RNA–Protein interactions for RNA: YKL043W

PHD1, Transcript of Transcriptional activator that enhances pseudohyphal growth, yeastyeast

Gene PHD1, Length 1,101 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PHD1YKL043W YLR415CO13578 112 aa2.49□□□□□ -2.01
PHD1YKL043W ROX3P25046 220 aa2.49□□□□□ -2.01
PHD1YKL043W SWD3P38123 315 aa2.49□□□□□ -2.01
PHD1YKL043W SVP26P38869 228 aa2.49□□□□□ -2.01
PHD1YKL043W SGN1P40561 250 aaKnown RBP RIP-Chip data2.49□□□□□ -2.01not detected
PHD1YKL043W OST1P41543 476 aaKnown RBP2.49□□□□□ -2.01
PHD1YKL043W NCA3P46955 337 aa2.49□□□□□ -2.01
PHD1YKL043W YIP1P53039 248 aa2.49□□□□□ -2.01
PHD1YKL043W NRM1P53718 249 aa2.49□□□□□ -2.01
PHD1YKL043W WSC2P53832 503 aa2.49□□□□□ -2.01
PHD1YKL043W MRPL19P53875 158 aa2.49□□□□□ -2.01
PHD1YKL043W FIT2Q08906 153 aa2.49□□□□□ -2.01
PHD1YKL043W YDR029WQ12111 104 aa2.49□□□□□ -2.01
PHD1YKL043W YLR112WQ12130 139 aa2.49□□□□□ -2.01
PHD1YKL043W IGO2Q9P305 131 aa2.49□□□□□ -2.01
PHD1YKL043W YLR302CO13544 120 aa2.48□□□□□ -2.01
PHD1YKL043W PFY1P07274 126 aa2.48□□□□□ -2.01
PHD1YKL043W RPS8AP0CX39 200 aaKnown RBP2.48□□□□□ -2.01
PHD1YKL043W RPS8BP0CX40 200 aaKnown RBP2.48□□□□□ -2.01
PHD1YKL043W PHO85P17157 305 aa2.48□□□□□ -2.01
PHD1YKL043W RPS2P25443 254 aaKnown RBP2.48□□□□□ -2.01
PHD1YKL043W YKL070WP36087 169 aa2.48□□□□□ -2.01
PHD1YKL043W FMP46P36141 133 aaKnown RBP2.48□□□□□ -2.01
PHD1YKL043W SFT2P38166 215 aa2.48□□□□□ -2.01
PHD1YKL043W YHR140WP38842 239 aa2.48□□□□□ -2.01
PHD1YKL043W AIM19P40502 157 aa2.48□□□□□ -2.01
PHD1YKL043W YIL029CP40538 142 aa2.48□□□□□ -2.01
PHD1YKL043W LST8P41318 303 aa2.48□□□□□ -2.01
PHD1YKL043W CWP2P43497 92 aa2.48□□□□□ -2.01
PHD1YKL043W FIP1P45976 327 aa2.48□□□□□ -2.01
PHD1YKL043W ALG13P53178 202 aa2.48□□□□□ -2.01
PHD1YKL043W PCP1P53259 346 aa2.48□□□□□ -2.01
PHD1YKL043W FHN1P53279 174 aa2.48□□□□□ -2.01
PHD1YKL043W COF1Q03048 143 aaKnown RBP2.48□□□□□ -2.01
PHD1YKL043W GPI19Q04082 140 aa2.48□□□□□ -2.01
PHD1YKL043W MIX14Q04341 121 aa2.48□□□□□ -2.01
PHD1YKL043W YMR317WQ04893 1140 aa2.48□□□□□ -2.01
PHD1YKL043W MSA1Q08471 629 aa2.48□□□□□ -2.01
PHD1YKL043W HFA1P32874 2273 aa2.48□□□□□ -2.01
PHD1YKL043W YMR316C-AI2HB70 103 aa2.47□□□□□ -2.01
PHD1YKL043W YHR139C-AO13536 103 aa2.47□□□□□ -2.01
PHD1YKL043W PIS1P06197 220 aaKnown RBP2.47□□□□□ -2.01
PHD1YKL043W PBI2P0CT04 75 aaKnown RBP2.47□□□□□ -2.01
PHD1YKL043W FZF1P32805 299 aa2.47□□□□□ -2.01
PHD1YKL043W RPL32P38061 130 aaKnown RBP2.47□□□□□ -2.01
PHD1YKL043W SMP1P38128 452 aa2.47□□□□□ -2.01
PHD1YKL043W YHL018WP38744 120 aaPredicted RBP2.47□□□□□ -2.01
PHD1YKL043W RPS26BP39939 119 aaKnown RBP2.47□□□□□ -2.01
PHD1YKL043W ERG28P40030 148 aa2.47□□□□□ -2.01
PHD1YKL043W YER079WP40052 210 aaKnown RBP2.47□□□□□ -2.01
PHD1YKL043W SPI1P40092 148 aa2.47□□□□□ -2.01
PHD1YKL043W BNA1P47096 177 aa2.47□□□□□ -2.01
PHD1YKL043W YNR077CP53758 84 aa2.47□□□□□ -2.01
PHD1YKL043W YNL046WP53956 172 aa2.47□□□□□ -2.01
PHD1YKL043W YDR381C-AQ3E6R5 114 aa2.47□□□□□ -2.01
PHD1YKL043W YCL021W-AQ96VH3 125 aa2.47□□□□□ -2.01
PHD1YKL043W KNH1P50112 268 aa2.46□□□□□ -2.02
PHD1YKL043W SNP1Q00916 300 aaPredicted RBP2.46□□□□□ -2.02
PHD1YKL043W SDC1Q03323 175 aa2.46□□□□□ -2.02
PHD1YKL043W TRS23Q03784 219 aa2.46□□□□□ -2.02
PHD1YKL043W YLR342W-AQ3E810 57 aa2.46□□□□□ -2.02
PHD1YKL043W GCN1P33892 2672 aaKnown RBP2.46□□□□□ -2.02
PHD1YKL043W TRP1P00912 224 aa2.45□□□□□ -2.02
PHD1YKL043W AQY1P0CD91 305 aa2.45□□□□□ -2.02
PHD1YKL043W RPL2AP0CX45 254 aaKnown RBP2.45□□□□□ -2.02
PHD1YKL043W RPL2BP0CX46 254 aaKnown RBP2.45□□□□□ -2.02
PHD1YKL043W MRS3P10566 314 aa2.45□□□□□ -2.02
PHD1YKL043W LDB16P25587 256 aa2.45□□□□□ -2.02
PHD1YKL043W PCL2P25693 308 aa2.45□□□□□ -2.02
PHD1YKL043W PET8P38921 284 aa2.45□□□□□ -2.02
PHD1YKL043W RPS26AP39938 119 aaKnown RBP2.45□□□□□ -2.02
PHD1YKL043W RSM19P53733 91 aaPredicted RBP2.45□□□□□ -2.02
PHD1YKL043W YDR102CQ03864 110 aa2.45□□□□□ -2.02
PHD1YKL043W YOL118CQ08259 102 aa2.45□□□□□ -2.02
PHD1YKL043W YPL261CQ08976 102 aa2.45□□□□□ -2.02
PHD1YKL043W DAD1Q12248 94 aa2.45□□□□□ -2.02
PHD1YKL043W TIM22Q12328 207 aa2.45□□□□□ -2.02
PHD1YKL043W COA3Q3E7B2 85 aa2.45□□□□□ -2.02
PHD1YKL043W YNL277W-AQ3E7Z0 62 aa2.45□□□□□ -2.02
PHD1YKL043W YIL046W-AQ3E7Z4 54 aa2.45□□□□□ -2.02
PHD1YKL043W BRR2P32639 2163 aaKnown RBP2.44□□□□□ -2.02
PHD1YKL043W YAL064W-BO13512 126 aa2.44□□□□□ -2.02
PHD1YKL043W YSF3P0C074 85 aaPredicted RBP2.44□□□□□ -2.02
PHD1YKL043W MXR2P25566 168 aa2.44□□□□□ -2.02
PHD1YKL043W YCR050CP25630 102 aa2.44□□□□□ -2.02
PHD1YKL043W YKR032WP36127 104 aa2.44□□□□□ -2.02
PHD1YKL043W YBL071CP38185 102 aa2.44□□□□□ -2.02
PHD1YKL043W YSY6P38374 65 aa2.44□□□□□ -2.02
PHD1YKL043W CTR2P38865 189 aa2.44□□□□□ -2.02
PHD1YKL043W YEL067CP39978 195 aa2.44□□□□□ -2.02
PHD1YKL043W SIM1P40472 476 aa2.44□□□□□ -2.02
PHD1YKL043W YIL086CP40503 102 aa2.44□□□□□ -2.02
PHD1YKL043W YIA6P40556 373 aa2.44□□□□□ -2.02
PHD1YKL043W YFL051CP43552 160 aa2.44□□□□□ -2.02
PHD1YKL043W YFR054CP43622 192 aa2.44□□□□□ -2.02
PHD1YKL043W VPS55P47111 140 aa2.44□□□□□ -2.02
PHD1YKL043W TOM7P53507 60 aa2.44□□□□□ -2.02
PHD1YKL043W DAD4P69851 72 aa2.44□□□□□ -2.02
PHD1YKL043W YLR194CQ05777 254 aa2.44□□□□□ -2.02
PHD1YKL043W IRC23Q08416 157 aa2.44□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 88.6 ms