RNA–Protein interactions for RNA: YJL047C

RTT101, Transcript of Cullin subunit of a Roc1p-dependent E3 ubiquitin ligase complex, yeastyeast

Gene RTT101, Length 2,529 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RTT101YJL047C HSP10P38910 106 aa1.34□□□□□ -2.2
RTT101YJL047C HYR1P40581 163 aaKnown RBP1.34□□□□□ -2.2
RTT101YJL047C HUR1P45820 110 aa1.34□□□□□ -2.2
RTT101YJL047C CYT2Q00873 224 aa1.34□□□□□ -2.2
RTT101YJL047C YIL014C-AQ02598 104 aa1.34□□□□□ -2.2
RTT101YJL047C RPS25AQ3E792 108 aaPredicted RBP1.34□□□□□ -2.2
RTT101YJL047C YEL014CP39999 101 aa1.33□□□□□ -2.2
RTT101YJL047C EMC5P40540 141 aa1.33□□□□□ -2.2
RTT101YJL047C RSM19P53733 91 aaPredicted RBP1.33□□□□□ -2.2
RTT101YJL047C YPL067CQ02754 198 aa1.33□□□□□ -2.2
RTT101YJL047C GPI11Q06636 219 aa1.33□□□□□ -2.2
RTT101YJL047C NAT5Q08689 176 aa1.33□□□□□ -2.2
RTT101YJL047C YLR296WQ05898 108 aa1.33□□□□□ -2.2
RTT101YJL047C YMR030W-AQ3E760 96 aa1.33□□□□□ -2.2
RTT101YJL047C OST5Q92316 86 aa1.33□□□□□ -2.2
RTT101YJL047C SOD1P00445 154 aaKnown RBP1.32□□□□□ -2.2
RTT101YJL047C RPL13BP40212 199 aaKnown RBP1.32□□□□□ -2.2
RTT101YJL047C MSL1P40567 111 aaPredicted RBP1.32□□□□□ -2.2
RTT101YJL047C YIR020CP40575 100 aa1.32□□□□□ -2.2
RTT101YJL047C MIX14Q04341 121 aa1.32□□□□□ -2.2
RTT101YJL047C DAD1Q12248 94 aa1.32□□□□□ -2.2
RTT101YJL047C COA6Q3E846 104 aa1.32□□□□□ -2.2
RTT101YJL047C CYR1P08678 2026 aaKnown RBP1.32□□□□□ -2.2
RTT101YJL047C MLP1Q02455 1875 aaKnown RBP1.32□□□□□ -2.2
RTT101YJL047C YJL197C-AP0C5P0 93 aa1.32□□□□□ -2.2
RTT101YJL047C MRPL11P36521 249 aaPredicted RBP1.32□□□□□ -2.2
RTT101YJL047C YLR194CQ05777 254 aa1.32□□□□□ -2.2
RTT101YJL047C UBR2Q07963 1872 aa1.32□□□□□ -2.2
RTT101YJL047C SWR1Q05471 1514 aa1.31□□□□□ -2.2
RTT101YJL047C PAU19P0CE85 124 aa1.31□□□□□ -2.2
RTT101YJL047C PAU3P25610 124 aa1.31□□□□□ -2.2
RTT101YJL047C SML1Q04964 104 aa1.31□□□□□ -2.2
RTT101YJL047C ECM12O13529 151 aa1.31□□□□□ -2.2
RTT101YJL047C QCR8P08525 94 aa1.31□□□□□ -2.2
RTT101YJL047C SRB6P32570 121 aa1.31□□□□□ -2.2
RTT101YJL047C RPB7P34087 171 aa1.31□□□□□ -2.2
RTT101YJL047C ATG8P38182 117 aaRIP-Chip data1.31□□□□□ -2.2not detected
RTT101YJL047C RPL22BP56628 122 aaKnown RBP1.31□□□□□ -2.2
RTT101YJL047C PCC1Q3E833 88 aa1.31□□□□□ -2.2
RTT101YJL047C TY1B-GR3Q12316 1755 aa1.31□□□□□ -2.2
RTT101YJL047C TY1B-ORQ92393 1755 aa1.31□□□□□ -2.2
RTT101YJL047C YPK9Q12697 1472 aa1.31□□□□□ -2.2
RTT101YJL047C COX23P38824 151 aa1.3□□□□□ -2.2
RTT101YJL047C EMC6Q12431 108 aa1.3□□□□□ -2.2
RTT101YJL047C PAU16P35994 123 aa1.3□□□□□ -2.2
RTT101YJL047C PAU15P40585 124 aa1.3□□□□□ -2.2
RTT101YJL047C VMA21P41806 77 aa1.3□□□□□ -2.2
RTT101YJL047C SNN1P48232 102 aa1.3□□□□□ -2.2
RTT101YJL047C FMT1P32785 401 aa1.29□□□□□ -2.2
RTT101YJL047C SRX1P36077 127 aa1.29□□□□□ -2.2
RTT101YJL047C CWP2P43497 92 aa1.29□□□□□ -2.2
RTT101YJL047C RGM1Q00453 211 aa1.29□□□□□ -2.2
RTT101YJL047C YDR042CQ03205 200 aa1.29□□□□□ -2.2
RTT101YJL047C TAR1Q8TGM6 124 aa1.29□□□□□ -2.2
RTT101YJL047C TY1B-DR5P0C2I2 1755 aa1.29□□□□□ -2.2
RTT101YJL047C TY1B-DR6P0C2I3 1755 aa1.29□□□□□ -2.2
RTT101YJL047C TY1B-LR2P0C2I5 1755 aa1.29□□□□□ -2.2
RTT101YJL047C TY1B-LR3P0C2I6 1755 aaKnown RBP1.29□□□□□ -2.2
RTT101YJL047C TY1B-PR1P0C2I9 1755 aaKnown RBP1.29□□□□□ -2.2
RTT101YJL047C TY1B-PR3P0C2J1 1755 aaKnown RBP1.29□□□□□ -2.2
RTT101YJL047C YHR213WP0CI67 198 aa1.29□□□□□ -2.2
RTT101YJL047C YHR138CP38841 114 aaPredicted RBP1.29□□□□□ -2.2
RTT101YJL047C DNA2P38859 1522 aa1.29□□□□□ -2.2
RTT101YJL047C TY1B-JR1P47098 1755 aa1.29□□□□□ -2.2
RTT101YJL047C MET31Q03081 177 aa1.29□□□□□ -2.2
RTT101YJL047C TY1B-ML2Q03434 1755 aaKnown RBP1.29□□□□□ -2.2
RTT101YJL047C TY1B-ER1Q03612 1755 aa1.29□□□□□ -2.2
RTT101YJL047C TY1B-ML1Q04711 1755 aaKnown RBP1.29□□□□□ -2.2
RTT101YJL047C TY1B-GR2Q12269 1755 aa1.29□□□□□ -2.2
RTT101YJL047C TY1B-OLQ12273 1755 aa1.29□□□□□ -2.2
RTT101YJL047C TY1B-PLQ12414 1755 aaKnown RBP1.29□□□□□ -2.2
RTT101YJL047C FAS2P19097 1887 aaKnown RBP1.28□□□□□ -2.2
RTT101YJL047C GDB1Q06625 1536 aa1.28□□□□□ -2.2
RTT101YJL047C YLR419WQ06698 1435 aaKnown RBP1.28□□□□□ -2.2
RTT101YJL047C ROM2P51862 1356 aaKnown RBP1.28□□□□□ -2.2
RTT101YJL047C YEL008WP40001 126 aa1.28□□□□□ -2.2
RTT101YJL047C MIX17Q03667 156 aa1.28□□□□□ -2.2
RTT101YJL047C POC4Q12245 148 aaPredicted RBP1.28□□□□□ -2.2
RTT101YJL047C MHF1Q3E835 90 aa1.28□□□□□ -2.2
RTT101YJL047C SLH1P53327 1967 aaKnown RBP1.28□□□□□ -2.2
RTT101YJL047C ESP1Q03018 1630 aa1.28□□□□□ -2.2
RTT101YJL047C BPT1P14772 1559 aa1.28□□□□□ -2.2
RTT101YJL047C RPO31P04051 1460 aa1.28□□□□□ -2.2
RTT101YJL047C FLO9P39712 1322 aa1.28□□□□□ -2.2
RTT101YJL047C RPL36BO14455 100 aaKnown RBP1.28□□□□□ -2.2
RTT101YJL047C RPL36AP05745 100 aaPredicted RBP1.28□□□□□ -2.2
RTT101YJL047C YBR027CP38220 110 aa1.28□□□□□ -2.2
RTT101YJL047C AIM4P38305 123 aaPredicted RBP1.28□□□□□ -2.2
RTT101YJL047C DSE2P38844 325 aa1.28□□□□□ -2.2
RTT101YJL047C CYB5P40312 120 aa1.28□□□□□ -2.2
RTT101YJL047C DAN1P47178 298 aa1.28□□□□□ -2.2
RTT101YJL047C YHR007C-AQ07074 71 aa1.28□□□□□ -2.2
RTT101YJL047C YGL014C-AP0C5N1 53 aa1.27□□□□□ -2.21
RTT101YJL047C PAU5P43575 122 aa1.27□□□□□ -2.21
RTT101YJL047C YMR175W-AQ3E766 64 aa1.27□□□□□ -2.21
RTT101YJL047C HPA2Q06592 156 aa1.27□□□□□ -2.21
RTT101YJL047C POL1P13382 1468 aa1.27□□□□□ -2.21
RTT101YJL047C FAB1P34756 2278 aa1.26□□□□□ -2.21
RTT101YJL047C HMRA2P0CY13 119 aa1.26□□□□□ -2.21
RTT101YJL047C RPS22AP0C0W1 130 aaKnown RBP1.26□□□□□ -2.21
Retrieved 100 of 5,963 RNA–protein pairs in 35.3 ms