RNA–Protein interactions for RNA: YJL087C

TRL1, Transcript of tRNA ligase, yeastyeast

Gene TRL1, Length 2,484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRL1YJL087C YPR153WQ06537 140 aa1.3□□□□□ -2.2
TRL1YJL087C IRC20Q06554 1556 aa1.3□□□□□ -2.2
TRL1YJL087C RPO21P04050 1733 aaKnown RBP1.29□□□□□ -2.2
TRL1YJL087C BNI1P41832 1953 aa1.29□□□□□ -2.2
TRL1YJL087C PAU21P0CE86 164 aa1.29□□□□□ -2.2
TRL1YJL087C PAU22P0CE87 164 aa1.29□□□□□ -2.2
TRL1YJL087C YHR130CP38834 111 aa1.29□□□□□ -2.2
TRL1YJL087C IPT1P38954 527 aa1.29□□□□□ -2.2
TRL1YJL087C YEA6P39953 335 aa1.29□□□□□ -2.2
TRL1YJL087C YAE1P47118 141 aaPredicted RBP1.29□□□□□ -2.2
TRL1YJL087C GIS2P53849 153 aaKnown RBP RIP-Chip data1.29□□□□□ -2.2not detected
TRL1YJL087C GPI11Q06636 219 aa1.29□□□□□ -2.2
TRL1YJL087C PRM7Q12459 698 aa1.29□□□□□ -2.2
TRL1YJL087C YLR365WQ7LIF2 110 aa1.29□□□□□ -2.2
TRL1YJL087C NTE1Q04958 1679 aa1.29□□□□□ -2.2
TRL1YJL087C HAP3P13434 144 aa1.29□□□□□ -2.2
TRL1YJL087C EMP24P32803 203 aaKnown RBP1.29□□□□□ -2.2
TRL1YJL087C HYR1P40581 163 aaKnown RBP1.29□□□□□ -2.2
TRL1YJL087C PAU12P53343 120 aa1.29□□□□□ -2.2
TRL1YJL087C YPL067CQ02754 198 aa1.29□□□□□ -2.2
TRL1YJL087C MET31Q03081 177 aa1.29□□□□□ -2.2
TRL1YJL087C AIM18P38884 321 aa1.28□□□□□ -2.2
TRL1YJL087C BRP1P53194 125 aa1.28□□□□□ -2.2
TRL1YJL087C YRF1-1P0CX20 1796 aa1.28□□□□□ -2.2
TRL1YJL087C YRF1-5P0CX21 1796 aa1.28□□□□□ -2.2
TRL1YJL087C YRF1-8P0CX22 1796 aa1.28□□□□□ -2.2
TRL1YJL087C DNF1P32660 1571 aa1.28□□□□□ -2.2
TRL1YJL087C KRE5P22023 1365 aa1.28□□□□□ -2.2
TRL1YJL087C RTC6O14464 93 aa1.28□□□□□ -2.2
TRL1YJL087C YGR164WP53291 111 aa1.28□□□□□ -2.2
TRL1YJL087C LTE1P07866 1435 aa1.28□□□□□ -2.21
TRL1YJL087C POL1P13382 1468 aa1.27□□□□□ -2.21
TRL1YJL087C RPL40AP0CH08 128 aaKnown RBP1.27□□□□□ -2.21
TRL1YJL087C RPL40BP0CH09 128 aaKnown RBP1.27□□□□□ -2.21
TRL1YJL087C FPR1P20081 114 aaKnown RBP1.27□□□□□ -2.21
TRL1YJL087C YEL008WP40001 126 aa1.27□□□□□ -2.21
TRL1YJL087C YIL014C-AQ02598 104 aa1.27□□□□□ -2.21
TRL1YJL087C MHF1Q3E835 90 aa1.27□□□□□ -2.21
TRL1YJL087C MIC10Q96VH5 97 aa1.27□□□□□ -2.21
TRL1YJL087C FAB1P34756 2278 aa1.27□□□□□ -2.21
TRL1YJL087C FLO9P39712 1322 aa1.27□□□□□ -2.21
TRL1YJL087C SMC4Q12267 1418 aa1.27□□□□□ -2.21
TRL1YJL087C PRE1P22141 198 aaKnown RBP1.27□□□□□ -2.21
TRL1YJL087C MRPL15P36523 253 aa1.27□□□□□ -2.21
TRL1YJL087C ECM31P38122 312 aa1.27□□□□□ -2.21
TRL1YJL087C TAR1Q8TGM6 124 aa1.27□□□□□ -2.21
TRL1YJL087C SPO14P36126 1683 aa1.27□□□□□ -2.21
TRL1YJL087C MLP2P40457 1679 aa1.27□□□□□ -2.21
TRL1YJL087C PAU2P32612 120 aa1.26□□□□□ -2.21
TRL1YJL087C PEP8P40335 379 aa1.26□□□□□ -2.21
TRL1YJL087C YLR162WQ06235 118 aa1.26□□□□□ -2.21
TRL1YJL087C YPL261CQ08976 102 aa1.26□□□□□ -2.21
TRL1YJL087C UFD4P33202 1483 aa1.26□□□□□ -2.21
TRL1YJL087C YGL010WP25338 174 aa1.26□□□□□ -2.21
TRL1YJL087C MRPL11P36521 249 aaPredicted RBP1.26□□□□□ -2.21
TRL1YJL087C NRG2P38082 220 aa1.26□□□□□ -2.21
TRL1YJL087C PAU24P38155 120 aa1.26□□□□□ -2.21
TRL1YJL087C ATG8P38182 117 aaRIP-Chip data1.26□□□□□ -2.21not detected
TRL1YJL087C YMR090WQ04304 227 aaKnown RBP1.26□□□□□ -2.21
TRL1YJL087C YCR075W-AQ3E830 75 aa1.26□□□□□ -2.21
TRL1YJL087C HAP1P0CE41 1502 aa1.25□□□□□ -2.21
TRL1YJL087C PDR12Q02785 1511 aa1.25□□□□□ -2.21
TRL1YJL087C DNF2Q12675 1612 aa1.25□□□□□ -2.21
TRL1YJL087C RPL36BO14455 100 aaKnown RBP1.25□□□□□ -2.21
TRL1YJL087C RPL36AP05745 100 aaPredicted RBP1.25□□□□□ -2.21
TRL1YJL087C YBR219CP38317 127 aa1.25□□□□□ -2.21
TRL1YJL087C IGO1P53897 168 aa1.25□□□□□ -2.21
TRL1YJL087C YLR194CQ05777 254 aa1.25□□□□□ -2.21
TRL1YJL087C SCP1Q08873 200 aa1.25□□□□□ -2.21
TRL1YJL087C DAD1Q12248 94 aa1.25□□□□□ -2.21
TRL1YJL087C MYO4P32492 1471 aa1.25□□□□□ -2.21
TRL1YJL087C DOP1Q03921 1698 aa1.25□□□□□ -2.21
TRL1YJL087C MMS22Q06164 1454 aa1.25□□□□□ -2.21
TRL1YJL087C YER187WP40102 141 aa1.25□□□□□ -2.21
TRL1YJL087C GTT1P40582 234 aa1.25□□□□□ -2.21
TRL1YJL087C YHR086W-AQ3E746 53 aa1.25□□□□□ -2.21
TRL1YJL087C KSH1Q8TGJ3 72 aa1.25□□□□□ -2.21
TRL1YJL087C CDC39P25655 2108 aaKnown RBP1.24□□□□□ -2.21
TRL1YJL087C UBC4P15731 148 aa1.24□□□□□ -2.21
TRL1YJL087C YBR242WP38331 238 aa1.24□□□□□ -2.21
TRL1YJL087C RGM1Q00453 211 aa1.24□□□□□ -2.21
TRL1YJL087C YGL194C-AQ2V2P6 80 aa1.24□□□□□ -2.21
TRL1YJL087C PCC1Q3E833 88 aa1.24□□□□□ -2.21
TRL1YJL087C OST5Q92316 86 aa1.24□□□□□ -2.21
TRL1YJL087C SNQ2P32568 1501 aaKnown RBP1.24□□□□□ -2.21
TRL1YJL087C CHC1P22137 1653 aaKnown RBP1.24□□□□□ -2.21
TRL1YJL087C GEA2P39993 1459 aaKnown RBP1.24□□□□□ -2.21
TRL1YJL087C YBR027CP38220 110 aa1.24□□□□□ -2.21
TRL1YJL087C SNN1P48232 102 aa1.24□□□□□ -2.21
TRL1YJL087C HPA2Q06592 156 aa1.24□□□□□ -2.21
TRL1YJL087C YOS1Q3E834 85 aa1.24□□□□□ -2.21
TRL1YJL087C COA6Q3E846 104 aa1.24□□□□□ -2.21
TRL1YJL087C STU1P38198 1513 aa1.24□□□□□ -2.21
TRL1YJL087C VTH1P40438 1549 aa1.24□□□□□ -2.21
TRL1YJL087C VTH2P40890 1549 aa1.24□□□□□ -2.21
TRL1YJL087C YOR093CQ12275 1648 aa1.23□□□□□ -2.21
TRL1YJL087C LYS2P07702 1392 aa1.23□□□□□ -2.21
TRL1YJL087C PAU19P0CE85 124 aa1.23□□□□□ -2.21
TRL1YJL087C PAU3P25610 124 aa1.23□□□□□ -2.21
TRL1YJL087C FIT1Q04433 528 aa1.23□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 135.5 ms