RNA–Protein interactions for RNA: YLR223C

IFH1, Transcript of Coactivator, regulates transcription of ribosomal protein (RP) genes, yeast

Gene IFH1, Length 3,258 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
IFH1	YLR223C	AHT1	P29589	182 aa		0.74	□□□□□ -2.29
IFH1	YLR223C	YET1	P35723	206 aa		0.74	□□□□□ -2.29
IFH1	YLR223C	YNL200C	P40165	246 aa	Known RBP	0.74	□□□□□ -2.29
IFH1	YLR223C	YNL198C	P40166	100 aa		0.74	□□□□□ -2.29
IFH1	YLR223C	TIR3	P40552	269 aa		0.74	□□□□□ -2.29
IFH1	YLR223C	PHS1	P40857	217 aa		0.74	□□□□□ -2.29
IFH1	YLR223C	YFR035C	P43608	114 aa		0.74	□□□□□ -2.29
IFH1	YLR223C	DAD3	P69850	94 aa		0.74	□□□□□ -2.29
IFH1	YLR223C	EMI1	Q04406	187 aa		0.74	□□□□□ -2.29
IFH1	YLR223C	SPG4	Q04438	115 aa		0.74	□□□□□ -2.29
IFH1	YLR223C	AVO2	Q04749	426 aa		0.74	□□□□□ -2.29
IFH1	YLR223C	YDL157C	Q12082	118 aa		0.74	□□□□□ -2.29
IFH1	YLR223C	RPS25B	P0C0T4	108 aa	Known RBP	0.73	□□□□□ -2.29
IFH1	YLR223C	MRS4	P23500	304 aa		0.73	□□□□□ -2.29
IFH1	YLR223C	PAU16	P35994	123 aa		0.73	□□□□□ -2.29
IFH1	YLR223C	RPB11	P38902	120 aa		0.73	□□□□□ -2.29
IFH1	YLR223C	IRC22	P40006	225 aa		0.73	□□□□□ -2.29
IFH1	YLR223C	CCS1	P40202	249 aa	Known RBP	0.73	□□□□□ -2.29
IFH1	YLR223C	DLS1	P40366	167 aa		0.73	□□□□□ -2.29
IFH1	YLR223C	YHP1	Q04116	353 aa		0.73	□□□□□ -2.29
IFH1	YLR223C	YIL102C-A	Q2V2P5	75 aa		0.73	□□□□□ -2.29
IFH1	YLR223C	YFL041W-A	Q3E817	63 aa		0.73	□□□□□ -2.29
IFH1	YLR223C	TDA8	Q6B2U8	126 aa		0.73	□□□□□ -2.29
IFH1	YLR223C	ENV10	Q99382	181 aa		0.73	□□□□□ -2.29
IFH1	YLR223C	NUM1	Q00402	2748 aa		0.73	□□□□□ -2.29
IFH1	YLR223C	Q0255	P03881	472 aa		0.73	□□□□□ -2.29
IFH1	YLR223C	YOL162W	P0CF19	215 aa		0.73	□□□□□ -2.29
IFH1	YLR223C	SPO13	P23624	291 aa		0.73	□□□□□ -2.29
IFH1	YLR223C	MRP17	P28778	131 aa		0.73	□□□□□ -2.29
IFH1	YLR223C	CSH1	P38287	376 aa		0.73	□□□□□ -2.29
IFH1	YLR223C	HTD2	P38790	280 aa	Known RBP	0.73	□□□□□ -2.29
IFH1	YLR223C	NSA2	P40078	261 aa	Known RBP	0.73	□□□□□ -2.29
IFH1	YLR223C	CYB5	P40312	120 aa		0.73	□□□□□ -2.29
IFH1	YLR223C	PEP8	P40335	379 aa		0.73	□□□□□ -2.29
IFH1	YLR223C	FLX1	P40464	311 aa		0.73	□□□□□ -2.29
IFH1	YLR223C	YJL218W	P40892	196 aa	Known RBP	0.73	□□□□□ -2.29
IFH1	YLR223C	YFL065C	P43539	102 aa		0.73	□□□□□ -2.29
IFH1	YLR223C	THG1	P53215	237 aa	Known RBP	0.73	□□□□□ -2.29
IFH1	YLR223C	YGR050C	P53231	118 aa		0.73	□□□□□ -2.29
IFH1	YLR223C	SWS2	P53937	143 aa		0.73	□□□□□ -2.29
IFH1	YLR223C	YLR042C	Q07990	161 aa		0.73	□□□□□ -2.29
IFH1	YLR223C	YPR203W	Q08994	102 aa		0.73	□□□□□ -2.29
IFH1	YLR223C	VPS68	Q12016	184 aa		0.73	□□□□□ -2.29
IFH1	YLR223C	YIL134C-A	Q45U18	67 aa		0.73	□□□□□ -2.29
IFH1	YLR223C	YML100W-A	Q8TGT0	57 aa		0.73	□□□□□ -2.29
IFH1	YLR223C	FLO9	P39712	1322 aa		0.73	□□□□□ -2.29
IFH1	YLR223C	YKR045C	P36138	183 aa		0.72	□□□□□ -2.29
IFH1	YLR223C	HPA3	P39979	161 aa		0.72	□□□□□ -2.29
IFH1	YLR223C	YER135C	P40082	130 aa		0.72	□□□□□ -2.29
IFH1	YLR223C	VMA21	P41806	77 aa		0.72	□□□□□ -2.29
IFH1	YLR223C	POP3	P53833	195 aa	Predicted RBP	0.72	□□□□□ -2.29
IFH1	YLR223C	LSM7	P53905	115 aa	Known RBP	0.72	□□□□□ -2.29
IFH1	YLR223C	YDR042C	Q03205	200 aa		0.72	□□□□□ -2.29
IFH1	YLR223C	SEN15	Q04675	128 aa		0.72	□□□□□ -2.29
IFH1	YLR223C	ANT1	Q06497	328 aa		0.72	□□□□□ -2.29
IFH1	YLR223C	RRT7	Q07829	113 aa		0.72	□□□□□ -2.29
IFH1	YLR223C	ATO3	Q12359	275 aa		0.72	□□□□□ -2.29
IFH1	YLR223C	YPL247C	Q12523	523 aa		0.72	□□□□□ -2.29
IFH1	YLR223C	YPL038W-A	Q3E7B4	63 aa		0.72	□□□□□ -2.29
IFH1	YLR223C	MHF1	Q3E835	90 aa		0.72	□□□□□ -2.29
IFH1	YLR223C	UMP1	P38293	148 aa		0.72	□□□□□ -2.29
IFH1	YLR223C	TRS20	P38334	175 aa		0.72	□□□□□ -2.29
IFH1	YLR223C	YHL037C	P38733	133 aa		0.72	□□□□□ -2.29
IFH1	YLR223C	YHR138C	P38841	114 aa	Predicted RBP	0.72	□□□□□ -2.29
IFH1	YLR223C	YHR180W	P38868	163 aa		0.72	□□□□□ -2.29
IFH1	YLR223C	GCV3	P39726	170 aa	Predicted RBP	0.72	□□□□□ -2.29
IFH1	YLR223C	HUR1	P45820	110 aa		0.72	□□□□□ -2.29
IFH1	YLR223C	TOS8	P53147	276 aa		0.72	□□□□□ -2.29
IFH1	YLR223C	RAF1	Q06891	181 aa		0.72	□□□□□ -2.29
IFH1	YLR223C	YOR268C	Q08734	132 aa		0.72	□□□□□ -2.29
IFH1	YLR223C	YPL162C	Q12042	273 aa		0.72	□□□□□ -2.29
IFH1	YLR223C	MPD1	Q12404	318 aa	Known RBP	0.72	□□□□□ -2.29
IFH1	YLR223C	ODC2	Q99297	307 aa		0.72	□□□□□ -2.29
IFH1	YLR223C	RPL26A	P05743	127 aa	Known RBP	0.72	□□□□□ -2.29
IFH1	YLR223C	YHR213W	P0CI67	198 aa		0.72	□□□□□ -2.29
IFH1	YLR223C	YCR050C	P25630	102 aa		0.72	□□□□□ -2.29
IFH1	YLR223C	RPL14A	P36105	138 aa	Known RBP	0.72	□□□□□ -2.29
IFH1	YLR223C	YAR068W	P39564	161 aa		0.72	□□□□□ -2.29
IFH1	YLR223C	MIC27	P50945	234 aa		0.72	□□□□□ -2.29
IFH1	YLR223C	RPL26B	P53221	127 aa	Known RBP	0.72	□□□□□ -2.29
IFH1	YLR223C	PET191	Q02772	108 aa		0.72	□□□□□ -2.29
IFH1	YLR223C	ELP6	Q04868	273 aa		0.72	□□□□□ -2.29
IFH1	YLR223C	YDR029W	Q12111	104 aa		0.72	□□□□□ -2.29
IFH1	YLR223C	PDX3	P38075	228 aa	Known RBP	0.71	□□□□□ -2.3
IFH1	YLR223C	PHO88	P38264	188 aa	Predicted RBP	0.71	□□□□□ -2.3
IFH1	YLR223C	YAR029W	P39549	74 aa		0.71	□□□□□ -2.3
IFH1	YLR223C	AIM19	P40502	157 aa		0.71	□□□□□ -2.3
IFH1	YLR223C	ERG25	P53045	309 aa		0.71	□□□□□ -2.3
IFH1	YLR223C	RIM9	Q04734	239 aa		0.71	□□□□□ -2.3
IFH1	YLR223C	NMA1	Q06178	401 aa	Known RBP	0.71	□□□□□ -2.3
IFH1	YLR223C	SYM1	Q06563	197 aa		0.71	□□□□□ -2.3
IFH1	YLR223C	YOR015W	Q12169	119 aa		0.71	□□□□□ -2.3
IFH1	YLR223C	COX19	Q3E731	98 aa		0.71	□□□□□ -2.3
IFH1	YLR223C	RPS25A	Q3E792	108 aa	Predicted RBP	0.71	□□□□□ -2.3
IFH1	YLR223C	YFR032C-B	Q8TGU2	87 aa		0.71	□□□□□ -2.3
IFH1	YLR223C	RAS2	P01120	322 aa	Known RBP	0.71	□□□□□ -2.3
IFH1	YLR223C	YHR032W-A	P0C5N6	59 aa		0.71	□□□□□ -2.3
IFH1	YLR223C	YJL197C-A	P0C5P0	93 aa		0.71	□□□□□ -2.3
IFH1	YLR223C	INO4	P13902	151 aa		0.71	□□□□□ -2.3
IFH1	YLR223C	FZF1	P32805	299 aa		0.71	□□□□□ -2.3

Retrieved 100 of 5,963 RNA–protein pairs in 45 ms