RNA–Protein interactions for RNA: YLR219W

MSC3, Transcript of Protein of unknown function, yeast

Gene MSC3, Length 2,187 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
MSC3	YLR219W	YPL080C	Q02826	108 aa		5.06	□□□□□ -1.6
MSC3	YLR219W	MHR1	Q06630	226 aa		5.06	□□□□□ -1.6
MSC3	YLR219W	YDR215C	Q12240	137 aa		5.06	□□□□□ -1.6
MSC3	YLR219W	YLR122C	Q12312	125 aa		5.05	□□□□□ -1.6
MSC3	YLR219W	TIM22	Q12328	207 aa		5.05	□□□□□ -1.6
MSC3	YLR219W	VAR1	P02381	398 aa		5.05	□□□□□ -1.6
MSC3	YLR219W	RPL12A	P0CX53	165 aa	Known RBP	5.05	□□□□□ -1.6
MSC3	YLR219W	RPL12B	P0CX54	165 aa		5.05	□□□□□ -1.6
MSC3	YLR219W	GSP1	P32835	219 aa	Known RBP	5.05	□□□□□ -1.6
MSC3	YLR219W	GSP2	P32836	220 aa	Known RBP	5.05	□□□□□ -1.6
MSC3	YLR219W	YBR126W-A	Q8TGU7	68 aa		5.05	□□□□□ -1.6
MSC3	YLR219W	UPS3	Q04006	179 aa		5.04	□□□□□ -1.6
MSC3	YLR219W	YLR281C	Q05863	155 aa		5.04	□□□□□ -1.6
MSC3	YLR219W	AGA1	P32323	725 aa		5.04	□□□□□ -1.6
MSC3	YLR219W	NRG2	P38082	220 aa		5.04	□□□□□ -1.6
MSC3	YLR219W	IRC22	P40006	225 aa		5.04	□□□□□ -1.6
MSC3	YLR219W	CWC27	Q02770	301 aa		5.04	□□□□□ -1.6
MSC3	YLR219W	ARC18	Q05933	178 aa	Known RBP	5.04	□□□□□ -1.6
MSC3	YLR219W	FYV7	Q12247	151 aa		5.04	□□□□□ -1.6
MSC3	YLR219W	POR1	P04840	283 aa	Known RBP	5.03	□□□□□ -1.6
MSC3	YLR219W	YGR017W	P53210	297 aa		5.03	□□□□□ -1.6
MSC3	YLR219W	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	5.03	□□□□□ -1.6	not detected
MSC3	YLR219W	SDS23	P53172	527 aa		5.02	□□□□□ -1.61
MSC3	YLR219W	YCR024C-B	Q3E7Z8	88 aa		5.02	□□□□□ -1.61
MSC3	YLR219W	RPS11A	P0CX47	156 aa	Known RBP	5.02	□□□□□ -1.61
MSC3	YLR219W	RPS11B	P0CX48	156 aa	Known RBP	5.02	□□□□□ -1.61
MSC3	YLR219W	THG1	P53215	237 aa	Known RBP	5.02	□□□□□ -1.61
MSC3	YLR219W	COX12	Q01519	83 aa		5.02	□□□□□ -1.61
MSC3	YLR219W	PAU7	P39545	55 aa		5.01	□□□□□ -1.61
MSC3	YLR219W	YBR200W-A	Q3E755	54 aa		5.01	□□□□□ -1.61
MSC3	YLR219W	RPL2A	P0CX45	254 aa	Known RBP	5.01	□□□□□ -1.61
MSC3	YLR219W	RPL2B	P0CX46	254 aa	Known RBP	5.01	□□□□□ -1.61
MSC3	YLR219W	YGR149W	P48236	432 aa		5.01	□□□□□ -1.61
MSC3	YLR219W	Q0255	P03881	472 aa		5	□□□□□ -1.61
MSC3	YLR219W	RPL23A	P0CX41	137 aa	Known RBP	5	□□□□□ -1.61
MSC3	YLR219W	RPL23B	P0CX42	137 aa	Known RBP	5	□□□□□ -1.61
MSC3	YLR219W	AUA1	P32450	94 aa		5	□□□□□ -1.61
MSC3	YLR219W	ZRT1	P32804	376 aa		5	□□□□□ -1.61
MSC3	YLR219W	YHR140W	P38842	239 aa		5	□□□□□ -1.61
MSC3	YLR219W	KEG1	P43614	200 aa		5	□□□□□ -1.61
MSC3	YLR219W	ARL3	Q02804	198 aa		5	□□□□□ -1.61
MSC3	YLR219W	GPI19	Q04082	140 aa		5	□□□□□ -1.61
MSC3	YLR219W	FSF1	Q12029	327 aa	Known RBP	5	□□□□□ -1.61
MSC3	YLR219W	SEC4	P07560	215 aa	Known RBP	4.99	□□□□□ -1.61
MSC3	YLR219W	RPL16B	P26785	198 aa	Known RBP	4.99	□□□□□ -1.61
MSC3	YLR219W	VHS2	P40463	436 aa		4.99	□□□□□ -1.61
MSC3	YLR219W	URM1	P40554	99 aa	Predicted RBP	4.99	□□□□□ -1.61
MSC3	YLR219W	CYT2	Q00873	224 aa		4.99	□□□□□ -1.61
MSC3	YLR219W	RPS22B	Q3E7Y3	130 aa	Known RBP	4.99	□□□□□ -1.61
MSC3	YLR219W	YPR053C	Q6Q5F3	151 aa		4.99	□□□□□ -1.61
MSC3	YLR219W	ERG28	P40030	148 aa		4.99	□□□□□ -1.61
MSC3	YLR219W	LSM8	P47093	109 aa	Known RBP	4.99	□□□□□ -1.61
MSC3	YLR219W	BRP1	P53194	125 aa		4.99	□□□□□ -1.61
MSC3	YLR219W	CYC7	P00045	113 aa		4.98	□□□□□ -1.61
MSC3	YLR219W	RRT13	P40042	185 aa		4.98	□□□□□ -1.61
MSC3	YLR219W	YDR366C	P87287	132 aa		4.98	□□□□□ -1.61
MSC3	YLR219W	POM33	Q12164	279 aa		4.98	□□□□□ -1.61
MSC3	YLR219W	YKR032W	P36127	104 aa		4.98	□□□□□ -1.61
MSC3	YLR219W	YAR1	P46683	200 aa		4.98	□□□□□ -1.61
MSC3	YLR219W	RDS3	Q06835	107 aa	Predicted RBP	4.98	□□□□□ -1.61
MSC3	YLR219W	YLR415C	O13578	112 aa		4.97	□□□□□ -1.61
MSC3	YLR219W	MRPL28	P36527	147 aa		4.97	□□□□□ -1.61
MSC3	YLR219W	YLR361C-A	Q3E795	98 aa		4.97	□□□□□ -1.61
MSC3	YLR219W	YCR001W	P25347	104 aa		4.97	□□□□□ -1.61
MSC3	YLR219W	PET8	P38921	284 aa		4.97	□□□□□ -1.61
MSC3	YLR219W	SCW10	Q04951	389 aa		4.97	□□□□□ -1.61
MSC3	YLR219W	AIM34	Q03673	198 aa		4.96	□□□□□ -1.62
MSC3	YLR219W	YRA2	P36036	203 aa	Known RBP RIP-Chip data	4.95	□□□□□ -1.62	not detected
MSC3	YLR219W	GLO1	P50107	326 aa		4.95	□□□□□ -1.62
MSC3	YLR219W	YOR304C-A	O14468	76 aa		4.95	□□□□□ -1.62
MSC3	YLR219W	YPS5	P53057	165 aa		4.94	□□□□□ -1.62
MSC3	YLR219W	YLR042C	Q07990	161 aa		4.94	□□□□□ -1.62
MSC3	YLR219W	YNL200C	P40165	246 aa	Known RBP	4.94	□□□□□ -1.62
MSC3	YLR219W	YCH1	P42937	148 aa		4.94	□□□□□ -1.62
MSC3	YLR219W	TVP18	Q04767	167 aa		4.94	□□□□□ -1.62
MSC3	YLR219W	VAM10	Q08474	114 aa		4.94	□□□□□ -1.62
MSC3	YLR219W	YCR023C	P25351	611 aa		4.93	□□□□□ -1.62
MSC3	YLR219W	KTI12	P34253	313 aa	Known RBP	4.93	□□□□□ -1.62
MSC3	YLR219W	SAE3	P89114	91 aa		4.93	□□□□□ -1.62
MSC3	YLR219W	TPT1	Q12272	230 aa	Known RBP	4.93	□□□□□ -1.62
MSC3	YLR219W	YER134C	P40081	178 aa		4.92	□□□□□ -1.62
MSC3	YLR219W	MED7	Q08278	222 aa		4.92	□□□□□ -1.62
MSC3	YLR219W	YKL183C-A	Q3E765	70 aa		4.92	□□□□□ -1.62
MSC3	YLR219W	SSS1	P35179	80 aa		4.92	□□□□□ -1.62
MSC3	YLR219W	UIP3	P39547	235 aa		4.92	□□□□□ -1.62
MSC3	YLR219W	YNL217W	P40152	326 aa		4.92	□□□□□ -1.62
MSC3	YLR219W	YIL014C-A	Q02598	104 aa		4.92	□□□□□ -1.62
MSC3	YLR219W	CUE4	Q04201	117 aa	Predicted RBP	4.92	□□□□□ -1.62
MSC3	YLR219W	RPL42A	P0CX27	106 aa	Known RBP	4.91	□□□□□ -1.62
MSC3	YLR219W	RPL42B	P0CX28	106 aa	Known RBP	4.91	□□□□□ -1.62
MSC3	YLR219W	KRE9	P39005	276 aa		4.91	□□□□□ -1.62
MSC3	YLR219W	YFR057W	P43625	151 aa		4.91	□□□□□ -1.62
MSC3	YLR219W	SEN15	Q04675	128 aa		4.91	□□□□□ -1.62
MSC3	YLR219W	YCR075W-A	Q3E830	75 aa		4.91	□□□□□ -1.62
MSC3	YLR219W	SAL1	D6W196	494 aa		4.91	□□□□□ -1.62
MSC3	YLR219W	SGF11	Q03067	99 aa		4.91	□□□□□ -1.62
MSC3	YLR219W	YPR014C	Q6B0W2	109 aa		4.91	□□□□□ -1.62
MSC3	YLR219W	RPS28B	P0C0X0	67 aa	Known RBP	4.9	□□□□□ -1.62
MSC3	YLR219W	OST3	P48439	350 aa		4.9	□□□□□ -1.62
MSC3	YLR219W	YGL118C	P53132	145 aa		4.9	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 84.4 ms