RNA–Protein interactions for RNA: YHR111W

UBA4, Transcript of E1-like protein that activates Urm1p before urmylation, yeastyeast

Gene UBA4, Length 1,323 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
UBA4YHR111W PAM17P36147 197 aa7.21□□□□□ -1.26
UBA4YHR111W TEM1P38987 245 aa7.21□□□□□ -1.26
UBA4YHR111W GTO3Q04806 366 aa7.21□□□□□ -1.26
UBA4YHR111W YPR195CQ06594 109 aa7.21□□□□□ -1.26
UBA4YHR111W YOP1Q12402 180 aa7.21□□□□□ -1.26
UBA4YHR111W CDC40P40968 455 aaPredicted RBP7.2□□□□□ -1.26
UBA4YHR111W TVP18Q04767 167 aa7.2□□□□□ -1.26
UBA4YHR111W GAT4P40569 121 aa7.19□□□□□ -1.26
UBA4YHR111W VMA21P41806 77 aa7.19□□□□□ -1.26
UBA4YHR111W DPP1Q05521 289 aa7.19□□□□□ -1.26
UBA4YHR111W PBA1Q05778 276 aa7.19□□□□□ -1.26
UBA4YHR111W DAD2P36162 133 aa7.18□□□□□ -1.26
UBA4YHR111W YLL066W-BQ8TGJ7 56 aa7.18□□□□□ -1.26
UBA4YHR111W ATG8P38182 117 aaRIP-Chip data7.17□□□□□ -1.26not detected
UBA4YHR111W YNL200CP40165 246 aaKnown RBP7.17□□□□□ -1.26
UBA4YHR111W PMP3P87284 55 aa7.17□□□□□ -1.26
UBA4YHR111W POM33Q12164 279 aa7.17□□□□□ -1.26
UBA4YHR111W SNU23Q12368 194 aaPredicted RBP7.17□□□□□ -1.26
UBA4YHR111W TY1A-LR4P0C2I8 440 aaKnown RBP7.16□□□□□ -1.26
UBA4YHR111W RPL42AP0CX27 106 aaKnown RBP7.16□□□□□ -1.26
UBA4YHR111W RPL42BP0CX28 106 aaKnown RBP7.16□□□□□ -1.26
UBA4YHR111W TY1A-DR6P0CX70 440 aa7.16□□□□□ -1.26
UBA4YHR111W TY1A-ER1P0CX71 440 aa7.16□□□□□ -1.26
UBA4YHR111W TY1A-LR2P0CX72 440 aa7.16□□□□□ -1.26
UBA4YHR111W TY1A-PLP0CX73 440 aa7.16□□□□□ -1.26
UBA4YHR111W TY1A-JR1P0CX74 440 aa7.16□□□□□ -1.26
UBA4YHR111W TY1A-LR3P0CX75 440 aa7.16□□□□□ -1.26
UBA4YHR111W TY1A-ML2P0CX76 440 aa7.16□□□□□ -1.26
UBA4YHR111W UBC5P15732 148 aa7.16□□□□□ -1.26
UBA4YHR111W SDH8P38345 138 aa7.16□□□□□ -1.26
UBA4YHR111W PAU15P40585 124 aa7.16□□□□□ -1.26
UBA4YHR111W YJL028WP47062 111 aa7.16□□□□□ -1.26
UBA4YHR111W SDS23P53172 527 aa7.16□□□□□ -1.26
UBA4YHR111W TY1A-GR1Q12085 440 aa7.16□□□□□ -1.26
UBA4YHR111W TY1A-PR3Q6Q5H1 440 aaKnown RBP7.16□□□□□ -1.26
UBA4YHR111W TY1A-OLQ92392 440 aaKnown RBP7.16□□□□□ -1.26
UBA4YHR111W RPL11AP0C0W9 174 aaKnown RBP7.15□□□□□ -1.26
UBA4YHR111W CNB1P25296 175 aa7.15□□□□□ -1.26
UBA4YHR111W ERI1P62651 68 aaKnown RBP7.15□□□□□ -1.26
UBA4YHR111W RPL11BQ3E757 174 aaPredicted RBP7.15□□□□□ -1.26
UBA4YHR111W RTC6O14464 93 aa7.14□□□□□ -1.27
UBA4YHR111W RPL33AP05744 107 aaKnown RBP7.14□□□□□ -1.27
UBA4YHR111W RPL33BP41056 107 aaKnown RBP7.14□□□□□ -1.27
UBA4YHR111W YGR149WP48236 432 aa7.14□□□□□ -1.27
UBA4YHR111W ANB1P19211 157 aa7.13□□□□□ -1.27
UBA4YHR111W DAN1P47178 298 aa7.13□□□□□ -1.27
UBA4YHR111W GIS2P53849 153 aaKnown RBP RIP-Chip data7.13□□□□□ -1.27not detected
UBA4YHR111W YMR122W-AQ3E842 84 aa7.13□□□□□ -1.27
UBA4YHR111W RPL23AP0CX41 137 aaKnown RBP7.12□□□□□ -1.27
UBA4YHR111W RPL23BP0CX42 137 aaKnown RBP7.12□□□□□ -1.27
UBA4YHR111W YKR032WP36127 104 aa7.12□□□□□ -1.27
UBA4YHR111W DCV1P43595 202 aa7.11□□□□□ -1.27
UBA4YHR111W VTS1Q08831 523 aaKnown RBP RIP-Chip data7.11□□□□□ -1.27not detected
UBA4YHR111W ARC15P40518 154 aaRIP-Chip data7.1□□□□□ -1.27not detected
UBA4YHR111W FSF1Q12029 327 aaKnown RBP7.1□□□□□ -1.27
UBA4YHR111W SVP26P38869 228 aa7.09□□□□□ -1.27
UBA4YHR111W YPR010C-AA5Z2X5 72 aa7.08□□□□□ -1.28
UBA4YHR111W DIF1O13577 133 aa7.08□□□□□ -1.28
UBA4YHR111W MRP49P32388 137 aa7.08□□□□□ -1.28
UBA4YHR111W RRT15Q3E811 62 aa7.08□□□□□ -1.28
UBA4YHR111W SAL1D6W196 494 aa7.07□□□□□ -1.28
UBA4YHR111W PET8P38921 284 aa7.07□□□□□ -1.28
UBA4YHR111W YDR115WQ04598 105 aa7.07□□□□□ -1.28
UBA4YHR111W WIP1Q2V2P8 89 aa7.07□□□□□ -1.28
UBA4YHR111W YMR320WQ04897 101 aa7.06□□□□□ -1.28
UBA4YHR111W SEC4P07560 215 aaKnown RBP7.05□□□□□ -1.28
UBA4YHR111W YBR013CP38215 129 aa7.05□□□□□ -1.28
UBA4YHR111W YIL059CP40520 121 aa7.05□□□□□ -1.28
UBA4YHR111W LCL2Q08045 131 aa7.05□□□□□ -1.28
UBA4YHR111W RPS22BQ3E7Y3 130 aaKnown RBP7.05□□□□□ -1.28
UBA4YHR111W YCR024C-BQ3E7Z8 88 aa7.05□□□□□ -1.28
UBA4YHR111W GLO1P50107 326 aa7.04□□□□□ -1.28
UBA4YHR111W FCF1Q05498 189 aaPredicted RBP7.04□□□□□ -1.28
UBA4YHR111W PAU19P0CE85 124 aa7.03□□□□□ -1.28
UBA4YHR111W PAU21P0CE86 164 aa7.03□□□□□ -1.28
UBA4YHR111W PAU22P0CE87 164 aa7.03□□□□□ -1.28
UBA4YHR111W PAU3P25610 124 aa7.03□□□□□ -1.28
UBA4YHR111W YKR070WP36151 352 aaKnown RBP7.03□□□□□ -1.28
UBA4YHR111W YBR209WP38311 105 aa7.03□□□□□ -1.28
UBA4YHR111W NSE4P43124 402 aa7.03□□□□□ -1.28
UBA4YHR111W HHO1P53551 258 aa7.03□□□□□ -1.28
UBA4YHR111W POR1P04840 283 aaKnown RBP7.02□□□□□ -1.28
UBA4YHR111W YER076CP40049 302 aa7.02□□□□□ -1.28
UBA4YHR111W YGL088WP53151 121 aa7.02□□□□□ -1.28
UBA4YHR111W ZEO1Q08245 113 aa7.02□□□□□ -1.28
UBA4YHR111W PFY1P07274 126 aa7.01□□□□□ -1.29
UBA4YHR111W ERG28P40030 148 aa7.01□□□□□ -1.29
UBA4YHR111W YPL229WQ99395 206 aa7.01□□□□□ -1.29
UBA4YHR111W RPL16AP26784 199 aaKnown RBP7.01□□□□□ -1.29
UBA4YHR111W MGR2Q02889 113 aa7.01□□□□□ -1.29
UBA4YHR111W AIM29P36154 155 aa7□□□□□ -1.29
UBA4YHR111W YPR014CQ6B0W2 109 aa7□□□□□ -1.29
UBA4YHR111W YAR023CD6VPM8 179 aa6.99□□□□□ -1.29
UBA4YHR111W ADH2P00331 348 aaKnown RBP6.99□□□□□ -1.29
UBA4YHR111W YJR146WP47174 117 aa6.99□□□□□ -1.29
UBA4YHR111W YIL014C-AQ02598 104 aa6.99□□□□□ -1.29
UBA4YHR111W BET5Q03630 159 aa6.99□□□□□ -1.29
UBA4YHR111W MRP10O75012 95 aa6.98□□□□□ -1.29
UBA4YHR111W ERG27Q12452 347 aaKnown RBP6.98□□□□□ -1.29
UBA4YHR111W TRP1P00912 224 aa6.97□□□□□ -1.29
Retrieved 100 of 5,963 RNA–protein pairs in 33 ms