RNA–Protein interactions for RNA: YGL079W

KXD1, Transcript of Subunit of the BLOC-1 complex involved in endosomal maturation, yeastyeast

Gene KXD1, Length 657 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
KXD1YGL079W YGL010WP25338 174 aa2.06□□□□□ -2.08
KXD1YGL079W YMR090WQ04304 227 aaKnown RBP2.06□□□□□ -2.08
KXD1YGL079W FIT1Q04433 528 aa2.06□□□□□ -2.08
KXD1YGL079W SCP1Q08873 200 aa2.06□□□□□ -2.08
KXD1YGL079W YGL194C-AQ2V2P6 80 aa2.06□□□□□ -2.08
KXD1YGL079W MED11Q99278 115 aa2.06□□□□□ -2.08
KXD1YGL079W PDR11P40550 1411 aa2.06□□□□□ -2.08
KXD1YGL079W GEA1P47102 1408 aaPredicted RBP2.06□□□□□ -2.08
KXD1YGL079W MRPL11P36521 249 aaPredicted RBP2.05□□□□□ -2.08
KXD1YGL079W COA3Q3E7B2 85 aa2.05□□□□□ -2.08
KXD1YGL079W TY1B-DR4Q07793 1604 aa2.05□□□□□ -2.08
KXD1YGL079W FAS2P19097 1887 aaKnown RBP2.05□□□□□ -2.08
KXD1YGL079W YMR103CQ04436 120 aa2.04□□□□□ -2.08
KXD1YGL079W MMS1Q06211 1407 aa2.04□□□□□ -2.08
KXD1YGL079W YLR365WQ7LIF2 110 aa2.04□□□□□ -2.08
KXD1YGL079W YHR213W-AQ8TGT4 77 aa2.04□□□□□ -2.08
KXD1YGL079W MYO4P32492 1471 aa2.03□□□□□ -2.08
KXD1YGL079W RPL36BO14455 100 aaKnown RBP2.03□□□□□ -2.08
KXD1YGL079W RPL36AP05745 100 aaPredicted RBP2.03□□□□□ -2.08
KXD1YGL079W EMP24P32803 203 aaKnown RBP2.03□□□□□ -2.08
KXD1YGL079W YBR027CP38220 110 aa2.03□□□□□ -2.08
KXD1YGL079W YFL065CP43539 102 aa2.03□□□□□ -2.08
KXD1YGL079W COA4Q05809 96 aa2.03□□□□□ -2.08
KXD1YGL079W TY1B-NL2Q99337 1749 aaKnown RBP2.03□□□□□ -2.09
KXD1YGL079W FPR1P20081 114 aaKnown RBP2.02□□□□□ -2.09
KXD1YGL079W YCL042WP25572 119 aa2.02□□□□□ -2.09
KXD1YGL079W ATG8P38182 117 aaRIP-Chip data2.02□□□□□ -2.09not detected
KXD1YGL079W VAM10Q08474 114 aa2.02□□□□□ -2.09
KXD1YGL079W YPL261CQ08976 102 aa2.02□□□□□ -2.09
KXD1YGL079W COA6Q3E846 104 aa2.02□□□□□ -2.09
KXD1YGL079W SSK2P53599 1579 aa2.02□□□□□ -2.09
KXD1YGL079W RTC6O14464 93 aa2.01□□□□□ -2.09
KXD1YGL079W RPL40AP0CH08 128 aaKnown RBP2.01□□□□□ -2.09
KXD1YGL079W RPL40BP0CH09 128 aaKnown RBP2.01□□□□□ -2.09
KXD1YGL079W YHR213WP0CI67 198 aa2.01□□□□□ -2.09
KXD1YGL079W SED1Q01589 338 aa2.01□□□□□ -2.09
KXD1YGL079W YLR296WQ05898 108 aa2.01□□□□□ -2.09
KXD1YGL079W FIT3Q08907 204 aa2.01□□□□□ -2.09
KXD1YGL079W DAD1Q12248 94 aa2.01□□□□□ -2.09
KXD1YGL079W YSP2Q06681 1438 aa2□□□□□ -2.09
KXD1YGL079W TY1B-DR5P0C2I2 1755 aa2□□□□□ -2.09
KXD1YGL079W TY1B-DR6P0C2I3 1755 aa2□□□□□ -2.09
KXD1YGL079W TY1B-LR2P0C2I5 1755 aa2□□□□□ -2.09
KXD1YGL079W TY1B-LR3P0C2I6 1755 aaKnown RBP2□□□□□ -2.09
KXD1YGL079W TY1B-PR1P0C2I9 1755 aaKnown RBP2□□□□□ -2.09
KXD1YGL079W TY1B-PR3P0C2J1 1755 aaKnown RBP2□□□□□ -2.09
KXD1YGL079W TY1B-JR1P47098 1755 aa2□□□□□ -2.09
KXD1YGL079W TY1B-ML2Q03434 1755 aaKnown RBP2□□□□□ -2.09
KXD1YGL079W TY1B-ER1Q03612 1755 aa2□□□□□ -2.09
KXD1YGL079W TY1B-ML1Q04711 1755 aaKnown RBP2□□□□□ -2.09
KXD1YGL079W TY1B-GR2Q12269 1755 aa2□□□□□ -2.09
KXD1YGL079W TY1B-OLQ12273 1755 aa2□□□□□ -2.09
KXD1YGL079W TY1B-GR3Q12316 1755 aa2□□□□□ -2.09
KXD1YGL079W TY1B-PLQ12414 1755 aaKnown RBP2□□□□□ -2.09
KXD1YGL079W TY1B-ORQ92393 1755 aa2□□□□□ -2.09
KXD1YGL079W ECM12O13529 151 aa2□□□□□ -2.09
KXD1YGL079W RPL33AP05744 107 aaKnown RBP2□□□□□ -2.09
KXD1YGL079W PFY1P07274 126 aa2□□□□□ -2.09
KXD1YGL079W YGL014C-AP0C5N1 53 aa2□□□□□ -2.09
KXD1YGL079W YER187WP40102 141 aa2□□□□□ -2.09
KXD1YGL079W HPA2Q06592 156 aa2□□□□□ -2.09
KXD1YGL079W OST5Q92316 86 aa2□□□□□ -2.09
KXD1YGL079W SEC7P11075 2009 aaKnown RBP2□□□□□ -2.09
KXD1YGL079W SRB8P25648 1427 aa2□□□□□ -2.09
KXD1YGL079W MYO1P08964 1928 aa1.99□□□□□ -2.09
KXD1YGL079W MON2P48563 1636 aaPredicted RBP1.99□□□□□ -2.09
KXD1YGL079W ESP1Q03018 1630 aa1.99□□□□□ -2.09
KXD1YGL079W MLP1Q02455 1875 aaKnown RBP1.99□□□□□ -2.09
KXD1YGL079W PDR10P51533 1564 aa1.99□□□□□ -2.09
KXD1YGL079W PAI3P01094 68 aa1.99□□□□□ -2.09
KXD1YGL079W LSM2P38203 95 aaKnown RBP1.99□□□□□ -2.09
KXD1YGL079W SWM2P40342 146 aa1.99□□□□□ -2.09
KXD1YGL079W MSL1P40567 111 aaPredicted RBP1.99□□□□□ -2.09
KXD1YGL079W LST8P41318 303 aa1.99□□□□□ -2.09
KXD1YGL079W PAU12P53343 120 aa1.99□□□□□ -2.09
KXD1YGL079W YDR029WQ12111 104 aa1.99□□□□□ -2.09
KXD1YGL079W TY2B-LR1P0C2J3 1770 aa1.99□□□□□ -2.09
KXD1YGL079W TY2B-FP0CX63 1770 aa1.99□□□□□ -2.09
KXD1YGL079W TY2B-GR2P0CX64 1770 aa1.99□□□□□ -2.09
KXD1YGL079W TY2B-CP25384 1770 aa1.99□□□□□ -2.09
KXD1YGL079W TY2B-DR2Q03494 1770 aa1.99□□□□□ -2.09
KXD1YGL079W TY2B-DR3Q07791 1770 aaKnown RBP1.99□□□□□ -2.09
KXD1YGL079W TY2B-OR1Q12113 1770 aa1.99□□□□□ -2.09
KXD1YGL079W TY2B-DR1Q12472 1770 aa1.99□□□□□ -2.09
KXD1YGL079W TY2B-BQ12491 1770 aa1.99□□□□□ -2.09
KXD1YGL079W TY2B-OR2Q12501 1770 aa1.99□□□□□ -2.09
KXD1YGL079W SCC2Q04002 1493 aa1.99□□□□□ -2.09
KXD1YGL079W VMA21P41806 77 aa1.98□□□□□ -2.09
KXD1YGL079W HUR1P45820 110 aa1.98□□□□□ -2.09
KXD1YGL079W RSM19P53733 91 aaPredicted RBP1.98□□□□□ -2.09
KXD1YGL079W YIL014C-AQ02598 104 aa1.98□□□□□ -2.09
KXD1YGL079W YMR122CQ03879 124 aa1.98□□□□□ -2.09
KXD1YGL079W YLR194CQ05777 254 aa1.98□□□□□ -2.09
KXD1YGL079W YPR203WQ08994 102 aa1.98□□□□□ -2.09
KXD1YGL079W YOS1Q3E834 85 aa1.98□□□□□ -2.09
KXD1YGL079W TY1B-JR2P47100 1755 aaKnown RBP1.98□□□□□ -2.09
KXD1YGL079W TY1B-ER2Q03619 1755 aa1.98□□□□□ -2.09
KXD1YGL079W TY1B-MR1Q04214 1755 aa1.98□□□□□ -2.09
KXD1YGL079W TY1B-MR2Q04670 1755 aaKnown RBP1.98□□□□□ -2.09
KXD1YGL079W TY1B-LR1Q12088 1755 aaKnown RBP1.98□□□□□ -2.09
Retrieved 100 of 5,963 RNA–protein pairs in 35 ms