□□□□ -1.67
TSR2	YLR435W	YMR230W-A	Q3E7B5	62 aa		4.59	□□□□□ -1.67
TSR2	YLR435W	HMRA1	P0CY11	126 aa		4.58	□□□□□ -1.68
TSR2	YLR435W	NHP6A	P11632	93 aa	Known RBP	4.58	□□□□□ -1.68
TSR2	YLR435W	PAU7	P39545	55 aa		4.58	□□□□□ -1.68
TSR2	YLR435W	PAU5	P43575	122 aa		4.58	□□□□□ -1.68
TSR2	YLR435W	TVP18	Q04767	167 aa		4.58	□□□□□ -1.68
TSR2	YLR435W	DPP1	Q05521	289 aa		4.58	□□□□□ -1.68
TSR2	YLR435W	PBA1	Q05778	276 aa		4.58	□□□□□ -1.68
TSR2	YLR435W	YLR118C	Q12354	227 aa		4.58	□□□□□ -1.68
TSR2	YLR435W	YOP1	Q12402	180 aa		4.58	□□□□□ -1.68
TSR2	YLR435W	CNB1	P25296	175 aa		4.57	□□□□□ -1.68
TSR2	YLR435W	YKR032W	P36127	104 aa		4.57	□□□□□ -1.68
TSR2	YLR435W	TEM1	P38987	245 aa		4.57	□□□□□ -1.68
TSR2	YLR435W	GAT4	P40569	121 aa		4.57	□□□□□ -1.68
TSR2	YLR435W	CDC40	P40968	455 aa	Predicted RBP	4.57	□□□□□ -1.68
TSR2	YLR435W	SPC1	P46965	94 aa		4.57	□□□□□ -1.68
TSR2	YLR435W	RPL23A	P0CX41	137 aa	Known RBP	4.56	□□□□□ -1.68
TSR2	YLR435W	RPL23B	P0CX42	137 aa	Known RBP	4.56	□□□□□ -1.68
TSR2	YLR435W	DAN1	P47178	298 aa		4.56	□□□□□ -1.68
TSR2	YLR435W	PMP3	P87284	55 aa		4.56	□□□□□ -1.68
TSR2	YLR435W	RRT15	Q3E811	62 aa		4.56	□□□□□ -1.68
TSR2	YLR435W	YLL066W-B	Q8TGJ7	56 aa		4.56	□□□□□ -1.68
TSR2	YLR435W	SVP26	P38869	228 aa		4.55	□□□□□ -1.68
TSR2	YLR435W	PET8	P38921	284 aa		4.55	□□□□□ -1.68
TSR2	YLR435W	PAU15	P40585	124 aa		4.55	□□□□□ -1.68
TSR2	YLR435W	YGR149W	P48236	432 aa		4.55	□□□□□ -1.68
TSR2	YLR435W	FSF1	Q12029	327 aa	Known RBP	4.55	□□□□□ -1.68
TSR2	YLR435W	WIP1	Q2V2P8	89 aa		4.55	□□□□□ -1.68
TSR2	YLR435W	UBC5	P15732	148 aa		4.54	□□□□□ -1.68
TSR2	YLR435W	ANB1	P19211	157 aa		4.54	□□□□□ -1.68
TSR2	YLR435W	YBR013C	P38215	129 aa		4.54	□□□□□ -1.68
TSR2	YLR435W	NSE4	P43124	402 aa		4.54	□□□□□ -1.68
TSR2	YLR435W	DCV1	P43595	202 aa		4.54	□□□□□ -1.68
TSR2	YLR435W	YJL028W	P47062	111 aa		4.54	□□□□□ -1.68
TSR2	YLR435W	YGL088W	P53151	121 aa		4.54	□□□□□ -1.68
TSR2	YLR435W	POM33	Q12164	279 aa		4.54	□□□□□ -1.68
TSR2	YLR435W	SEC4	P07560	215 aa	Known RBP	4.53	□□□□□ -1.68
TSR2	YLR435W	YBR209W	P38311	105 aa		4.53	□□□□□ -1.68
TSR2	YLR435W	YNL200C	P40165	246 aa	Known RBP	4.53	□□□□□ -1.68
TSR2	YLR435W	YCR024C-B	Q3E7Z8	88 aa		4.53	□□□□□ -1.68
TSR2	YLR435W	SAL1	D6W196	494 aa		4.52	□□□□□ -1.69
TSR2	YLR435W	RTC6	O14464	93 aa		4.52	□□□□□ -1.69
TSR2	YLR435W	RPL33A	P05744	107 aa	Known RBP	4.52	□□□□□ -1.69
TSR2	YLR435W	ARC15	P40518	154 aa	RIP-Chip data	4.52	□□□□□ -1.69	not detected
TSR2	YLR435W	YIL059C	P40520	121 aa		4.52	□□□□□ -1.69
TSR2	YLR435W	RPL33B	P41056	107 aa	Known RBP	4.52	□□□□□ -1.69
TSR2	YLR435W	FCF1	Q05498	189 aa	Predicted RBP	4.52	□□□□□ -1.69
TSR2	YLR435W	POR1	P04840	283 aa	Known RBP	4.51	□□□□□ -1.69
TSR2	YLR435W	LCL2	Q08045	131 aa		4.51	□□□□□ -1.69
TSR2	YLR435W	YMR122W-A	Q3E842	84 aa		4.51	□□□□□ -1.69
TSR2	YLR435W	ERI1	P62651	68 aa	Known RBP	4.5	□□□□□ -1.69
TSR2	YLR435W	YMR320W	Q04897	101 aa		4.5	□□□□□ -1.69
TSR2	YLR435W	YPR014C	Q6B0W2	109 aa		4.5	□□□□□ -1.69
TSR2	YLR435W	YER076C	P40049	302 aa		4.49	□□□□□ -1.69
TSR2	YLR435W	YDR115W	Q04598	105 aa		4.49	□□□□□ -1.69
TSR2	YLR435W	PRE1	P22141	198 aa	Known RBP	4.48	□□□□□ -1.69
TSR2	YLR435W	AIM29	P36154	155 aa		4.48	□□□□□ -1.69
TSR2	YLR435W	YER085C	P40058	173 aa		4.48	□□□□□ -1.69

Retrieved 100 of 5,963 RNA–protein pairs in 70.3 ms