RNA–Protein interactions for RNA: YGR253C

PUP2, Transcript of Alpha 5 subunit of the 20S proteasome, yeastyeast

Gene PUP2, Length 783 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PUP2YGR253C LCL1Q02786 101 aa4.85□□□□□ -1.63
PUP2YGR253C NAT3Q06504 195 aa4.85□□□□□ -1.63
PUP2YGR253C SNU23Q12368 194 aaPredicted RBP4.85□□□□□ -1.63
PUP2YGR253C YBR085C-AO43137 85 aa4.84□□□□□ -1.63
PUP2YGR253C RPB11P38902 120 aa4.84□□□□□ -1.63
PUP2YGR253C ERG28P40030 148 aa4.84□□□□□ -1.63
PUP2YGR253C PLP1Q04004 230 aa4.84□□□□□ -1.63
PUP2YGR253C TVP18Q04767 167 aa4.84□□□□□ -1.63
PUP2YGR253C RPL16AP26784 199 aaKnown RBP4.83□□□□□ -1.64
PUP2YGR253C DAD3P69850 94 aa4.83□□□□□ -1.64
PUP2YGR253C GPI19Q04082 140 aa4.83□□□□□ -1.64
PUP2YGR253C GIM5Q04493 163 aa4.83□□□□□ -1.64
PUP2YGR253C YDR029WQ12111 104 aa4.83□□□□□ -1.64
PUP2YGR253C SMT3Q12306 101 aaKnown RBP4.83□□□□□ -1.64
PUP2YGR253C RPL27AP0C2H6 136 aaKnown RBP4.82□□□□□ -1.64
PUP2YGR253C RPL42AP0CX27 106 aaKnown RBP4.82□□□□□ -1.64
PUP2YGR253C RPL42BP0CX28 106 aaKnown RBP4.82□□□□□ -1.64
PUP2YGR253C QRI5P32344 111 aa4.82□□□□□ -1.64
PUP2YGR253C MRP49P32388 137 aa4.82□□□□□ -1.64
PUP2YGR253C SRP14P38985 146 aa4.82□□□□□ -1.64
PUP2YGR253C THG1P53215 237 aaKnown RBP4.82□□□□□ -1.64
PUP2YGR253C ZRT1P32804 376 aa4.8□□□□□ -1.64
PUP2YGR253C MMS2P53152 137 aa4.8□□□□□ -1.64
PUP2YGR253C DCN1Q12395 269 aa4.8□□□□□ -1.64
PUP2YGR253C DCV1P43595 202 aa4.79□□□□□ -1.64
PUP2YGR253C SNA2P56508 79 aa4.79□□□□□ -1.64
PUP2YGR253C GTO3Q04806 366 aa4.79□□□□□ -1.64
PUP2YGR253C ARC18Q05933 178 aaKnown RBP4.79□□□□□ -1.64
PUP2YGR253C YBR298C-AQ8TGK4 73 aa4.79□□□□□ -1.64
PUP2YGR253C FMP49A0A023PZB3 126 aa4.78□□□□□ -1.64
PUP2YGR253C YBR209WP38311 105 aa4.78□□□□□ -1.64
PUP2YGR253C YAL064WP39711 94 aa4.78□□□□□ -1.64
PUP2YGR253C SNN1P48232 102 aa4.78□□□□□ -1.64
PUP2YGR253C YGL088WP53151 121 aa4.78□□□□□ -1.64
PUP2YGR253C MRPS9P38120 278 aa4.77□□□□□ -1.65
PUP2YGR253C SDH8P38345 138 aa4.77□□□□□ -1.65
PUP2YGR253C YLR194CQ05777 254 aa4.77□□□□□ -1.65
PUP2YGR253C DDR48P18899 430 aaKnown RBP4.76□□□□□ -1.65
PUP2YGR253C SMP1P38128 452 aa4.76□□□□□ -1.65
PUP2YGR253C YBL081WP38180 368 aaKnown RBP4.76□□□□□ -1.65
PUP2YGR253C PAU7P39545 55 aa4.76□□□□□ -1.65
PUP2YGR253C PHS1P40857 217 aa4.76□□□□□ -1.65
PUP2YGR253C CIN5P40917 295 aa4.76□□□□□ -1.65
PUP2YGR253C PAU5P43575 122 aa4.76□□□□□ -1.65
PUP2YGR253C YGR149WP48236 432 aa4.76□□□□□ -1.65
PUP2YGR253C SOH1P38633 127 aa4.75□□□□□ -1.65
PUP2YGR253C SEC72P39742 193 aaKnown RBP4.75□□□□□ -1.65
PUP2YGR253C RPC10P40422 70 aa4.75□□□□□ -1.65
PUP2YGR253C OST3P48439 350 aa4.75□□□□□ -1.65
PUP2YGR253C VMA7P39111 118 aa4.74□□□□□ -1.65
PUP2YGR253C HMRA1P0CY11 126 aa4.73□□□□□ -1.65
PUP2YGR253C AIM29P36154 155 aa4.73□□□□□ -1.65
PUP2YGR253C YER076CP40049 302 aa4.73□□□□□ -1.65
PUP2YGR253C YER085CP40058 173 aa4.73□□□□□ -1.65
PUP2YGR253C BNS1P50084 137 aa4.73□□□□□ -1.65
PUP2YGR253C VMA9Q3E7B6 73 aa4.73□□□□□ -1.65
PUP2YGR253C YKR032WP36127 104 aa4.72□□□□□ -1.65
PUP2YGR253C POM33Q12164 279 aa4.72□□□□□ -1.65
PUP2YGR253C YDR010CQ12426 110 aa4.72□□□□□ -1.65
PUP2YGR253C ENV10Q99382 181 aa4.72□□□□□ -1.65
PUP2YGR253C YGL010WP25338 174 aa4.71□□□□□ -1.66
PUP2YGR253C PAM17P36147 197 aa4.71□□□□□ -1.66
PUP2YGR253C RPL32P38061 130 aaKnown RBP4.71□□□□□ -1.66
PUP2YGR253C PEX22P39718 180 aa4.71□□□□□ -1.66
PUP2YGR253C GLO1P50107 326 aa4.71□□□□□ -1.66
PUP2YGR253C SDS23P53172 527 aa4.71□□□□□ -1.66
PUP2YGR253C YNR034W-AQ3E841 98 aa4.71□□□□□ -1.66
PUP2YGR253C ADH2P00331 348 aaKnown RBP4.7□□□□□ -1.66
PUP2YGR253C YKR070WP36151 352 aaKnown RBP4.7□□□□□ -1.66
PUP2YGR253C YIL024CP40543 189 aa4.7□□□□□ -1.66
PUP2YGR253C UBC12P52491 188 aa4.7□□□□□ -1.66
PUP2YGR253C FMP16Q12497 93 aa4.7□□□□□ -1.66
PUP2YGR253C LAC1P28496 418 aa4.69□□□□□ -1.66
PUP2YGR253C LDS1P31379 325 aa4.69□□□□□ -1.66
PUP2YGR253C AIM19P40502 157 aa4.69□□□□□ -1.66
PUP2YGR253C YLR118CQ12354 227 aa4.69□□□□□ -1.66
PUP2YGR253C YCL021W-AQ96VH3 125 aa4.69□□□□□ -1.66
PUP2YGR253C Q0142Q9ZZW4 58 aa4.69□□□□□ -1.66
PUP2YGR253C RPL23AP0CX41 137 aaKnown RBP4.68□□□□□ -1.66
PUP2YGR253C RPL23BP0CX42 137 aaKnown RBP4.68□□□□□ -1.66
PUP2YGR253C YBR219CP38317 127 aa4.68□□□□□ -1.66
PUP2YGR253C HSP10P38910 106 aa4.68□□□□□ -1.66
PUP2YGR253C ATP14Q12349 124 aa4.68□□□□□ -1.66
PUP2YGR253C TRP1P00912 224 aa4.67□□□□□ -1.66
PUP2YGR253C DAD2P36162 133 aa4.67□□□□□ -1.66
PUP2YGR253C PET8P38921 284 aa4.67□□□□□ -1.66
PUP2YGR253C YEL008WP40001 126 aa4.67□□□□□ -1.66
PUP2YGR253C YJR146WP47174 117 aa4.67□□□□□ -1.66
PUP2YGR253C APS2Q00381 147 aa4.67□□□□□ -1.66
PUP2YGR253C YBL112CQ3E7Y4 105 aa4.67□□□□□ -1.66
PUP2YGR253C VTC1P40046 129 aaRIP-Chip data4.66□□□□□ -1.66not detected
PUP2YGR253C DAN1P47178 298 aa4.66□□□□□ -1.66
PUP2YGR253C YMR175W-AQ3E766 64 aa4.66□□□□□ -1.66
PUP2YGR253C ECM12O13529 151 aa4.65□□□□□ -1.67
PUP2YGR253C HYP2P23301 157 aaKnown RBP4.65□□□□□ -1.67
PUP2YGR253C SRB6P32570 121 aa4.65□□□□□ -1.67
PUP2YGR253C NTF2P33331 125 aaKnown RBP4.65□□□□□ -1.67
PUP2YGR253C MHR1Q06630 226 aa4.65□□□□□ -1.67
PUP2YGR253C FSF1Q12029 327 aaKnown RBP4.65□□□□□ -1.67
PUP2YGR253C WIP1Q2V2P8 89 aa4.65□□□□□ -1.67
Retrieved 100 of 5,963 RNA–protein pairs in 39.6 ms