RNA–Protein interactions for RNA: YGR239C

PEX21, Transcript of Peroxin required for peroxisomal matrix protein targeting, yeastyeast

Gene PEX21, Length 867 nt, Biotype protein coding, Subcellular localisation Peroxisome .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEX21YGR239C GPI11Q06636 219 aa1.85□□□□□ -2.11
PEX21YGR239C YPR203WQ08994 102 aa1.85□□□□□ -2.11
PEX21YGR239C YNL277W-AQ3E7Z0 62 aa1.85□□□□□ -2.11
PEX21YGR239C NUP192P47054 1683 aa1.84□□□□□ -2.11
PEX21YGR239C YBR027CP38220 110 aa1.84□□□□□ -2.11
PEX21YGR239C HPM1P40481 377 aa1.84□□□□□ -2.11
PEX21YGR239C TMA23Q03525 211 aa1.84□□□□□ -2.11
PEX21YGR239C YOR385WQ08909 290 aa1.84□□□□□ -2.11
PEX21YGR239C RPL14AP36105 138 aaKnown RBP1.83□□□□□ -2.12
PEX21YGR239C RPL14BP38754 138 aaKnown RBP1.83□□□□□ -2.12
PEX21YGR239C YAR064WP39563 99 aa1.83□□□□□ -2.12
PEX21YGR239C LSM8P47093 109 aaKnown RBP1.83□□□□□ -2.12
PEX21YGR239C SED1Q01589 338 aa1.83□□□□□ -2.12
PEX21YGR239C YMR007WQ03675 126 aa1.83□□□□□ -2.12
PEX21YGR239C SNF2P22082 1703 aa1.83□□□□□ -2.12
PEX21YGR239C RPS20P38701 121 aaKnown RBP1.82□□□□□ -2.12
PEX21YGR239C ROM2P51862 1356 aaKnown RBP1.82□□□□□ -2.12
PEX21YGR239C SRB8P25648 1427 aa1.82□□□□□ -2.12
PEX21YGR239C URB1P34241 1764 aaKnown RBP1.81□□□□□ -2.12
PEX21YGR239C FMP49A0A023PZB3 126 aa1.81□□□□□ -2.12
PEX21YGR239C DCV1P43595 202 aa1.81□□□□□ -2.12
PEX21YGR239C RSF2P46974 1380 aa1.81□□□□□ -2.12
PEX21YGR239C YCL001W-AP87012 153 aa1.8□□□□□ -2.12
PEX21YGR239C FKS3Q04952 1785 aa1.8□□□□□ -2.12
PEX21YGR239C TRS20P38334 175 aa1.79□□□□□ -2.12
PEX21YGR239C TIM8P57744 87 aa1.79□□□□□ -2.12
PEX21YGR239C DYN2Q02647 92 aa1.79□□□□□ -2.12
PEX21YGR239C ELC1Q03071 99 aa1.79□□□□□ -2.12
PEX21YGR239C KRE5P22023 1365 aa1.78□□□□□ -2.12
PEX21YGR239C RPL33AP05744 107 aaKnown RBP1.78□□□□□ -2.12
PEX21YGR239C SRL3P36167 246 aa1.78□□□□□ -2.12
PEX21YGR239C BRP1P53194 125 aa1.78□□□□□ -2.12
PEX21YGR239C ATP14Q12349 124 aa1.78□□□□□ -2.12
PEX21YGR239C Q0144Q9ZZW2 109 aa1.78□□□□□ -2.12
PEX21YGR239C TY4B-HP0C2J7 1802 aa1.77□□□□□ -2.13
PEX21YGR239C TY4B-JP47024 1803 aa1.77□□□□□ -2.13
PEX21YGR239C TY3B-IQ7LHG5 1498 aaKnown RBP1.77□□□□□ -2.13
PEX21YGR239C MRPL44P19956 98 aa1.77□□□□□ -2.13
PEX21YGR239C YCR050CP25630 102 aa1.77□□□□□ -2.13
PEX21YGR239C RPS1AP33442 255 aaKnown RBP1.77□□□□□ -2.13
PEX21YGR239C VMA10P48836 114 aaKnown RBP1.77□□□□□ -2.13
PEX21YGR239C YGR017WP53210 297 aa1.77□□□□□ -2.13
PEX21YGR239C NAT5Q08689 176 aa1.77□□□□□ -2.13
PEX21YGR239C YIL102CP40488 101 aa1.76□□□□□ -2.13
PEX21YGR239C PHS1P40857 217 aa1.76□□□□□ -2.13
PEX21YGR239C SFT1P43682 97 aa1.76□□□□□ -2.13
PEX21YGR239C CNL1Q06333 122 aa1.76□□□□□ -2.13
PEX21YGR239C TOM1Q03280 3268 aa1.75□□□□□ -2.13
PEX21YGR239C APC1P53886 1748 aa1.75□□□□□ -2.13
PEX21YGR239C QCR10P37299 77 aa1.75□□□□□ -2.13
PEX21YGR239C SFT2P38166 215 aa1.75□□□□□ -2.13
PEX21YGR239C RPL37AP49166 88 aaKnown RBP1.75□□□□□ -2.13
PEX21YGR239C YGL014C-AP0C5N1 53 aa1.74□□□□□ -2.13
PEX21YGR239C YAL064WP39711 94 aa1.74□□□□□ -2.13
PEX21YGR239C YNL122CP53921 115 aaPredicted RBP1.74□□□□□ -2.13
PEX21YGR239C SDH7Q04401 133 aa1.74□□□□□ -2.13
PEX21YGR239C CCW12Q12127 133 aa1.74□□□□□ -2.13
PEX21YGR239C SLO1Q3E784 85 aa1.74□□□□□ -2.13
PEX21YGR239C ANB1P19211 157 aa1.73□□□□□ -2.13
PEX21YGR239C ATG8P38182 117 aaRIP-Chip data1.73□□□□□ -2.13not detected
PEX21YGR239C GAT4P40569 121 aa1.73□□□□□ -2.13
PEX21YGR239C YLR419WQ06698 1435 aaKnown RBP1.73□□□□□ -2.13
PEX21YGR239C NMT1P14743 455 aa1.72□□□□□ -2.13
PEX21YGR239C HYM1P32464 399 aa1.72□□□□□ -2.13
PEX21YGR239C YPL067CQ02754 198 aa1.72□□□□□ -2.13
PEX21YGR239C TVP18Q04767 167 aa1.72□□□□□ -2.13
PEX21YGR239C RAD50P12753 1312 aa1.71□□□□□ -2.14
PEX21YGR239C FIG2P25653 1609 aa1.71□□□□□ -2.14
PEX21YGR239C TOR1P35169 2470 aa1.71□□□□□ -2.14
PEX21YGR239C PAU21P0CE86 164 aa1.71□□□□□ -2.14
PEX21YGR239C PAU22P0CE87 164 aa1.71□□□□□ -2.14
PEX21YGR239C FUN14P18411 198 aa1.71□□□□□ -2.14
PEX21YGR239C MHF1Q3E835 90 aa1.71□□□□□ -2.14
PEX21YGR239C RIM15P43565 1770 aa1.71□□□□□ -2.14
PEX21YGR239C YPR117WQ06116 2489 aa1.71□□□□□ -2.14
PEX21YGR239C YHR213WP0CI67 198 aa1.7□□□□□ -2.14
PEX21YGR239C YRF1-3P0CX14 1859 aa1.7□□□□□ -2.14
PEX21YGR239C YRF1-7P0CX15 1859 aa1.7□□□□□ -2.14
PEX21YGR239C LST8P41318 303 aa1.7□□□□□ -2.14
PEX21YGR239C MPC1P53157 130 aaKnown RBP1.7□□□□□ -2.14
PEX21YGR239C YRF1-6P53819 1859 aa1.7□□□□□ -2.14
PEX21YGR239C SEN15Q04675 128 aa1.7□□□□□ -2.14
PEX21YGR239C YCR001WP25347 104 aa1.69□□□□□ -2.14
PEX21YGR239C YMR122CQ03879 124 aa1.69□□□□□ -2.14
PEX21YGR239C YLR296WQ05898 108 aa1.69□□□□□ -2.14
PEX21YGR239C YOL013W-AP0C272 63 aaPredicted RBP1.68□□□□□ -2.14
PEX21YGR239C NKP2Q06162 153 aa1.68□□□□□ -2.14
PEX21YGR239C YOR072WQ08486 104 aa1.68□□□□□ -2.14
PEX21YGR239C HAP2P06774 265 aa1.67□□□□□ -2.14
PEX21YGR239C YJL009WP47078 108 aa1.67□□□□□ -2.14
PEX21YGR239C MRP49P32388 137 aa1.66□□□□□ -2.14
PEX21YGR239C YGL149WP53116 101 aa1.66□□□□□ -2.14
PEX21YGR239C IRC21Q04772 201 aa1.66□□□□□ -2.14
PEX21YGR239C NUM1Q00402 2748 aa1.66□□□□□ -2.14
PEX21YGR239C UTP10P42945 1769 aaKnown RBP1.65□□□□□ -2.14
PEX21YGR239C RTC6O14464 93 aa1.65□□□□□ -2.15
PEX21YGR239C RPL40AP0CH08 128 aaKnown RBP1.65□□□□□ -2.15
PEX21YGR239C RPL40BP0CH09 128 aaKnown RBP1.65□□□□□ -2.15
PEX21YGR239C HAP3P13434 144 aa1.65□□□□□ -2.15
PEX21YGR239C MRPL11P36521 249 aaPredicted RBP1.65□□□□□ -2.15
Retrieved 100 of 5,963 RNA–protein pairs in 107.3 ms