RNA–Protein interactions for RNA: YHR113W

APE4, Transcript of Cytoplasmic aspartyl aminopeptidase with possible vacuole function, yeastyeast

Gene APE4, Length 1,473 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
APE4YHR113W YOP1Q12402 180 aa5.15□□□□□ -1.58
APE4YHR113W AUA1P32450 94 aa5.14□□□□□ -1.59
APE4YHR113W THG1P53215 237 aaKnown RBP5.14□□□□□ -1.59
APE4YHR113W AGA1P32323 725 aa5.13□□□□□ -1.59
APE4YHR113W MIX23P38162 196 aa5.13□□□□□ -1.59
APE4YHR113W PAU7P39545 55 aa5.13□□□□□ -1.59
APE4YHR113W SEC72P39742 193 aaKnown RBP5.13□□□□□ -1.59
APE4YHR113W IRC22P40006 225 aa5.13□□□□□ -1.59
APE4YHR113W PAU5P43575 122 aa5.13□□□□□ -1.59
APE4YHR113W YGR026WP53217 278 aa5.13□□□□□ -1.59
APE4YHR113W YCR075W-AQ3E830 75 aa5.13□□□□□ -1.59
APE4YHR113W VAR1P02381 398 aa5.13□□□□□ -1.59
APE4YHR113W RPS8AP0CX39 200 aaKnown RBP5.13□□□□□ -1.59
APE4YHR113W RPS8BP0CX40 200 aaKnown RBP5.13□□□□□ -1.59
APE4YHR113W RPL12AP0CX53 165 aaKnown RBP5.13□□□□□ -1.59
APE4YHR113W RPL12BP0CX54 165 aa5.13□□□□□ -1.59
APE4YHR113W HMRA1P0CY11 126 aa5.13□□□□□ -1.59
APE4YHR113W FRS1P15624 595 aaKnown RBP5.13□□□□□ -1.59
APE4YHR113W VHS2P40463 436 aa5.13□□□□□ -1.59
APE4YHR113W SDS23P53172 527 aa5.13□□□□□ -1.59
APE4YHR113W SCW10Q04951 389 aa5.13□□□□□ -1.59
APE4YHR113W RDS3Q06835 107 aaPredicted RBP5.13□□□□□ -1.59
APE4YHR113W RPL16BP26785 198 aaKnown RBP5.12□□□□□ -1.59
APE4YHR113W ELF1P36053 145 aa5.12□□□□□ -1.59
APE4YHR113W HHO1P53551 258 aa5.12□□□□□ -1.59
APE4YHR113W RUB1Q03919 77 aa5.12□□□□□ -1.59
APE4YHR113W ZRT1P32804 376 aa5.11□□□□□ -1.59
APE4YHR113W YDR366CP87287 132 aa5.11□□□□□ -1.59
APE4YHR113W SGF11Q03067 99 aa5.11□□□□□ -1.59
APE4YHR113W POM33Q12164 279 aa5.11□□□□□ -1.59
APE4YHR113W RPL27AP0C2H6 136 aaKnown RBP5.1□□□□□ -1.59
APE4YHR113W YBR013CP38215 129 aa5.1□□□□□ -1.59
APE4YHR113W YHR140WP38842 239 aa5.1□□□□□ -1.59
APE4YHR113W GTT1P40582 234 aa5.1□□□□□ -1.59
APE4YHR113W HAL1Q01766 294 aa5.1□□□□□ -1.59
APE4YHR113W GPI19Q04082 140 aa5.1□□□□□ -1.59
APE4YHR113W WIP1Q2V2P8 89 aa5.1□□□□□ -1.59
APE4YHR113W YBR200W-AQ3E755 54 aa5.1□□□□□ -1.59
APE4YHR113W YKL070WP36087 169 aa5.09□□□□□ -1.59
APE4YHR113W YPS5P53057 165 aa5.09□□□□□ -1.59
APE4YHR113W MHR1Q06630 226 aa5.09□□□□□ -1.59
APE4YHR113W YLR415CO13578 112 aa5.08□□□□□ -1.6
APE4YHR113W RPL23AP0CX41 137 aaKnown RBP5.08□□□□□ -1.6
APE4YHR113W RPL23BP0CX42 137 aaKnown RBP5.08□□□□□ -1.6
APE4YHR113W CWC27Q02770 301 aa5.08□□□□□ -1.6
APE4YHR113W AIM34Q03673 198 aa5.08□□□□□ -1.6
APE4YHR113W GSP1P32835 219 aaKnown RBP5.07□□□□□ -1.6
APE4YHR113W GSP2P32836 220 aaKnown RBP5.07□□□□□ -1.6
APE4YHR113W RRT13P40042 185 aa5.07□□□□□ -1.6
APE4YHR113W GLO1P50107 326 aa5.07□□□□□ -1.6
APE4YHR113W TVP18Q04767 167 aa5.07□□□□□ -1.6
APE4YHR113W YLR042CQ07990 161 aa5.07□□□□□ -1.6
APE4YHR113W FYV7Q12247 151 aa5.07□□□□□ -1.6
APE4YHR113W ERG27Q12452 347 aaKnown RBP5.07□□□□□ -1.6
APE4YHR113W RPL27BP0C2H7 136 aaKnown RBP5.07□□□□□ -1.6
APE4YHR113W PAU19P0CE85 124 aa5.07□□□□□ -1.6
APE4YHR113W PAU21P0CE86 164 aa5.07□□□□□ -1.6
APE4YHR113W PAU22P0CE87 164 aa5.07□□□□□ -1.6
APE4YHR113W PAU3P25610 124 aa5.07□□□□□ -1.6
APE4YHR113W MRPL28P36527 147 aa5.07□□□□□ -1.6
APE4YHR113W YNL217WP40152 326 aa5.07□□□□□ -1.6
APE4YHR113W LSM8P47093 109 aaKnown RBP5.07□□□□□ -1.6
APE4YHR113W BRP1P53194 125 aa5.07□□□□□ -1.6
APE4YHR113W ARC18Q05933 178 aaKnown RBP5.07□□□□□ -1.6
APE4YHR113W VAM10Q08474 114 aa5.07□□□□□ -1.6
APE4YHR113W POR1P04840 283 aaKnown RBP5.06□□□□□ -1.6
APE4YHR113W SEC4P07560 215 aaKnown RBP5.06□□□□□ -1.6
APE4YHR113W YPT53P36019 220 aa5.06□□□□□ -1.6
APE4YHR113W YCH1P42937 148 aa5.06□□□□□ -1.6
APE4YHR113W FSF1Q12029 327 aaKnown RBP5.06□□□□□ -1.6
APE4YHR113W YPL080CQ02826 108 aa5.05□□□□□ -1.6
APE4YHR113W DGA1Q08650 418 aa5.05□□□□□ -1.6
APE4YHR113W RPS22BQ3E7Y3 130 aaKnown RBP5.05□□□□□ -1.6
APE4YHR113W YCR024C-BQ3E7Z8 88 aa5.05□□□□□ -1.6
APE4YHR113W KTI12P34253 313 aaKnown RBP5.03□□□□□ -1.6
APE4YHR113W YKR032WP36127 104 aa5.03□□□□□ -1.6
APE4YHR113W AIM29P36154 155 aa5.03□□□□□ -1.6
APE4YHR113W TEM1P38987 245 aa5.03□□□□□ -1.6
APE4YHR113W CYT2Q00873 224 aa5.03□□□□□ -1.6
APE4YHR113W RPL42AP0CX27 106 aaKnown RBP5.02□□□□□ -1.61
APE4YHR113W RPL42BP0CX28 106 aaKnown RBP5.02□□□□□ -1.61
APE4YHR113W YCR023CP25351 611 aa5.02□□□□□ -1.61
APE4YHR113W KRE9P39005 276 aa5.02□□□□□ -1.61
APE4YHR113W YGR149WP48236 432 aa5.02□□□□□ -1.61
APE4YHR113W ARL3Q02804 198 aa5.02□□□□□ -1.61
APE4YHR113W CRC1Q12289 327 aa5.02□□□□□ -1.61
APE4YHR113W YPR014CQ6B0W2 109 aa5.02□□□□□ -1.61
APE4YHR113W PET8P38921 284 aa5.01□□□□□ -1.61
APE4YHR113W YGR240C-AQ3E786 66 aa5.01□□□□□ -1.61
APE4YHR113W PMP3P87284 55 aa5□□□□□ -1.61
APE4YHR113W SAL1D6W196 494 aa5□□□□□ -1.61
APE4YHR113W DCV1P43595 202 aa5□□□□□ -1.61
APE4YHR113W ATP23P53722 227 aa5□□□□□ -1.61
APE4YHR113W YBR209WP38311 105 aa4.99□□□□□ -1.61
APE4YHR113W YER076CP40049 302 aa4.99□□□□□ -1.61
APE4YHR113W YIL059CP40520 121 aa4.98□□□□□ -1.61
APE4YHR113W RPR2P40571 144 aa4.98□□□□□ -1.61
APE4YHR113W YGL118CP53132 145 aa4.98□□□□□ -1.61
APE4YHR113W YNL200CP40165 246 aaKnown RBP4.97□□□□□ -1.61
APE4YHR113W CDC40P40968 455 aaPredicted RBP4.97□□□□□ -1.61
Retrieved 100 of 5,963 RNA–protein pairs in 67 ms