RNA–Protein interactions for RNA: YKL028W

TFA1, Transcript of TFIIE large subunit, yeastyeast

Gene TFA1, Length 1,449 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TFA1YKL028W RTC6O14464 93 aa2.79□□□□□ -1.96
TFA1YKL028W CDC39P25655 2108 aaKnown RBP2.79□□□□□ -1.96
TFA1YKL028W RPL36BO14455 100 aaKnown RBP2.78□□□□□ -1.96
TFA1YKL028W RPL36AP05745 100 aaPredicted RBP2.78□□□□□ -1.96
TFA1YKL028W PAU2P32612 120 aa2.78□□□□□ -1.96
TFA1YKL028W FIT3Q08907 204 aa2.78□□□□□ -1.96
TFA1YKL028W FPR1P20081 114 aaKnown RBP2.77□□□□□ -1.97
TFA1YKL028W YIL014C-AQ02598 104 aa2.77□□□□□ -1.97
TFA1YKL028W PRM7Q12459 698 aa2.77□□□□□ -1.97
TFA1YKL028W YDL012CQ12489 107 aa2.77□□□□□ -1.97
TFA1YKL028W FLO9P39712 1322 aa2.77□□□□□ -1.97
TFA1YKL028W ESC1Q03661 1658 aaKnown RBP2.77□□□□□ -1.97
TFA1YKL028W DAN1P47178 298 aa2.76□□□□□ -1.97
TFA1YKL028W YLR194CQ05777 254 aa2.76□□□□□ -1.97
TFA1YKL028W YDR029WQ12111 104 aa2.76□□□□□ -1.97
TFA1YKL028W TAR1Q8TGM6 124 aa2.76□□□□□ -1.97
TFA1YKL028W ATG8P38182 117 aaRIP-Chip data2.76□□□□□ -1.97not detected
TFA1YKL028W SNN1P48232 102 aa2.76□□□□□ -1.97
TFA1YKL028W MIX14Q04341 121 aa2.76□□□□□ -1.97
TFA1YKL028W HRT1Q08273 121 aa2.76□□□□□ -1.97
TFA1YKL028W PCC1Q3E833 88 aa2.76□□□□□ -1.97
TFA1YKL028W PDR10P51533 1564 aa2.75□□□□□ -1.97
TFA1YKL028W QCR8P08525 94 aa2.75□□□□□ -1.97
TFA1YKL028W YJL197C-AP0C5P0 93 aa2.75□□□□□ -1.97
TFA1YKL028W PAU19P0CE85 124 aa2.75□□□□□ -1.97
TFA1YKL028W PAU3P25610 124 aa2.75□□□□□ -1.97
TFA1YKL028W PAU24P38155 120 aa2.75□□□□□ -1.97
TFA1YKL028W EMC5P40540 141 aa2.75□□□□□ -1.97
TFA1YKL028W MSL1P40567 111 aaPredicted RBP2.75□□□□□ -1.97
TFA1YKL028W RPL22BP56628 122 aaKnown RBP2.75□□□□□ -1.97
TFA1YKL028W YLR296WQ05898 108 aa2.75□□□□□ -1.97
TFA1YKL028W HPA2Q06592 156 aa2.75□□□□□ -1.97
TFA1YKL028W LTE1P07866 1435 aa2.75□□□□□ -1.97
TFA1YKL028W RPL13BP40212 199 aaKnown RBP2.74□□□□□ -1.97
TFA1YKL028W YHR213WP0CI67 198 aa2.73□□□□□ -1.97
TFA1YKL028W HMRA1P0CY11 126 aa2.73□□□□□ -1.97
TFA1YKL028W GSC2P40989 1895 aa2.73□□□□□ -1.97
TFA1YKL028W SRX1P36077 127 aa2.72□□□□□ -1.97
TFA1YKL028W YIR020CP40575 100 aa2.72□□□□□ -1.97
TFA1YKL028W RSM19P53733 91 aaPredicted RBP2.72□□□□□ -1.97
TFA1YKL028W FAB1P34756 2278 aa2.72□□□□□ -1.97
TFA1YKL028W COX23P38824 151 aa2.71□□□□□ -1.98
TFA1YKL028W YEL008WP40001 126 aa2.71□□□□□ -1.98
TFA1YKL028W MYO1P08964 1928 aa2.71□□□□□ -1.98
TFA1YKL028W YGL014C-AP0C5N1 53 aa2.7□□□□□ -1.98
TFA1YKL028W PAU16P35994 123 aa2.7□□□□□ -1.98
TFA1YKL028W PAU15P40585 124 aa2.7□□□□□ -1.98
TFA1YKL028W YMR082CQ04276 118 aa2.7□□□□□ -1.98
TFA1YKL028W SEN15Q04675 128 aa2.7□□□□□ -1.98
TFA1YKL028W YLR162WQ06235 118 aa2.7□□□□□ -1.98
TFA1YKL028W ECM12O13529 151 aa2.69□□□□□ -1.98
TFA1YKL028W YBR219CP38317 127 aa2.69□□□□□ -1.98
TFA1YKL028W LST8P41318 303 aa2.69□□□□□ -1.98
TFA1YKL028W YBR027CP38220 110 aa2.68□□□□□ -1.98
TFA1YKL028W YHR138CP38841 114 aaPredicted RBP2.68□□□□□ -1.98
TFA1YKL028W SED1Q01589 338 aa2.68□□□□□ -1.98
TFA1YKL028W RRT15Q3E811 62 aa2.68□□□□□ -1.98
TFA1YKL028W RPA190P10964 1664 aaKnown RBP2.68□□□□□ -1.98
TFA1YKL028W RPL33AP05744 107 aaKnown RBP2.68□□□□□ -1.98
TFA1YKL028W PFY1P07274 126 aa2.68□□□□□ -1.98
TFA1YKL028W NRG2P38082 220 aa2.68□□□□□ -1.98
TFA1YKL028W RGM1Q00453 211 aa2.68□□□□□ -1.98
TFA1YKL028W YMR122CQ03879 124 aa2.67□□□□□ -1.98
TFA1YKL028W YHR086W-AQ3E746 53 aa2.67□□□□□ -1.98
TFA1YKL028W YNL146C-AQ3E7Z1 64 aa2.67□□□□□ -1.98
TFA1YKL028W SUS1Q6WNK7 96 aa2.67□□□□□ -1.98
TFA1YKL028W YSP2Q06681 1438 aa2.67□□□□□ -1.98
TFA1YKL028W CYR1P08678 2026 aaKnown RBP2.66□□□□□ -1.98
TFA1YKL028W POR2P40478 281 aa2.66□□□□□ -1.98
TFA1YKL028W VAM10Q08474 114 aa2.66□□□□□ -1.98
TFA1YKL028W COA3Q3E7B2 85 aa2.66□□□□□ -1.98
TFA1YKL028W TY1B-PR2P0C2J0 1756 aa2.65□□□□□ -1.98
TFA1YKL028W LAA1P39526 2014 aa2.65□□□□□ -1.98
TFA1YKL028W HMRA2P0CY13 119 aa2.65□□□□□ -1.99
TFA1YKL028W AIM4P38305 123 aaPredicted RBP2.65□□□□□ -1.99
TFA1YKL028W CYB5P40312 120 aa2.65□□□□□ -1.99
TFA1YKL028W YLR363W-AQ3E747 85 aa2.65□□□□□ -1.99
TFA1YKL028W ROM2P51862 1356 aaKnown RBP2.65□□□□□ -1.99
TFA1YKL028W YLR419WQ06698 1435 aaKnown RBP2.64□□□□□ -1.99
TFA1YKL028W YCL042WP25572 119 aa2.64□□□□□ -1.99
TFA1YKL028W SRB6P32570 121 aa2.64□□□□□ -1.99
TFA1YKL028W PRM3Q08931 133 aa2.64□□□□□ -1.99
TFA1YKL028W DNA2P38859 1522 aa2.63□□□□□ -1.99
TFA1YKL028W YDR042CQ03205 200 aa2.63□□□□□ -1.99
TFA1YKL028W YLR285C-AQ3E771 56 aa2.63□□□□□ -1.99
TFA1YKL028W RPL22AP05749 121 aaKnown RBP2.62□□□□□ -1.99
TFA1YKL028W YHL005CP38752 130 aa2.62□□□□□ -1.99
TFA1YKL028W COA4Q05809 96 aa2.62□□□□□ -1.99
TFA1YKL028W GCV3P39726 170 aaPredicted RBP2.61□□□□□ -1.99
TFA1YKL028W YFL065CP43539 102 aa2.61□□□□□ -1.99
TFA1YKL028W PAU5P43575 122 aa2.61□□□□□ -1.99
TFA1YKL028W SWR1Q05471 1514 aa2.61□□□□□ -1.99
TFA1YKL028W SEC7P11075 2009 aaKnown RBP2.61□□□□□ -1.99
TFA1YKL028W YIL163CP40448 117 aa2.6□□□□□ -1.99
TFA1YKL028W RSM18P40033 138 aa2.59□□□□□ -1.99
TFA1YKL028W CWP2P43497 92 aa2.59□□□□□ -1.99
TFA1YKL028W YMR321CQ04898 105 aa2.59□□□□□ -1.99
TFA1YKL028W UBR2Q07963 1872 aa2.59□□□□□ -1.99
TFA1YKL028W YSF3P0C074 85 aaPredicted RBP2.59□□□□□ -2
TFA1YKL028W LSM6Q06406 86 aaKnown RBP2.59□□□□□ -2
Retrieved 100 of 5,963 RNA–protein pairs in 15.7 ms