RNA–Protein interactions for RNA: YLR423C

ATG17, Transcript of Scaffold protein responsible for phagophore assembly site organization, yeastyeast

Gene ATG17, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
ATG17YLR423C YNL277W-AQ3E7Z0 62 aa2.79□□□□□ -1.96
ATG17YLR423C URB1P34241 1764 aaKnown RBP2.79□□□□□ -1.96
ATG17YLR423C HPM1P40481 377 aa2.78□□□□□ -1.96
ATG17YLR423C SED1Q01589 338 aa2.78□□□□□ -1.96
ATG17YLR423C ATP14Q12349 124 aa2.77□□□□□ -1.97
ATG17YLR423C RPS20P38701 121 aaKnown RBP2.76□□□□□ -1.97
ATG17YLR423C PDR11P40550 1411 aa2.76□□□□□ -1.97
ATG17YLR423C RPL14AP36105 138 aaKnown RBP2.75□□□□□ -1.97
ATG17YLR423C PRS3P38689 320 aaKnown RBP2.75□□□□□ -1.97
ATG17YLR423C RPL14BP38754 138 aaKnown RBP2.75□□□□□ -1.97
ATG17YLR423C NAT5Q08689 176 aa2.75□□□□□ -1.97
ATG17YLR423C FMP49A0A023PZB3 126 aa2.74□□□□□ -1.97
ATG17YLR423C MRPL44P19956 98 aa2.74□□□□□ -1.97
ATG17YLR423C YIL102CP40488 101 aa2.74□□□□□ -1.97
ATG17YLR423C ELC1Q03071 99 aa2.74□□□□□ -1.97
ATG17YLR423C TMA23Q03525 211 aa2.74□□□□□ -1.97
ATG17YLR423C TY4B-HP0C2J7 1802 aa2.74□□□□□ -1.97
ATG17YLR423C TY4B-JP47024 1803 aa2.74□□□□□ -1.97
ATG17YLR423C SNF2P22082 1703 aa2.73□□□□□ -1.97
ATG17YLR423C SRL3P36167 246 aa2.73□□□□□ -1.97
ATG17YLR423C YGR017WP53210 297 aa2.73□□□□□ -1.97
ATG17YLR423C PDR5P33302 1511 aaKnown RBP2.73□□□□□ -1.97
ATG17YLR423C UBR1P19812 1950 aa2.72□□□□□ -1.97
ATG17YLR423C RPL33AP05744 107 aaKnown RBP2.72□□□□□ -1.97
ATG17YLR423C RPL37AP49166 88 aaKnown RBP2.72□□□□□ -1.97
ATG17YLR423C NUM1Q00402 2748 aa2.71□□□□□ -1.98
ATG17YLR423C RPS1AP33442 255 aaKnown RBP2.71□□□□□ -1.98
ATG17YLR423C ATG8P38182 117 aaRIP-Chip data2.71□□□□□ -1.98not detected
ATG17YLR423C CNL1Q06333 122 aa2.71□□□□□ -1.98
ATG17YLR423C CCW12Q12127 133 aa2.71□□□□□ -1.98
ATG17YLR423C YCR050CP25630 102 aa2.7□□□□□ -1.98
ATG17YLR423C MHF1Q3E835 90 aa2.7□□□□□ -1.98
ATG17YLR423C APC1P53886 1748 aa2.7□□□□□ -1.98
ATG17YLR423C TIM8P57744 87 aa2.69□□□□□ -1.98
ATG17YLR423C DYN2Q02647 92 aa2.69□□□□□ -1.98
ATG17YLR423C TOM1Q03280 3268 aa2.69□□□□□ -1.98
ATG17YLR423C QCR10P37299 77 aa2.68□□□□□ -1.98
ATG17YLR423C SFT2P38166 215 aa2.68□□□□□ -1.98
ATG17YLR423C Q0144Q9ZZW2 109 aa2.68□□□□□ -1.98
ATG17YLR423C YPR117WQ06116 2489 aa2.67□□□□□ -1.98
ATG17YLR423C YRF1-3P0CX14 1859 aa2.67□□□□□ -1.98
ATG17YLR423C YRF1-7P0CX15 1859 aa2.67□□□□□ -1.98
ATG17YLR423C YRF1-6P53819 1859 aa2.67□□□□□ -1.98
ATG17YLR423C RIM15P43565 1770 aa2.67□□□□□ -1.98
ATG17YLR423C PHS1P40857 217 aa2.67□□□□□ -1.98
ATG17YLR423C BRP1P53194 125 aa2.67□□□□□ -1.98
ATG17YLR423C YNL122CP53921 115 aaPredicted RBP2.67□□□□□ -1.98
ATG17YLR423C YGL014C-AP0C5N1 53 aa2.66□□□□□ -1.98
ATG17YLR423C CAT8P39113 1433 aa2.66□□□□□ -1.98
ATG17YLR423C ANB1P19211 157 aa2.65□□□□□ -1.99
ATG17YLR423C YCR001WP25347 104 aa2.65□□□□□ -1.99
ATG17YLR423C TRS20P38334 175 aa2.65□□□□□ -1.99
ATG17YLR423C MPC1P53157 130 aaKnown RBP2.65□□□□□ -1.99
ATG17YLR423C NUP192P47054 1683 aa2.65□□□□□ -1.99
ATG17YLR423C FUN14P18411 198 aa2.64□□□□□ -1.99
ATG17YLR423C YAL064WP39711 94 aa2.64□□□□□ -1.99
ATG17YLR423C SFT1P43682 97 aa2.64□□□□□ -1.99
ATG17YLR423C YPL067CQ02754 198 aa2.64□□□□□ -1.99
ATG17YLR423C SDH7Q04401 133 aa2.64□□□□□ -1.99
ATG17YLR423C SEN15Q04675 128 aa2.64□□□□□ -1.99
ATG17YLR423C TVP18Q04767 167 aa2.64□□□□□ -1.99
ATG17YLR423C LCL2Q08045 131 aa2.64□□□□□ -1.99
ATG17YLR423C GEA1P47102 1408 aaPredicted RBP2.64□□□□□ -1.99
ATG17YLR423C TOR1P35169 2470 aa2.64□□□□□ -1.99
ATG17YLR423C RIF1P29539 1916 aa2.64□□□□□ -1.99
ATG17YLR423C FAS2P19097 1887 aaKnown RBP2.63□□□□□ -1.99
ATG17YLR423C HYM1P32464 399 aa2.63□□□□□ -1.99
ATG17YLR423C NMT1P14743 455 aa2.62□□□□□ -1.99
ATG17YLR423C LST8P41318 303 aa2.62□□□□□ -1.99
ATG17YLR423C IRC21Q04772 201 aa2.62□□□□□ -1.99
ATG17YLR423C HAP2P06774 265 aa2.61□□□□□ -1.99
ATG17YLR423C YHR213WP0CI67 198 aa2.61□□□□□ -1.99
ATG17YLR423C YMR122CQ03879 124 aa2.61□□□□□ -1.99
ATG17YLR423C NKP2Q06162 153 aa2.61□□□□□ -1.99
ATG17YLR423C YOR072WQ08486 104 aa2.61□□□□□ -1.99
ATG17YLR423C VPS13Q07878 3144 aa2.61□□□□□ -1.99
ATG17YLR423C KRE5P22023 1365 aa2.61□□□□□ -1.99
ATG17YLR423C YOL013W-AP0C272 63 aaPredicted RBP2.59□□□□□ -1.99
ATG17YLR423C YGL149WP53116 101 aa2.59□□□□□ -1.99
ATG17YLR423C SLO1Q3E784 85 aa2.59□□□□□ -1.99
ATG17YLR423C RAD50P12753 1312 aa2.59□□□□□ -2
ATG17YLR423C TY3B-IQ7LHG5 1498 aaKnown RBP2.58□□□□□ -2
ATG17YLR423C YJL009WP47078 108 aa2.58□□□□□ -2
ATG17YLR423C PAU21P0CE86 164 aa2.57□□□□□ -2
ATG17YLR423C PAU22P0CE87 164 aa2.57□□□□□ -2
ATG17YLR423C HAP3P13434 144 aa2.57□□□□□ -2
ATG17YLR423C UGX2P32772 223 aa2.57□□□□□ -2
ATG17YLR423C MRPL11P36521 249 aaPredicted RBP2.56□□□□□ -2
ATG17YLR423C HSP10P38910 106 aa2.56□□□□□ -2
ATG17YLR423C GAT4P40569 121 aa2.56□□□□□ -2
ATG17YLR423C RSF2P46974 1380 aa2.56□□□□□ -2
ATG17YLR423C SRB8P25648 1427 aa2.56□□□□□ -2
ATG17YLR423C PFY1P07274 126 aa2.55□□□□□ -2
ATG17YLR423C YLR296WQ05898 108 aa2.55□□□□□ -2
ATG17YLR423C KTI11Q3E840 82 aa2.54□□□□□ -2
ATG17YLR423C RPS22AP0C0W1 130 aaKnown RBP2.53□□□□□ -2
ATG17YLR423C RPL40AP0CH08 128 aaKnown RBP2.53□□□□□ -2
ATG17YLR423C RPL40BP0CH09 128 aaKnown RBP2.53□□□□□ -2
ATG17YLR423C MRP49P32388 137 aa2.53□□□□□ -2
ATG17YLR423C MGR2Q02889 113 aa2.53□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 16.3 ms