RNA–Protein interactions for RNA: YKL062W

MSN4, Transcript of Stress-responsive transcriptional activator, yeastyeast

Gene MSN4, Length 1,893 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSN4YKL062W OST5Q92316 86 aa2.79□□□□□ -1.96
MSN4YKL062W RTC6O14464 93 aa2.78□□□□□ -1.96
MSN4YKL062W RPL26AP05743 127 aaKnown RBP2.78□□□□□ -1.96
MSN4YKL062W PAU19P0CE85 124 aa2.78□□□□□ -1.96
MSN4YKL062W PAU3P25610 124 aa2.78□□□□□ -1.96
MSN4YKL062W RPL26BP53221 127 aaKnown RBP2.78□□□□□ -1.96
MSN4YKL062W VPS68Q12016 184 aa2.78□□□□□ -1.96
MSN4YKL062W NRG2P38082 220 aa2.77□□□□□ -1.97
MSN4YKL062W YIR020CP40575 100 aa2.77□□□□□ -1.97
MSN4YKL062W YFL065CP43539 102 aa2.77□□□□□ -1.97
MSN4YKL062W YJR146WP47174 117 aa2.77□□□□□ -1.97
MSN4YKL062W POP3P53833 195 aaPredicted RBP2.77□□□□□ -1.97
MSN4YKL062W YPR203WQ08994 102 aa2.77□□□□□ -1.97
MSN4YKL062W YHR213W-AQ8TGT4 77 aa2.77□□□□□ -1.97
MSN4YKL062W TY1B-NL2Q99337 1749 aaKnown RBP2.77□□□□□ -1.97
MSN4YKL062W RPS25BP0C0T4 108 aaKnown RBP2.77□□□□□ -1.97
MSN4YKL062W STF2P16965 84 aa2.77□□□□□ -1.97
MSN4YKL062W HSP150P32478 413 aa2.77□□□□□ -1.97
MSN4YKL062W YHR138CP38841 114 aaPredicted RBP2.77□□□□□ -1.97
MSN4YKL062W DAN1P47178 298 aa2.77□□□□□ -1.97
MSN4YKL062W RPL22BP56628 122 aaKnown RBP2.77□□□□□ -1.97
MSN4YKL062W RPS25AQ3E792 108 aaPredicted RBP2.77□□□□□ -1.97
MSN4YKL062W PCC1Q3E833 88 aa2.77□□□□□ -1.97
MSN4YKL062W YPK9Q12697 1472 aa2.76□□□□□ -1.97
MSN4YKL062W YHR213WP0CI67 198 aa2.76□□□□□ -1.97
MSN4YKL062W FPR1P20081 114 aaKnown RBP2.76□□□□□ -1.97
MSN4YKL062W SVP26P38869 228 aa2.76□□□□□ -1.97
MSN4YKL062W POC4Q12245 148 aaPredicted RBP2.76□□□□□ -1.97
MSN4YKL062W ROM2P51862 1356 aaKnown RBP2.76□□□□□ -1.97
MSN4YKL062W YCR085WP25650 117 aa2.75□□□□□ -1.97
MSN4YKL062W ATG8P38182 117 aaRIP-Chip data2.75□□□□□ -1.97not detected
MSN4YKL062W YBR013CP38215 129 aa2.75□□□□□ -1.97
MSN4YKL062W YEL014CP39999 101 aa2.75□□□□□ -1.97
MSN4YKL062W HYR1P40581 163 aaKnown RBP2.75□□□□□ -1.97
MSN4YKL062W SNN1P48232 102 aa2.75□□□□□ -1.97
MSN4YKL062W AVO2Q04749 426 aa2.75□□□□□ -1.97
MSN4YKL062W LAA1P39526 2014 aa2.75□□□□□ -1.97
MSN4YKL062W YRF1-2P40105 1681 aa2.75□□□□□ -1.97
MSN4YKL062W KRE1P17260 313 aa2.75□□□□□ -1.97
MSN4YKL062W PAU16P35994 123 aa2.75□□□□□ -1.97
MSN4YKL062W PAU15P40585 124 aa2.75□□□□□ -1.97
MSN4YKL062W YLR194CQ05777 254 aa2.75□□□□□ -1.97
MSN4YKL062W EMC6Q12431 108 aa2.75□□□□□ -1.97
MSN4YKL062W YLR363W-AQ3E747 85 aa2.75□□□□□ -1.97
MSN4YKL062W YMR175W-AQ3E766 64 aa2.75□□□□□ -1.97
MSN4YKL062W SUS1Q6WNK7 96 aa2.75□□□□□ -1.97
MSN4YKL062W RPA190P10964 1664 aaKnown RBP2.74□□□□□ -1.97
MSN4YKL062W YMR030W-AQ3E760 96 aa2.74□□□□□ -1.97
MSN4YKL062W YJL197C-AP0C5P0 93 aa2.73□□□□□ -1.97
MSN4YKL062W COX23P38824 151 aa2.73□□□□□ -1.97
MSN4YKL062W RGM1Q00453 211 aa2.73□□□□□ -1.97
MSN4YKL062W YDR114CQ04597 100 aa2.73□□□□□ -1.97
MSN4YKL062W RDS3Q06835 107 aaPredicted RBP2.73□□□□□ -1.97
MSN4YKL062W YDL012CQ12489 107 aa2.73□□□□□ -1.97
MSN4YKL062W RPB7P34087 171 aa2.72□□□□□ -1.97
MSN4YKL062W GCV3P39726 170 aaPredicted RBP2.72□□□□□ -1.97
MSN4YKL062W MET31Q03081 177 aa2.72□□□□□ -1.97
MSN4YKL062W ICY1Q04329 127 aa2.72□□□□□ -1.97
MSN4YKL062W MYO1P08964 1928 aa2.72□□□□□ -1.97
MSN4YKL062W GSC2P40989 1895 aa2.71□□□□□ -1.97
MSN4YKL062W RPL36BO14455 100 aaKnown RBP2.71□□□□□ -1.98
MSN4YKL062W RPL36AP05745 100 aaPredicted RBP2.71□□□□□ -1.98
MSN4YKL062W PAU5P43575 122 aa2.71□□□□□ -1.98
MSN4YKL062W MHF1Q3E835 90 aa2.71□□□□□ -1.98
MSN4YKL062W NUP159P40477 1460 aa2.71□□□□□ -1.98
MSN4YKL062W RIF1P29539 1916 aa2.71□□□□□ -1.98
MSN4YKL062W QCR8P08525 94 aa2.71□□□□□ -1.98
MSN4YKL062W YFR010W-AP0C5N0 62 aa2.71□□□□□ -1.98
MSN4YKL062W RPA12P32529 125 aaKnown RBP2.71□□□□□ -1.98
MSN4YKL062W SRX1P36077 127 aa2.71□□□□□ -1.98
MSN4YKL062W MRPS9P38120 278 aa2.71□□□□□ -1.98
MSN4YKL062W YJL144WP47009 104 aa2.71□□□□□ -1.98
MSN4YKL062W PRM3Q08931 133 aa2.71□□□□□ -1.98
MSN4YKL062W ENV10Q99382 181 aa2.71□□□□□ -1.98
MSN4YKL062W SWR1Q05471 1514 aa2.7□□□□□ -1.98
MSN4YKL062W YHR022CP38763 256 aa2.7□□□□□ -1.98
MSN4YKL062W RSM18P40033 138 aa2.7□□□□□ -1.98
MSN4YKL062W FAB1P34756 2278 aa2.7□□□□□ -1.98
MSN4YKL062W YHL005CP38752 130 aa2.69□□□□□ -1.98
MSN4YKL062W PAI3P01094 68 aa2.69□□□□□ -1.98
MSN4YKL062W CYT2Q00873 224 aa2.69□□□□□ -1.98
MSN4YKL062W HPA2Q06592 156 aa2.69□□□□□ -1.98
MSN4YKL062W CDC39P25655 2108 aaKnown RBP2.68□□□□□ -1.98
MSN4YKL062W RPS22AP0C0W1 130 aaKnown RBP2.68□□□□□ -1.98
MSN4YKL062W GDB1Q06625 1536 aa2.68□□□□□ -1.98
MSN4YKL062W AGA2P32781 87 aa2.67□□□□□ -1.98
MSN4YKL062W YBR027CP38220 110 aa2.67□□□□□ -1.98
MSN4YKL062W IMP2P46972 177 aa2.67□□□□□ -1.98
MSN4YKL062W ICS3P47034 131 aa2.67□□□□□ -1.98
MSN4YKL062W YLR419WQ06698 1435 aaKnown RBP2.67□□□□□ -1.98
MSN4YKL062W SCC2Q04002 1493 aa2.66□□□□□ -1.98
MSN4YKL062W HMRA2P0CY13 119 aa2.66□□□□□ -1.98
MSN4YKL062W ROX3P25046 220 aa2.66□□□□□ -1.98
MSN4YKL062W SML1Q04964 104 aa2.66□□□□□ -1.98
MSN4YKL062W YDR119W-AQ2V2P9 66 aa2.65□□□□□ -1.98
MSN4YKL062W TY1B-DR4Q07793 1604 aa2.65□□□□□ -1.98
MSN4YKL062W TOM6P33448 61 aa2.65□□□□□ -1.99
MSN4YKL062W POR2P40478 281 aa2.65□□□□□ -1.99
MSN4YKL062W TY1B-DR5P0C2I2 1755 aa2.64□□□□□ -1.99
MSN4YKL062W TY1B-DR6P0C2I3 1755 aa2.64□□□□□ -1.99
Retrieved 100 of 5,963 RNA–protein pairs in 12.8 ms