RNA–Protein interactions for RNA: YKR098C

UBP11, Transcript of Ubiquitin-specific protease, yeastyeast

Gene UBP11, Length 2,154 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBP11YKR098C HPA2Q06592 156 aa0.94□□□□□ -2.26
UBP11YKR098C FCF2Q12035 217 aaPredicted RBP0.94□□□□□ -2.26
UBP11YKR098C YIR021W-AQ3E739 70 aa0.94□□□□□ -2.26
UBP11YKR098C TY4B-JP47024 1803 aa0.93□□□□□ -2.26
UBP11YKR098C YAR029WP39549 74 aa0.93□□□□□ -2.26
UBP11YKR098C HHY1P39982 102 aa0.93□□□□□ -2.26
UBP11YKR098C YFR035CP43608 114 aa0.93□□□□□ -2.26
UBP11YKR098C YIL014C-AQ02598 104 aa0.93□□□□□ -2.26
UBP11YKR098C YOR097CQ12274 175 aaPredicted RBP0.93□□□□□ -2.26
UBP11YKR098C TOP2P06786 1428 aaKnown RBP0.93□□□□□ -2.26
UBP11YKR098C YOR304C-AO14468 76 aa0.93□□□□□ -2.26
UBP11YKR098C YCR101CP25607 182 aa0.93□□□□□ -2.26
UBP11YKR098C TDA2P40045 126 aa0.93□□□□□ -2.26
UBP11YKR098C YBR013CP38215 129 aa0.92□□□□□ -2.26
UBP11YKR098C YHR130CP38834 111 aa0.92□□□□□ -2.26
UBP11YKR098C MIC27P50945 234 aa0.92□□□□□ -2.26
UBP11YKR098C PAU12P53343 120 aa0.92□□□□□ -2.26
UBP11YKR098C RTR2Q12378 196 aa0.92□□□□□ -2.26
UBP11YKR098C YCL001W-BQ96VH2 84 aa0.92□□□□□ -2.26
UBP11YKR098C BUD23P25627 275 aaPredicted RBP0.91□□□□□ -2.26
UBP11YKR098C YCR099CP25657 155 aa0.91□□□□□ -2.26
UBP11YKR098C RGI1P40043 161 aaPredicted RBP0.91□□□□□ -2.26
UBP11YKR098C YIL163CP40448 117 aa0.91□□□□□ -2.26
UBP11YKR098C PAM16P42949 149 aa0.91□□□□□ -2.26
UBP11YKR098C EMP24P32803 203 aaKnown RBP0.91□□□□□ -2.26
UBP11YKR098C LHP1P33399 275 aaKnown RBP0.91□□□□□ -2.26
UBP11YKR098C ARL3Q02804 198 aa0.91□□□□□ -2.26
UBP11YKR098C YPL261CQ08976 102 aa0.91□□□□□ -2.26
UBP11YKR098C FYV7Q12247 151 aa0.91□□□□□ -2.26
UBP11YKR098C MED11Q99278 115 aa0.91□□□□□ -2.26
UBP11YKR098C YJL197C-AP0C5P0 93 aa0.9□□□□□ -2.26
UBP11YKR098C ZEO1Q08245 113 aa0.9□□□□□ -2.26
UBP11YKR098C FIT3Q08907 204 aa0.9□□□□□ -2.26
UBP11YKR098C YHR213W-BQ8TGK1 99 aa0.9□□□□□ -2.26
UBP11YKR098C TSC11P40061 1430 aa0.9□□□□□ -2.27
UBP11YKR098C TCB3Q03640 1545 aaKnown RBP0.9□□□□□ -2.27
UBP11YKR098C RPO31P04051 1460 aa0.9□□□□□ -2.27
UBP11YKR098C MVB12P42939 101 aa0.9□□□□□ -2.27
UBP11YKR098C MDS3P53094 1487 aa0.9□□□□□ -2.27
UBP11YKR098C OST5Q92316 86 aa0.9□□□□□ -2.27
UBP11YKR098C RPL37BP51402 88 aaKnown RBP0.89□□□□□ -2.27
UBP11YKR098C PCC1Q3E833 88 aa0.89□□□□□ -2.27
UBP11YKR098C COA6Q3E846 104 aa0.89□□□□□ -2.27
UBP11YKR098C HUG1Q6Q5K6 68 aa0.89□□□□□ -2.27
UBP11YKR098C YRF1-3P0CX14 1859 aa0.89□□□□□ -2.27
UBP11YKR098C YRF1-7P0CX15 1859 aa0.89□□□□□ -2.27
UBP11YKR098C BUD4P47136 1447 aa0.89□□□□□ -2.27
UBP11YKR098C RPL22AP05749 121 aaKnown RBP0.89□□□□□ -2.27
UBP11YKR098C COX23P38824 151 aa0.89□□□□□ -2.27
UBP11YKR098C YER187WP40102 141 aa0.89□□□□□ -2.27
UBP11YKR098C NHP10Q03435 203 aa0.89□□□□□ -2.27
UBP11YKR098C SEC7P11075 2009 aaKnown RBP0.88□□□□□ -2.27
UBP11YKR098C MMS1Q06211 1407 aa0.88□□□□□ -2.27
UBP11YKR098C URA2P07259 2214 aaKnown RBP0.88□□□□□ -2.27
UBP11YKR098C YER039C-AP0CD97 72 aa0.88□□□□□ -2.27
UBP11YKR098C YLR285C-AQ3E771 56 aa0.88□□□□□ -2.27
UBP11YKR098C YLR365WQ7LIF2 110 aa0.88□□□□□ -2.27
UBP11YKR098C ENV10Q99382 181 aa0.88□□□□□ -2.27
UBP11YKR098C SPP41P38904 1435 aa0.88□□□□□ -2.27
UBP11YKR098C SRX1P36077 127 aa0.87□□□□□ -2.27
UBP11YKR098C PAU24P38155 120 aa0.87□□□□□ -2.27
UBP11YKR098C CYB5P40312 120 aa0.87□□□□□ -2.27
UBP11YKR098C SCP1Q08873 200 aa0.87□□□□□ -2.27
UBP11YKR098C MYO4P32492 1471 aa0.87□□□□□ -2.27
UBP11YKR098C PAU2P32612 120 aa0.87□□□□□ -2.27
UBP11YKR098C YMR141CP40211 102 aa0.87□□□□□ -2.27
UBP11YKR098C POR2P40478 281 aa0.87□□□□□ -2.27
UBP11YKR098C SNN1P48232 102 aa0.87□□□□□ -2.27
UBP11YKR098C RPS12P48589 143 aaKnown RBP0.87□□□□□ -2.27
UBP11YKR098C DAD1Q12248 94 aa0.87□□□□□ -2.27
UBP11YKR098C YGL194C-AQ2V2P6 80 aa0.87□□□□□ -2.27
UBP11YKR098C REV3P14284 1504 aa0.87□□□□□ -2.27
UBP11YKR098C SMC4Q12267 1418 aa0.87□□□□□ -2.27
UBP11YKR098C TY1B-DR4Q07793 1604 aa0.86□□□□□ -2.27
UBP11YKR098C TY1B-PR2P0C2J0 1756 aa0.86□□□□□ -2.27
UBP11YKR098C XRN1P22147 1528 aaKnown RBP0.86□□□□□ -2.27
UBP11YKR098C YER188C-AP0C0V2 99 aa0.86□□□□□ -2.27
UBP11YKR098C YIR020CP40575 100 aa0.86□□□□□ -2.27
UBP11YKR098C RPL22BP56628 122 aaKnown RBP0.86□□□□□ -2.27
UBP11YKR098C YSP2Q06681 1438 aa0.86□□□□□ -2.27
UBP11YKR098C TY1B-HO13535 1793 aa0.86□□□□□ -2.27
UBP11YKR098C MRPL31P14063 131 aaPredicted RBP0.86□□□□□ -2.27
UBP11YKR098C GTT1P40582 234 aa0.86□□□□□ -2.27
UBP11YKR098C HAP1P0CE41 1502 aa0.85□□□□□ -2.27
UBP11YKR098C TY1B-DR1Q03855 1755 aa0.85□□□□□ -2.27
UBP11YKR098C TY1B-DR3Q99231 1755 aa0.85□□□□□ -2.27
UBP11YKR098C YCR075W-AQ3E830 75 aa0.85□□□□□ -2.27
UBP11YKR098C KRE5P22023 1365 aa0.85□□□□□ -2.27
UBP11YKR098C HMRA2P0CY13 119 aa0.84□□□□□ -2.27
UBP11YKR098C SNU13P39990 126 aaKnown RBP0.84□□□□□ -2.27
UBP11YKR098C OCA6Q12454 224 aa0.84□□□□□ -2.27
UBP11YKR098C TY1B-DR5P0C2I2 1755 aa0.84□□□□□ -2.27
UBP11YKR098C TY1B-DR6P0C2I3 1755 aa0.84□□□□□ -2.27
UBP11YKR098C TY1B-LR2P0C2I5 1755 aa0.84□□□□□ -2.27
UBP11YKR098C TY1B-LR3P0C2I6 1755 aaKnown RBP0.84□□□□□ -2.27
UBP11YKR098C TY1B-PR1P0C2I9 1755 aaKnown RBP0.84□□□□□ -2.27
UBP11YKR098C TY1B-PR3P0C2J1 1755 aaKnown RBP0.84□□□□□ -2.27
UBP11YKR098C TY2B-LR1P0C2J3 1770 aa0.84□□□□□ -2.27
UBP11YKR098C TY2B-FP0CX63 1770 aa0.84□□□□□ -2.27
UBP11YKR098C TY2B-GR2P0CX64 1770 aa0.84□□□□□ -2.27
Retrieved 100 of 5,963 RNA–protein pairs in 71.2 ms