RNA–Protein interactions for RNA: YJL029C

VPS53, Transcript of Component of the GARP (Golgi-associated retrograde protein) complex, yeastyeast

Gene VPS53, Length 2,469 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS53YJL029C YBR013CP38215 129 aa2.53□□□□□ -2
VPS53YJL029C SRP14P38985 146 aa2.53□□□□□ -2
VPS53YJL029C YNL217WP40152 326 aa2.53□□□□□ -2
VPS53YJL029C YIL163CP40448 117 aa2.53□□□□□ -2
VPS53YJL029C ATP23P53722 227 aa2.53□□□□□ -2
VPS53YJL029C FMP49A0A023PZB3 126 aa2.52□□□□□ -2.01
VPS53YJL029C RTC6O14464 93 aa2.52□□□□□ -2.01
VPS53YJL029C RPL27AP0C2H6 136 aaKnown RBP2.52□□□□□ -2.01
VPS53YJL029C MRPL31P14063 131 aaPredicted RBP2.52□□□□□ -2.01
VPS53YJL029C YCR023CP25351 611 aa2.52□□□□□ -2.01
VPS53YJL029C MIX23P38162 196 aa2.52□□□□□ -2.01
VPS53YJL029C YHR140WP38842 239 aa2.52□□□□□ -2.01
VPS53YJL029C PAU7P39545 55 aa2.52□□□□□ -2.01
VPS53YJL029C YIL024CP40543 189 aa2.52□□□□□ -2.01
VPS53YJL029C PAU5P43575 122 aa2.52□□□□□ -2.01
VPS53YJL029C YGR149WP48236 432 aa2.52□□□□□ -2.01
VPS53YJL029C GIS2P53849 153 aaKnown RBP RIP-Chip data2.52□□□□□ -2.01not detected
VPS53YJL029C GPI19Q04082 140 aa2.52□□□□□ -2.01
VPS53YJL029C ATP14Q12349 124 aa2.52□□□□□ -2.01
VPS53YJL029C YLR118CQ12354 227 aa2.52□□□□□ -2.01
VPS53YJL029C DCN1Q12395 269 aa2.52□□□□□ -2.01
VPS53YJL029C YIL002W-AQ3E7Z5 69 aa2.52□□□□□ -2.01
VPS53YJL029C YBR298C-AQ8TGK4 73 aa2.52□□□□□ -2.01
VPS53YJL029C RPL42AP0CX27 106 aaKnown RBP2.52□□□□□ -2.01
VPS53YJL029C RPL42BP0CX28 106 aaKnown RBP2.52□□□□□ -2.01
VPS53YJL029C UBC5P15732 148 aa2.52□□□□□ -2.01
VPS53YJL029C DAD3P69850 94 aa2.52□□□□□ -2.01
VPS53YJL029C ARC18Q05933 178 aaKnown RBP2.52□□□□□ -2.01
VPS53YJL029C YOP1Q12402 180 aa2.52□□□□□ -2.01
VPS53YJL029C RPL33AP05744 107 aaKnown RBP2.51□□□□□ -2.01
VPS53YJL029C FZF1P32805 299 aa2.51□□□□□ -2.01
VPS53YJL029C RPL33BP41056 107 aaKnown RBP2.51□□□□□ -2.01
VPS53YJL029C MGA1P53050 456 aa2.51□□□□□ -2.01
VPS53YJL029C PMP3P87284 55 aa2.51□□□□□ -2.01
VPS53YJL029C APS2Q00381 147 aa2.51□□□□□ -2.01
VPS53YJL029C POM33Q12164 279 aa2.51□□□□□ -2.01
VPS53YJL029C YMR122W-AQ3E842 84 aa2.51□□□□□ -2.01
VPS53YJL029C ERG28P40030 148 aa2.51□□□□□ -2.01
VPS53YJL029C GAT4P40569 121 aa2.51□□□□□ -2.01
VPS53YJL029C CDC40P40968 455 aaPredicted RBP2.51□□□□□ -2.01
VPS53YJL029C YJL028WP47062 111 aa2.51□□□□□ -2.01
VPS53YJL029C LSO2Q3E772 92 aaKnown RBP2.51□□□□□ -2.01
VPS53YJL029C YCL001W-BQ96VH2 84 aa2.51□□□□□ -2.01
VPS53YJL029C SAL1D6W196 494 aa2.5□□□□□ -2.01
VPS53YJL029C NHP6AP11632 93 aaKnown RBP2.5□□□□□ -2.01
VPS53YJL029C KTI12P34253 313 aaKnown RBP2.5□□□□□ -2.01
VPS53YJL029C RPB11P38902 120 aa2.5□□□□□ -2.01
VPS53YJL029C PGD1P40356 397 aa2.5□□□□□ -2.01
VPS53YJL029C BNS1P50084 137 aa2.5□□□□□ -2.01
VPS53YJL029C DPP1Q05521 289 aa2.5□□□□□ -2.01
VPS53YJL029C DGA1Q08650 418 aa2.5□□□□□ -2.01
VPS53YJL029C CSM4Q08955 156 aa2.5□□□□□ -2.01
VPS53YJL029C YLL066W-BQ8TGJ7 56 aa2.5□□□□□ -2.01
VPS53YJL029C DAN1P47178 298 aa2.5□□□□□ -2.01
VPS53YJL029C GTO3Q04806 366 aa2.5□□□□□ -2.01
VPS53YJL029C NAT3Q06504 195 aa2.5□□□□□ -2.01
VPS53YJL029C ADH3P07246 375 aaKnown RBP2.49□□□□□ -2.01
VPS53YJL029C HUA1P40325 198 aa2.49□□□□□ -2.01
VPS53YJL029C PAU15P40585 124 aa2.49□□□□□ -2.01
VPS53YJL029C HIT1P46973 164 aa2.49□□□□□ -2.01
VPS53YJL029C TVP18Q04767 167 aa2.49□□□□□ -2.01
VPS53YJL029C PBA1Q05778 276 aa2.49□□□□□ -2.01
VPS53YJL029C ATP16Q12165 160 aa2.49□□□□□ -2.01
VPS53YJL029C STF1P01098 86 aa2.48□□□□□ -2.01
VPS53YJL029C ANB1P19211 157 aa2.48□□□□□ -2.01
VPS53YJL029C ZRT1P32804 376 aa2.48□□□□□ -2.01
VPS53YJL029C YAR029WP39549 74 aa2.48□□□□□ -2.01
VPS53YJL029C THG1P53215 237 aaKnown RBP2.48□□□□□ -2.01
VPS53YJL029C BET5Q03630 159 aa2.48□□□□□ -2.01
VPS53YJL029C YBR090CP38253 122 aa2.48□□□□□ -2.01
VPS53YJL029C RPS22BQ3E7Y3 130 aaKnown RBP2.48□□□□□ -2.01
VPS53YJL029C CUP2P15315 225 aa2.47□□□□□ -2.01
VPS53YJL029C ARC15P40518 154 aaRIP-Chip data2.47□□□□□ -2.01not detected
VPS53YJL029C DXO1Q06349 442 aa2.47□□□□□ -2.01
VPS53YJL029C SNU23Q12368 194 aaPredicted RBP2.47□□□□□ -2.01
VPS53YJL029C YER076CP40049 302 aa2.47□□□□□ -2.01
VPS53YJL029C TRP1P00912 224 aa2.46□□□□□ -2.02
VPS53YJL029C DCV1P43595 202 aa2.46□□□□□ -2.02
VPS53YJL029C YDR115WQ04598 105 aa2.46□□□□□ -2.02
VPS53YJL029C PFY1P07274 126 aa2.46□□□□□ -2.02
VPS53YJL029C YGL010WP25338 174 aa2.46□□□□□ -2.02
VPS53YJL029C NTF2P33331 125 aaKnown RBP2.46□□□□□ -2.02
VPS53YJL029C YKR070WP36151 352 aaKnown RBP2.46□□□□□ -2.02
VPS53YJL029C HHO1P53551 258 aa2.46□□□□□ -2.02
VPS53YJL029C YMR320WQ04897 101 aa2.46□□□□□ -2.02
VPS53YJL029C YNR034W-AQ3E841 98 aa2.46□□□□□ -2.02
VPS53YJL029C SDS23P53172 527 aa2.45□□□□□ -2.02
VPS53YJL029C YGR017WP53210 297 aa2.45□□□□□ -2.02
VPS53YJL029C MGR2Q02889 113 aa2.45□□□□□ -2.02
VPS53YJL029C YPR195CQ06594 109 aa2.45□□□□□ -2.02
VPS53YJL029C PAU19P0CE85 124 aa2.45□□□□□ -2.02
VPS53YJL029C PAU21P0CE86 164 aa2.45□□□□□ -2.02
VPS53YJL029C PAU22P0CE87 164 aa2.45□□□□□ -2.02
VPS53YJL029C PAU3P25610 124 aa2.45□□□□□ -2.02
VPS53YJL029C RPL16AP26784 199 aaKnown RBP2.45□□□□□ -2.02
VPS53YJL029C TOS6P48560 102 aa2.45□□□□□ -2.02
VPS53YJL029C DFM1Q12743 341 aaKnown RBP2.45□□□□□ -2.02
VPS53YJL029C CNB1P25296 175 aa2.44□□□□□ -2.02
VPS53YJL029C RPC10P40422 70 aa2.44□□□□□ -2.02
VPS53YJL029C OST3P48439 350 aa2.44□□□□□ -2.02
Retrieved 100 of 5,963 RNA–protein pairs in 58.2 ms